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The PathOlogist: an automated tool for pathway-centric analysis
by
Greenblum, Sharon I
,
Efroni, Sol
,
Schaefer, Carl F
,
Buetow, Ken H
Published in
BMC bioinformatics
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Cancers as wounds that do not heal : Differences and similarities between renal regeneration/repair and renal cell carcinoma
by
RISS, Joseph
,
KHANNA, Chand
,
LIMING YANG
,
POWELL, John
,
KANE, David W
,
STAR, Robert A
,
APRELIKOVA, Olga
,
BAUER, Kristin
,
VASSELLI, James R
,
MARANCHIE, Jodi K
,
KOHN, Kurt W
,
BUETOW, Ken H
,
KOO, Seongjoon
,
LINEHAN, W. Marston
,
WEINSTEIN, John N
,
LEE, Maxwell P
,
KLAUSNER, Richard D
,
BARRETT, J. Carl
,
CHANDRAMOULI, Gadisetti V. R
,
YANG, Howard H
,
YING HU
,
KLEINER, David E
,
ROSENWALD, Andreas
,
SCHAEFER, Carl F
,
BEN-SASSON, Shmuel A
Published in
Cancer research (Chicago, Ill.)
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Abstract A6: microRNA sequencing of AKXD recombinant inbred panel identifies miR-216b as a candidate metastasis suppressor in a murine model of breast cancer
by
Faraji, Farhoud
,
Hu, Ying
,
Goldberger, Natalie
,
Wu, Gang
,
Buetow, Ken H.
,
Zhang, Jinghui
,
Hunter, Kent W.
Published in
Cancer research (Chicago, Ill.)
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The BioPAX community standard for pathway data sharing
by
Bader, Gary D
,
Demir, Emek
,
Cary, Michael P
,
Paley, Suzanne
,
Fukuda, Ken
,
Lemer, Christian
,
Vastrik, Imre
,
Wu, Guanming
,
D'Eustachio, Peter
,
Schaefer, Carl
,
Luciano, Joanne
,
Schacherer, Frank
,
Martinez-Flores, Irma
,
Hu, Zhenjun
,
Jimenez-Jacinto, Veronica
,
Joshi-Tope, Geeta
,
Kandasamy, Kumaran
,
Lopez-Fuentes, Alejandra C
,
Mi, Huaiyu
,
Pichler, Elgar
,
Rodchenkov, Igor
,
Splendiani, Andrea
,
Tkachev, Sasha
,
Zucker, Jeremy
,
Gopinath, Gopal
,
Rajasimha, Harsha
,
Ramakrishnan, Ranjani
,
Shah, Imran
,
Syed, Mustafa
,
Anwar, Nadia
,
Babur, Özgün
,
Blinov, Michael
,
Brauner, Erik
,
Corwin, Dan
,
Donaldson, Sylva
,
Gibbons, Frank
,
Goldberg, Robert
,
Hornbeck, Peter
,
Luna, Augustin
,
Murray-Rust, Peter
,
Neumann, Eric
,
Reubenacker, Oliver
,
Samwald, Matthias
,
van Iersel, Martijn
,
Wimalaratne, Sarala
,
Allen, Keith
,
Braun, Burk
,
Whirl-Carrillo, Michelle
,
Cheung, Kei-Hoi
,
Dahlquist, Kam
,
Finney, Andrew
,
Gillespie, Marc
,
Glass, Elizabeth
,
Gong, Li
,
Haw, Robin
,
Honig, Michael
,
Hubaut, Olivier
,
Kane, David
,
Krupa, Shiva
,
Kutmon, Martina
,
Leonard, Julie
,
Marks, Debbie
,
Merberg, David
,
Petri, Victoria
,
Pico, Alex
,
Ravenscroft, Dean
,
Ren, Liya
,
Shah, Nigam
,
Sunshine, Margot
,
Tang, Rebecca
,
Whaley, Ryan
,
Letovksy, Stan
,
Buetow, Kenneth H
,
Rzhetsky, Andrey
,
Schachter, Vincent
,
Sobral, Bruno S
,
Dogrusoz, Ugur
,
McWeeney, Shannon
,
Aladjem, Mirit
,
Birney, Ewan
,
Collado-Vides, Julio
,
Goto, Susumu
,
Hucka, Michael
,
Novère, Nicolas Le
,
Maltsev, Natalia
,
Pandey, Akhilesh
,
Thomas, Paul
,
Wingender, Edgar
,
Karp, Peter D
,
Sander, Chris
Published in
Nature biotechnology
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Lack of Somatic Sequence Mutations In Protein Tyrosine Kinase Genes Other Than the JAK Kinase Family In High Risk B-Precursor Childhood Acute Lymphoblastic Leukemia (ALL): A Report...
by
Zhang, Jinghui
,
Mullighan, Charles
,
Harvey, Richard
,
Carroll, William L.
,
Chen, I-Ming L.
,
Devidas, Meenakshi
,
Larsen, Eric
,
Edmonson, Michael
,
Buetow, Ken
,
Gerhard, Daniela S
,
Loh, Mignon L.
,
Reaman, Gregory H.
,
Relling, Mary V.
,
Smith, Malcolm A
,
Downing, James R.
,
Willman, Cheryl L.
,
Hunger, Stephen
Published in
Blood
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Erratum: Corrigendum: The BioPAX community standard for pathway data sharing
by
Demir, Emek
,
Cary, Michael P
,
Paley, Suzanne
,
Fukuda, Ken
,
Lemer, Christian
,
Vastrik, Imre
,
Wu, Guanming
,
D'Eustachio, Peter
,
Schaefer, Carl
,
Luciano, Joanne
,
Schacherer, Frank
,
Martinez-Flores, Irma
,
Hu, Zhenjun
,
Jimenez-Jacinto, Veronica
,
Joshi-Tope, Geeta
,
Kandasamy, Kumaran
,
Lopez-Fuentes, Alejandra C
,
Mi, Huaiyu
,
Pichler, Elgar
,
Rodchenkov, Igor
,
Splendiani, Andrea
,
Tkachev, Sasha
,
Zucker, Jeremy
,
Gopinath, Gopal
,
Rajasimha, Harsha
,
Ramakrishnan, Ranjani
,
Shah, Imran
,
Syed, Mustafa
,
Anwar, Nadia
,
Babur, Özgün
,
Blinov, Michael
,
Brauner, Erik
,
Corwin, Dan
,
Donaldson, Sylva
,
Gibbons, Frank
,
Goldberg, Robert
,
Hornbeck, Peter
,
Luna, Augustin
,
Murray-Rust, Peter
,
Neumann, Eric
,
Reubenacker, Oliver
,
Samwald, Matthias
,
van Iersel, Martijn
,
Wimalaratne, Sarala
,
Allen, Keith
,
Braun, Burk
,
Whirl-Carrillo, Michelle
,
Cheung, Kei-Hoi
,
Dahlquist, Kam
,
Finney, Andrew
,
Gillespie, Marc
,
Glass, Elizabeth
,
Gong, Li
,
Haw, Robin
,
Honig, Michael
,
Hubaut, Olivier
,
Kane, David
,
Krupa, Shiva
,
Kutmon, Martina
,
Leonard, Julie
,
Marks, Debbie
,
Merberg, David
,
Petri, Victoria
,
Pico, Alex
,
Ravenscroft, Dean
,
Ren, Liya
,
Shah, Nigam
,
Sunshine, Margot
,
Tang, Rebecca
,
Whaley, Ryan
,
Letovksy, Stan
,
Buetow, Kenneth H
,
Rzhetsky, Andrey
,
Schachter, Vincent
,
Sobral, Bruno S
,
Dogrusoz, Ugur
,
McWeeney, Shannon
,
Aladjem, Mirit
,
Birney, Ewan
,
Collado-Vides, Julio
,
Goto, Susumu
,
Hucka, Michael
,
Le Novère, Nicolas
,
Maltsev, Natalia
,
Pandey, Akhilesh
,
Thomas, Paul
,
Wingender, Edgar
,
Karp, Peter D
,
Sander, Chris
,
Bader, Gary D
Published in
Nature biotechnology
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Corrigendum: the BioPAX community standard for pathway data sharing
by
Demir, Emek
,
Cary, Michael P
,
Paley, Suzanne
,
Fukuda, Ken
,
Lemer, Christian
,
Vastrik, Imre
,
Wu, Guanming
,
D'eustachio, Peter
,
Schaefer, Carl
,
Luciano, Joanne
,
Schacherer, Frank
,
Martinez-flores, Irma
,
Hu, Zhenjun
,
Jimenez-jacinto, Veronica
,
Joshi-tope, Geeta
,
Kandasamy, Kumaran
,
Lopez-fuentes, Alejandra C
,
Mi, Huaiyu
,
Pichler, Elgar
,
Rodchenkov, Igor
,
Splendiani, Andrea
,
Tkachev, Sasha
,
Zucker, Jeremy
,
Gopinath, Gopal
,
Rajasimha, Harsha
,
Ramakrishnan, Ranjani
,
Shah, Imran
,
Syed, Mustafa
,
Anwar, Nadia
,
Babur, Özgün
,
Blinov, Michael
,
Brauner, Erik
,
Corwin, Dan
,
Donaldson, Sylva
,
Gibbons, Frank
,
Goldberg, Robert
,
Hornbeck, Peter
,
Luna, Augustin
,
Murray-rust, Peter
,
Neumann, Eric
,
Reubenacker, Oliver
,
Samwald, Matthias
,
Van Iersel, Martijn
,
Wimalaratne, Sarala
,
Allen, Keith
,
Braun, Burk
,
Whirl-carrillo, Michelle
,
Cheung, Kei-hoi
,
Dahlquist, Kam
,
Finney, Andrew
,
Gillespie, Marc
,
Glass, Elizabeth
,
Gong, Li
,
Haw, Robin
,
Honig, Michael
,
Hubaut, Olivier
,
Kane, David
,
Krupa, Shiva
,
Kutmon, Martina
,
Leonard, Julie
,
Marks, Debbie
,
Merberg, David
,
Petri, Victoria
,
Pico, Alex
,
Ravenscroft, Dean
,
Ren, Liya
,
Shah, Nigam
,
Sunshine, Margot
,
Tang, Rebecca
,
Whaley, Ryan
,
Letovksy, Stan
,
Buetow, Kenneth H
,
Rzhetsky, Andrey
,
Schachter, Vincent
,
Sobral, Bruno S
,
Dogrusoz, Ugur
,
Mcweeney, Shannon
,
Aladjem, Mirit
,
Birney, Ewan
,
Collado-vides, Julio
,
Goto, Susumu
,
Hucka, Michael
,
Le Novère, Nicolas
,
Maltsev, Natalia
,
Pandey, Akhilesh
,
Thomas, Paul
,
Wingender, Edgar
,
Karp, Peter D
,
Sander, Chris
,
Bader, Gary D
Published in
Nature biotechnology
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Article
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8
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Correction: Corrigendum: The BioPAX community standard for pathway data sharing
by
Demir, Emek
,
Cary, Michael P
,
Paley, Suzanne
,
Fukuda, Ken
,
Lemer, Christian
,
Vastrik, Imre
,
Wu, Guanming
,
D'Eustachio, Peter
,
Schaefer, Carl
,
Luciano, Joanne
,
Schacherer, Frank
,
Martinez-Flores, Irma
,
Hu, Zhenjun
,
Jimenez-Jacinto, Veronica
,
Joshi-Tope, Geeta
,
Kandasamy, Kumaran
,
Lopez-Fuentes, Alejandra C
,
Mi, Huaiyu
,
Pichler, Elgar
,
Rodchenkov, Igor
,
Splendiani, Andrea
,
Tkachev, Sasha
,
Zucker, Jeremy
,
Gopinath, Gopal
,
Rajasimha, Harsha
,
Ramakrishnan, Ranjani
,
Shah, Imran
,
Syed, Mustafa
,
Anwar, Nadia
,
Babur, Özgün
,
Blinov, Michael
,
Brauner, Erik
,
Corwin, Dan
,
Donaldson, Sylva
,
Gibbons, Frank
,
Goldberg, Robert
,
Hornbeck, Peter
,
Luna, Augustin
,
Murray-Rust, Peter
,
Neumann, Eric
,
Reubenacker, Oliver
,
Samwald, Matthias
,
van Iersel, Martijn
,
Wimalaratne, Sarala
,
Allen, Keith
,
Braun, Burk
,
Whirl-Carrillo, Michelle
,
Cheung, Kei-Hoi
,
Dahlquist, Kam
,
Finney, Andrew
,
Gillespie, Marc
,
Glass, Elizabeth
,
Gong, Li
,
Haw, Robin
,
Honig, Michael
,
Hubaut, Olivier
,
Kane, David
,
Krupa, Shiva
,
Kutmon, Martina
,
Leonard, Julie
,
Marks, Debbie
,
Merberg, David
,
Petri, Victoria
,
Pico, Alex
,
Ravenscroft, Dean
,
Ren, Liya
,
Shah, Nigam
,
Sunshine, Margot
,
Tang, Rebecca
,
Whaley, Ryan
,
Letovksy, Stan
,
Buetow, Kenneth H
,
Rzhetsky, Andrey
,
Schachter, Vincent
,
Sobral, Bruno S
,
Dogrusoz, Ugur
,
McWeeney, Shannon
,
Aladjem, Mirit
,
Birney, Ewan
,
Collado-Vides, Julio
,
Goto, Susumu
,
Hucka, Michael
,
Le Novère, Nicolas
,
Maltsev, Natalia
,
Pandey, Akhilesh
,
Thomas, Paul
,
Wingender, Edgar
,
Karp, Peter D
,
Sander, Chris
,
Bader, Gary D
Published in
Nature biotechnology
Get full text
Article
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9
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Erratum: Corrigendum: The BioPAX community standard for pathway data sharing
by
Demir, Emek
,
Cary, Michael P
,
Paley, Suzanne
,
Fukuda, Ken
,
Lemer, Christian
,
Vastrik, Imre
,
Wu, Guanming
,
D'Eustachio, Peter
,
Schaefer, Carl
,
Luciano, Joanne
,
Schacherer, Frank
,
Martinez-Flores, Irma
,
Hu, Zhenjun
,
Jimenez-Jacinto, Veronica
,
Joshi-Tope, Geeta
,
Kandasamy, Kumaran
,
Lopez-Fuentes, Alejandra C
,
Mi, Huaiyu
,
Pichler, Elgar
,
Rodchenkov, Igor
,
Splendiani, Andrea
,
Tkachev, Sasha
,
Zucker, Jeremy
,
Gopinath, Gopal
,
Rajasimha, Harsha
,
Ramakrishnan, Ranjani
,
Shah, Imran
,
Syed, Mustafa
,
Anwar, Nadia
,
Babur, Özgün
,
Blinov, Michael
,
Brauner, Erik
,
Corwin, Dan
,
Donaldson, Sylva
,
Gibbons, Frank
,
Goldberg, Robert
,
Hornbeck, Peter
,
Luna, Augustin
,
Murray-Rust, Peter
,
Neumann, Eric
,
Reubenacker, Oliver
,
Samwald, Matthias
,
van Iersel, Martijn
,
Wimalaratne, Sarala
,
Allen, Keith
,
Braun, Burk
,
Whirl-Carrillo, Michelle
,
Cheung, Kei-Hoi
,
Dahlquist, Kam
,
Finney, Andrew
,
Gillespie, Marc
,
Glass, Elizabeth
,
Gong, Li
,
Haw, Robin
,
Honig, Michael
,
Hubaut, Olivier
,
Kane, David
,
Krupa, Shiva
,
Kutmon, Martina
,
Leonard, Julie
,
Marks, Debbie
,
Merberg, David
,
Petri, Victoria
,
Pico, Alex
,
Ravenscroft, Dean
,
Ren, Liya
,
Shah, Nigam
,
Sunshine, Margot
,
Tang, Rebecca
,
Whaley, Ryan
,
Letovksy, Stan
,
Buetow, Kenneth H
,
Rzhetsky, Andrey
,
Schachter, Vincent
,
Sobral, Bruno S
,
Dogrusoz, Ugur
,
McWeeney, Shannon
,
Aladjem, Mirit
,
Birney, Ewan
,
Collado-Vides, Julio
,
Goto, Susumu
,
Hucka, Michael
,
Novère, Nicolas Le
,
Maltsev, Natalia
,
Pandey, Akhilesh
,
Thomas, Paul
,
Wingender, Edgar
,
Karp, Peter D
,
Sander, Chris
,
Bader, Gary D
Published in
Nature biotechnology
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10
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Correction: Corrigendum: The BioPAX community standard for pathway data sharing
by
Demir, Emek
,
Cary, Michael P
,
Paley, Suzanne
,
Fukuda, Ken
,
Lemer, Christian
,
Vastrik, Imre
,
Wu, Guanming
,
D'Eustachio, Peter
,
Schaefer, Carl
,
Luciano, Joanne
,
Schacherer, Frank
,
Martinez-Flores, Irma
,
Hu, Zhenjun
,
Jimenez-Jacinto, Veronica
,
Joshi-Tope, Geeta
,
Kandasamy, Kumaran
,
Lopez-Fuentes, Alejandra C
,
Mi, Huaiyu
,
Pichler, Elgar
,
Rodchenkov, Igor
,
Splendiani, Andrea
,
Tkachev, Sasha
,
Zucker, Jeremy
,
Gopinath, Gopal
,
Rajasimha, Harsha
,
Ramakrishnan, Ranjani
,
Shah, Imran
,
Syed, Mustafa
,
Anwar, Nadia
,
Babur, Özgün
,
Blinov, Michael
,
Brauner, Erik
,
Corwin, Dan
,
Donaldson, Sylva
,
Gibbons, Frank
,
Goldberg, Robert
,
Hornbeck, Peter
,
Luna, Augustin
,
Murray-Rust, Peter
,
Neumann, Eric
,
Reubenacker, Oliver
,
Samwald, Matthias
,
van Iersel, Martijn
,
Wimalaratne, Sarala
,
Allen, Keith
,
Braun, Burk
,
Whirl-Carrillo, Michelle
,
Cheung, Kei-Hoi
,
Dahlquist, Kam
,
Finney, Andrew
,
Gillespie, Marc
,
Glass, Elizabeth
,
Gong, Li
,
Haw, Robin
,
Honig, Michael
,
Hubaut, Olivier
,
Kane, David
,
Krupa, Shiva
,
Kutmon, Martina
,
Leonard, Julie
,
Marks, Debbie
,
Merberg, David
,
Petri, Victoria
,
Pico, Alex
,
Ravenscroft, Dean
,
Ren, Liya
,
Shah, Nigam
,
Sunshine, Margot
,
Tang, Rebecca
,
Whaley, Ryan
,
Letovksy, Stan
,
Buetow, Kenneth H
,
Rzhetsky, Andrey
,
Schachter, Vincent
,
Sobral, Bruno S
,
Dogrusoz, Ugur
,
McWeeney, Shannon
,
Aladjem, Mirit
,
Birney, Ewan
,
Collado-Vides, Julio
,
Goto, Susumu
,
Hucka, Michael
,
Novère, Nicolas Le
,
Maltsev, Natalia
,
Pandey, Akhilesh
,
Thomas, Paul
,
Wingender, Edgar
,
Karp, Peter D
,
Sander, Chris
,
Bader, Gary D
Published in
Nature biotechnology
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Article
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