Complete Genome Sequence of Mycoplasma bovis Type Strain PG45 (ATCC 25523) by Wise, Kim S, Calcutt, Michael J, Foecking, Mark F, Röske, Kerstin, Madupu, Ramana, Methé, Barbara A

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A hydrogen-based subsurface microbial community dominated by methanogens by Chapelle, Francis H., O'Neill, Kathleen, Bradley, Paul M., Methé, Barbara A., Ciufo, Stacy A., Knobel, LeRoy L., Lovley, Derek R.

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Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons by Haas, Brian J, Gevers, Dirk, Earl, Ashlee M, Feldgarden, Mike, Ward, Doyle V, Giannoukos, Georgia, Ciulla, Dawn, Tabbaa, Diana, Highlander, Sarah K, Sodergren, Erica, Methé, Barbara, DeSantis, Todd Z, Petrosino, Joseph F, Knight, Rob, Birren, Bruce W

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Community differentiation of the cutaneous microbiota in psoriasis by Alekseyenko, Alexander V, Perez-Perez, Guillermo I, De Souza, Aieska, Strober, Bruce, Gao, Zhan, Bihan, Monika, Li, Kelvin, Methé, Barbara A, Blaser, Martin J

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Metagenomic identification of severe pneumonia pathogens in mechanically-ventilated patients: a feasibility and clinical validity study by Yang, Libing, Haidar, Ghady, Zia, Haris, Nettles, Rachel, Qin, Shulin, Wang, Xiaohong, Shah, Faraaz, Rapport, Sarah F, Charalampous, Themoula, Methé, Barbara, Fitch, Adam, Morris, Alison, McVerry, Bryan J, O'Grady, Justin, Kitsios, Georgios D

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Metabolic reconstruction for metagenomic data and its application to the human microbiome by Abubucker, Sahar, Segata, Nicola, Goll, Johannes, Schubert, Alyxandria M, Izard, Jacques, Cantarel, Brandi L, Rodriguez-Mueller, Beltran, Zucker, Jeremy, Thiagarajan, Mathangi, Henrissat, Bernard, White, Owen, Kelley, Scott T, Methé, Barbara, Schloss, Patrick D, Gevers, Dirk, Mitreva, Makedonka, Huttenhower, Curtis

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Meta-omics profiling of the gut-lung axis illuminates metabolic networks and host-microbial interactions associated with elevated lung elastance in a murine model of obese allergic... by Heinrich, Victoria A, Uvalle, Crystal, Manni, Michelle L, Li, Kelvin, Mullett, Steven J, Donepudi, Sri Ramya, Clader, Jason, Fitch, Adam, Ellgass, Madeline, Cechova, Veronika, Qin, Shulin, Holguin, Fernando, Freeman, Bruce A, Methé, Barbara A, Morris, Alison, Gelhaus, Stacy L

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DNA Microarray and Proteomic Analyses of the RpoS Regulon in Geobacter sulfurreducens by NUNEZ, Cinthia, ESTEVE-NUNEZ, Abraham, GIOMETTI, Carol, TOLLAKSEN, Sandra, KHARE, Tripti, LIN, Winston, LOVLEY, Derek R, METHE, Barbara A

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Genome-scale comparison and constraint-based metabolic reconstruction of the facultative anaerobic Fe(III)-reducer Rhodoferax ferrireducens by Risso, Carla, Sun, Jun, Zhuang, Kai, Mahadevan, Radhakrishnan, DeBoy, Robert, Ismail, Wael, Shrivastava, Susmita, Huot, Heather, Kothari, Sagar, Daugherty, Sean, Bui, Olivia, Schilling, Christophe H, Lovley, Derek R, Methé, Barbara A

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Alterations in Oral Microbiota in HIV Are Related to Decreased Pulmonary Function by Yang, Libing, Dunlap, Daniel G, Qin, Shulin, Fitch, Adam, Li, Kelvin, Koch, Carl D, Nouraie, Mehdi, DeSensi, Rebecca, Ho, Ken S, Martinson, Jeremy J, Methé, Barbara, Morris, Alison

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Invasive non-typhoidal Salmonella in sickle cell disease in Africa: is increased gut permeability the missing link? by Lim, Seah H, Methé, Barbara A, Knoll, Bettina M, Morris, Alison, Obaro, Stephen K

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METAREP: JCVI metagenomics reports—an open source tool for high-performance comparative metagenomics by Goll, Johannes, Rusch, Douglas B., Tanenbaum, David M., Thiagarajan, Mathangi, Li, Kelvin, Methé, Barbara A., Yooseph, Shibu

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"Longitudinal Fecal Microbiome Study of Total Body Irradiated Mice Treated With Radiation Mitigators Identifies Bacterial Associations With Survival" by Li, Kelvin, Epperly, Michael W, Barreto, Gabriella Acosta, Greenberger, Joel S, Methé, Barbara A

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Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure by Coyne, Robert S, Thiagarajan, Mathangi, Jones, Kristie M, Wortman, Jennifer R, Tallon, Luke J, Haas, Brian J, Cassidy-Hanley, Donna M, Wiley, Emily A, Smith, Joshua J, Collins, Kathleen, Lee, Suzanne R, Couvillion, Mary T, Liu, Yifan, Garg, Jyoti, Pearlman, Ronald E, Hamilton, Eileen P, Orias, Eduardo, Eisen, Jonathan A, Methé, Barbara A

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Impact of Dietary Tungsten and Topical Nitrite in Diabetic Wound Healing and the Composition of the Wound Microbiome by Gonzalez, Kathy, Salem, Karim M., Methé, Barbara, Li, Kelvin, Hong, Guiying, Tzeng, Edith

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Complete Genome Sequences of Mycoplasma leachii Strain PG50T and the Pathogenic Mycoplasma mycoides subsp. mycoides Small Colony Biotype Strain Gladysdale by Wise, Kim S, Calcutt, Michael J, Foecking, Mark F, Madupu, Ramana, DeBoy, Robert T, Röske, Kerstin, Hvinden, Miranda L, Martin, Tara R, Durkin, A. Scott, Glass, John I, Methé, Barbara A

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Involvement of Geobacter sulfurreducens SfrAB in acetate metabolism rather than intracellular, respiration-linked Fe(III) citrate reduction by Coppi, Maddalena V, O'Neil, Regina A, Leang, Ching, Kaufmann, Franz, Methe, Barbara A, Nevin, Kelly P, Woodard, Trevor L, Liu, Anna, Lovley, Derek R

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The microbiome of pediatric patients with chronic rhinosinusitis by Stapleton, Amanda L., Shaffer, Amber D., Morris, Alison, Li, Kelvin, Fitch, Adam, Methé, Barbara A.

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Respiratory Tract Dysbiosis Is Associated with Worse Outcomes in Mechanically Ventilated Patients by Kitsios, Georgios D, Yang, Haopu, Yang, Libing, Qin, Shulin, Fitch, Adam, Wang, Xiao-Hong, Fair, Katherine, Evankovich, John, Bain, William, Shah, Faraaz, Li, Kelvin, Methé, Barbara, Benos, Panayiotis V, Morris, Alison, McVerry, Bryan J

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Intractable Coronavirus Disease 2019 (COVID-19) and Prolonged Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Replication in a Chimeric Antigen Receptor-Modified T-Cel... by Hensley, Matthew K, Bain, William G, Jacobs, Jana, Nambulli, Sham, Parikh, Urvi, Cillo, Anthony, Staines, Brittany, Heaps, Amy, Sobolewski, Michele D, Rennick, Linda J, Macatangay, Bernard J C, Klamar-Blain, Cynthia, Kitsios, Georgios D, Methé, Barbara, Somasundaram, Ashwin, Bruno, Tullia C, Cardello, Carly, Shan, Feng, Workman, Creg, Ray, Prabir, Ray, Anuradha, Lee, Janet, Sethi, Rahil, Schwarzmann, William E, Ladinsky, Mark S, Bjorkman, Pamela J, Vignali, Dario A, Duprex, W Paul, Agha, Mounzer E, Mellors, John W, McCormick, Kevin D, Morris, Alison, Haidar, Ghady

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