Mapping global dynamics of benchmark creation and saturation in artificial intelligence by Ott, Simon, Barbosa-Silva, Adriano, Blagec, Kathrin, Brauner, Jan, Samwald, Matthias

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PESCADOR, a web-based tool to assist text-mining of biointeractions extracted from PubMed queries by Barbosa-Silva, Adriano, Fontaine, Jean-Fred, Donnard, Elisa R, Stussi, Fernanda, Ortega, J Miguel, Andrade-Navarro, Miguel A

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A curated, ontology-based, large-scale knowledge graph of artificial intelligence tasks and benchmarks by Blagec, Kathrin, Barbosa-Silva, Adriano, Ott, Simon, Samwald, Matthias

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A reference guide for tree analysis and visualization by Pavlopoulos, Georgios A, Soldatos, Theodoros G, Barbosa-Silva, Adriano, Schneider, Reinhard

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LAITOR4HPC: A text mining pipeline based on HPC for building interaction networks by Piereck, Bruna, Oliveira-Lima, Marx, Benko-Iseppon, Ana Maria, Diehl, Sarah, Schneider, Reinhard, Brasileiro-Vidal, Ana Christina, Barbosa-Silva, Adriano

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Data and knowledge management in translational research: implementation of the eTRIKS platform for the IMI OncoTrack consortium by Gu, Wei, Yildirimman, Reha, Van der Stuyft, Emmanuel, Verbeeck, Denny, Herzinger, Sascha, Satagopam, Venkata, Barbosa-Silva, Adriano, Schneider, Reinhard, Lange, Bodo, Lehrach, Hans, Guo, Yike, Henderson, David, Rowe, Anthony

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LAITOR--Literature Assistant for Identification of Terms co-Occurrences and Relationships by Barbosa-Silva, Adriano, Soldatos, Theodoros G, Magalhães, Ivan L F, Pavlopoulos, Georgios A, Fontaine, Jean-Fred, Andrade-Navarro, Miguel A, Schneider, Reinhard, Ortega, J Miguel

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LinkExplorer: predicting, explaining and exploring links in large biomedical knowledge graphs by Ott, Simon, Barbosa-Silva, Adriano, Samwald, Matthias

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Clustering of cognate proteins among distinct proteomes derived from multiple links to a single seed sequence by Barbosa-Silva, Adriano, Satagopam, Venkata P, Schneider, Reinhard, Ortega, J Miguel

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A Data Science Approach for the Identification of Molecular Signatures of Aggressive Cancers by Barbosa-Silva, Adriano, Magalhães, Milena, Da Silva, Gilberto Ferreira, Da Silva, Fabricio Alves Barbosa, Carneiro, Flávia Raquel Gonçalves, Carels, Nicolas

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Caipirini: using gene sets to rank literature by Soldatos, Theodoros G, O'Donoghue, Seán I, Satagopam, Venkata P, Barbosa-Silva, Adriano, Pavlopoulos, Georgios A, Wanderley-Nogueira, Ana Carolina, Soares-Cavalcanti, Nina Mota, Schneider, Reinhard

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uORFdb--a comprehensive literature database on eukaryotic uORF biology by Wethmar, Klaus, Barbosa-Silva, Adriano, Andrade-Navarro, Miguel A, Leutz, Achim

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SmartR: an open-source platform for interactive visual analytics for translational research data by Herzinger, Sascha, Gu, Wei, Satagopam, Venkata, Eifes, Serge, Rege, Kavita, Barbosa-Silva, Adriano, Schneider, Reinhard

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RA-MAP, molecular immunological landscapes in early rheumatoid arthritis and healthy vaccine recipients by Isaacs, John D., Brockbank, Sarah, Pedersen, Ayako Wakatsuki, Hilkens, Catharien, Anderson, Amy, Stocks, Philip, Lendrem, Dennis, Tarn, Jessica, Smith, Graham R., Allen, Ben, Casement, John, Diboll, Julie, Harry, Rachel, Cooles, Faye A. H., Cope, Andrew P., Simpson, Gemma, Toward, Ruth, Noble, Hayley, Parke, Angela, Wu, Wing, Clarke, Fiona, Scott, David, Scott, Ian C., Galloway, James, Lempp, Heidi, Ibrahim, Fowzia, Schwank, Samana, Molyneux, Gemma, Lazarov, Tomi, Geissmann, Frederic, Goodyear, Carl S., McInnes, Iain B., Donnelly, Iona, Gilmour, Ashley, Virlan, Aysin Tulunay, Porter, Duncan, Ponchel, Frederique, Emery, Paul, El-Jawhari, Jehan, Parmar, Rekha, McDermott, Michael F., Fisher, Benjamin A., Young, Steve P., Jones, Philip, Raza, Karim, Filer, Andrew, Pitzalis, Costantino, Barnes, Michael R., Watson, David S., Henkin, Rafael, Thorborn, Georgina, Fossati-Jimack, Liliane, Kelly, Stephen, Humby, Frances, Bombardieri, Michele, Rana, Sharmila, Jia, Zhilong, Goldmann, Katriona, Lewis, Myles, Ng, Sandra, Barbosa-Silva, Adriano, Tzanis, Evan, Gallagher-Syed, Amaya, John, Christopher R., Ehrenstein, Michael R., Altobelli, Gioia, Martins, Sandra, Nguyen, Dao, Ali, Humayara, Ciurtin, Coziana, Buch, Maya, Symmons, Deborah, Worthington, Jane, Bruce, Ian N., Sergeant, Jamie C., Verstappen, Suzanne M. M., Stirling, Fiona, Hughes-Morley, Adwoa, Tom, Brian, Farewell, Vernon, Zhong, Yujie, Taylor, Peter C., Buckley, Christopher D., Keidel, Sarah, Cuff, Carolyn, Levesque, Marc, Long, Andrew, Liu, Zheng, Lipsky, Samantha, Harvey, Bohdan, Macoritto, Michael, Hong, Feng, Kaymakcalan, Sukru, Tsuji, Wayne, Sabin, Tony, Ward, Neil, Talbot, Susan, Padhji, Desmond, Sleeman, Matthew, Finch, Donna

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Génie: literature-based gene prioritization at multi genomic scale by Fontaine, Jean-Fred, Priller, Florian, Barbosa-Silva, Adriano, Andrade-Navarro, Miguel A.

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Nonfunctional parathyroid cyst: case report by Nardi, Carlos Eduardo Molinari, Silva, Ricardo Adriano Nasser Barbosa da, Serafim, Cynthia Maria Massarico, Dedivitis, Rogério Aparecido

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Presenting and sharing clinical data using the eTRIKS Standards Master Tree for tranSMART by Barbosa-Silva, Adriano, Bratfalean, Dorina, Gu, Wei, Satagopam, Venkata, Houston, Paul, Becnel, Lauren B, Eifes, Serge, Richard, Fabien, Tielmann, Andreas, Herzinger, Sascha, Rege, Kavita, Balling, Rudi, Peeters, Paul, Schneider, Reinhard

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Modulation of defence and iron homeostasis genes in rice roots by the diazotrophic endophyte Herbaspirillum seropedicae by Brusamarello-Santos, Liziane Cristina Campos, Alberton, Dayane, Valdameri, Glaucio, Camilios-Neto, Doumit, Covre, Rafael, Lopes, Katia de Paiva, Zibetti Tadra-Sfeir, Michelle, Faoro, Helisson, Adele Monteiro, Rose, Barbosa-Silva, Adriano, John Broughton, William, Oliveira Pedrosa, Fabio, Wassem, Roseli, Souza, Emanuel Maltempi de

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Classification of non-Hodgkin lymphomas based on sample entropy signatures by Rozendo, Guilherme Botazzo, do Nascimento, Marcelo Zanchetta, Roberto, Guilherme Freire, de Faria, Paulo Rogério, Silva, Adriano Barbosa, Tosta, Thaína Aparecida Azevedo, Neves, Leandro Alves

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Computational analysis of histological images from hematoxylin and eosin-stained oral epithelial dysplasia tissue sections by Silva, Adriano Barbosa, Martins, Alessandro Santana, Tosta, Thaína Aparecida Azevedo, Neves, Leandro Alves, Servato, João Paulo Silva, de Araújo, Marcelo Sivieri, de Faria, Paulo Rogério, do Nascimento, Marcelo Zanchetta

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