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Statistical mechanical properties of sequence space determine the efficiency of the various algorithms to predict interaction energies and native contacts from protein coevolution
by
Franco, G
,
Cagiada, M
,
Bussi, G
,
Tiana, G
Published in
Physical biology
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Statistical mechanical properties of sequence space determine the efficiency of the various algorithms to predict interaction energies and native contacts from protein coevolution
by
Franco, G
,
Cagiada, M
,
Bussi, G
,
Tiana, G
Published in
arXiv.org
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Prediction of native contacts in proteins from an out--of--equilibrium coevolutionary process
by
Oriani, D
,
Cagiada, M
,
Tiana, G
Published in
arXiv.org
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Rapid protein stability prediction using deep learning representations
by
Blaabjerg, Lasse M
,
Kassem, Maher M
,
Good, Lydia L
,
Jonsson, Nicolas
,
Cagiada, Matteo
,
Johansson, Kristoffer E
,
Boomsma, Wouter
,
Stein, Amelie
,
Lindorff-Larsen, Kresten
Published in
eLife
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Discovering functionally important sites in proteins
by
Cagiada, Matteo
,
Bottaro, Sandro
,
Lindemose, Søren
,
Schenstrøm, Signe M.
,
Stein, Amelie
,
Hartmann-Petersen, Rasmus
,
Lindorff-Larsen, Kresten
Published in
Nature communications
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Deep mutational scanning reveals a correlation between degradation and toxicity of thousands of aspartoacylase variants
by
Grønbæk-Thygesen, Martin
,
Voutsinos, Vasileios
,
Johansson, Kristoffer E.
,
Schulze, Thea K.
,
Cagiada, Matteo
,
Pedersen, Line
,
Clausen, Lene
,
Nariya, Snehal
,
Powell, Rachel L.
,
Stein, Amelie
,
Fowler, Douglas M.
,
Lindorff-Larsen, Kresten
,
Hartmann-Petersen, Rasmus
Published in
Nature communications
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A mutational atlas for Parkin proteostasis
by
Clausen, Lene
,
Voutsinos, Vasileios
,
Cagiada, Matteo
,
Johansson, Kristoffer E.
,
Grønbæk-Thygesen, Martin
,
Nariya, Snehal
,
Powell, Rachel L.
,
Have, Magnus K. N.
,
Oestergaard, Vibe H.
,
Stein, Amelie
,
Fowler, Douglas M.
,
Lindorff-Larsen, Kresten
,
Hartmann-Petersen, Rasmus
Published in
Nature communications
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Understanding the Origins of Loss of Protein Function by Analyzing the Effects of Thousands of Variants on Activity and Abundance
by
Cagiada, Matteo
,
Johansson, Kristoffer E
,
Valanciute, Audrone
,
Nielsen, Sofie V
,
Hartmann-Petersen, Rasmus
,
Yang, Jun J
,
Fowler, Douglas M
,
Stein, Amelie
,
Lindorff-Larsen, Kresten
Published in
Molecular biology and evolution
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