Search Results - Calviello, Aslihan Karabacak

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  1. 1
    Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling

    Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling by Karabacak Calviello, Aslıhan, Hirsekorn, Antje, Wurmus, Ricardo, Yusuf, Dilmurat, Ohler, Uwe

    Published in Genome Biology
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  2. 2
    Lineage-Resolved Enhancer and Promoter Usage during a Time Course of Embryogenesis

    Lineage-Resolved Enhancer and Promoter Usage during a Time Course of Embryogenesis by Reddington, James P., Garfield, David A., Sigalova, Olga M., Karabacak Calviello, Aslihan, Marco-Ferreres, Raquel, Girardot, Charles, Viales, Rebecca R., Degner, Jacob F., Ohler, Uwe, Furlong, Eileen E.M.

    Published in Developmental cell
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  3. 3
    Tumor-intrinsic expression of the autophagy gene Atg16l1 suppresses anti-tumor immunity in colorectal cancer

    Tumor-intrinsic expression of the autophagy gene Atg16l1 suppresses anti-tumor immunity in colorectal cancer by Taraborrelli, Lucia, Şenbabaoğlu, Yasin, Wang, Lifen, Lim, Junghyun, Blake, Kerrigan, Kljavin, Noelyn, Gierke, Sarah, Scherl, Alexis, Ziai, James, McNamara, Erin, Owyong, Mark, Rao, Shilpa, Calviello, Aslihan Karabacak, Oreper, Daniel, Jhunjhunwala, Suchit, Argiles, Guillem, Bendell, Johanna, Kim, Tae Won, Ciardiello, Fortunato, Wongchenko, Matthew J., de Sauvage, Frederic J., de Sousa e Melo, Felipe, Yan, Yibing, West, Nathaniel R., Murthy, Aditya

    Published in Nature communications
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  4. 4
    Cross-tissue organization of the fibroblast lineage

    Cross-tissue organization of the fibroblast lineage by Buechler, Matthew B., Pradhan, Rachana N., Krishnamurty, Akshay T., Cox, Christian, Calviello, Aslihan Karabacak, Wang, Amber W., Yang, Yeqing Angela, Tam, Lucinda, Caothien, Roger, Roose-Girma, Merone, Modrusan, Zora, Arron, Joseph R., Bourgon, Richard, Müller, Sören, Turley, Shannon. J.

    Published in Nature (London)
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