The Cancer Genome Atlas: Creating Lasting Value beyond Its Data by Hutter, Carolyn, Zenklusen, Jean Claude

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Rembrandt: helping personalized medicine become a reality through integrative translational research by Madhavan, Subha, Zenklusen, Jean-Claude, Kotliarov, Yuri, Sahni, Himanso, Fine, Howard A, Buetow, Kenneth

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The next horizon in precision oncology: Proteogenomics to inform cancer diagnosis and treatment by Rodriguez, Henry, Zenklusen, Jean Claude, Staudt, Louis M., Doroshow, James H., Lowy, Douglas R.

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The REMBRANDT study, a large collection of genomic data from brain cancer patients by Gusev, Yuriy, Bhuvaneshwar, Krithika, Song, Lei, Zenklusen, Jean-Claude, Fine, Howard, Madhavan, Subha

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Resource requirements to accelerate clinical applications of next generation sequencing and radiomics: Workshop commentary and review by Harris, Lyndsay, Shankar, Lalitha K, Hildebrandt, Claire, Rubinstein, Wendy S, Langlais, Kristofor, Rodriguez, Henry, Berger, Adam, Freymann, John, Huang, Erich P, Williams, P Mickey, Claude Zenklusen, Jean, Ochs, Robert, Tezak, Zivana, Sahiner, Berkman

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The International Collaboration for Cancer Classification and Research by Cree, Ian A., Indave Ruiz, Blanca Iciar, Zavadil, Jiri, McKay, James, Olivier, Magali, Kozlakidis, Zisis, Lazar, Alexander J., Hyde, Chris, Holdenrieder, Stefan, Hastings, Ros, Rajpoot, Nasir, Fouchardiere, Arnaud, Rous, Brian, Zenklusen, Jean Claude, Normanno, Nicola, Schilsky, Richard L.

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Just Add Data: automated predictive modeling for knowledge discovery and feature selection by Tsamardinos, Ioannis, Charonyktakis, Paulos, Papoutsoglou, Georgios, Borboudakis, Giorgos, Lakiotaki, Kleanthi, Zenklusen, Jean Claude, Juhl, Hartmut, Chatzaki, Ekaterini, Lagani, Vincenzo

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Epigenetic-Mediated Dysfunction of the Bone Morphogenetic Protein Pathway Inhibits Differentiation of Glioblastoma-Initiating Cells by Lee, Jeongwu, Son, Myung Jin, Woolard, Kevin, Donin, Nicholas M., Li, Aiguo, Cheng, Chui H., Kotliarova, Svetlana, Kotliarov, Yuri, Walling, Jennifer, Ahn, Susie, Kim, Misuk, Totonchy, Mariam, Cusack, Thomas, Ene, Chibawanye, Ma, Hilary, Su, Qin, Zenklusen, Jean Claude, Zhang, Wei, Maric, Dragan, Fine, Howard A.

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Prediction of Associations between microRNAs and Gene Expression in Glioma Biology by Wuchty, Stefan, Arjona, Dolores, Li, Aiguo, Kotliarov, Yuri, Walling, Jennifer, Ahn, Susie, Zhang, Alice, Maric, Dragan, Anolik, Rachel, Zenklusen, Jean Claude, Fine, Howard A

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CNAReporter: a GenePattern pipeline for the generation of clinical reports of genomic alterations by Kotliarov, Yuri, Bozdag, Serdar, Cheng, Hangjiong, Wuchty, Stefan, Zenklusen, Jean-Claude, Fine, Howard A

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Localization and characterization of ST7 in cancer by Charong, Nurdina, Patmasiriwat, Pimpicha, Zenklusen, Jean Claude

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Gene pathways and subnetworks distinguish between major glioma subtypes and elucidate potential underlying biology by Wuchty, Stefan, Zhang, Alice, Walling, Jennifer, Ahn, Susie, Li, Aiguo, Quezado, Martha, Oberholtzer, Carl, Zenklusen, Jean-Claude, Fine, Howard A.

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Integrated genomic characterization of oesophageal carcinoma by Reis, R. M., The Cancer Genome Atlas Research Network

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The Integrated Genomic Landscape of Thymic Epithelial Tumors by Anur, Pavana, McLellan, Mike, Bowlby, Reanne, Hegde, Apurva M., Leiserson, Mark D.M., Sethi, Geetika, Ryan, Michael, Su, Xiaoping, Cherniack, Andrew D., Akbani, Rehan, Spellman, Paul, Weinstein, John N., Raphael, Ben, Zenklusen, Jean Claude, Ally, Adrian, Appelbaum, Elizabeth L., Balasundaram, Miruna, Behera, Madhusmita, Blandino, Giovanni, Bowen, Jay, Carlsen, Rebecca, Carvalho, Andre L., Chin, Lynda, Choe, Gina, Chudamani, Sudha, Cibulskis, Carrie, Cordes, Matthew G., Crain, Daniel, Curley, Erin, Defreitas, Timothy, Dienemann, Hendrik, Facciolo, Francesco, Ferguson, Martin L., Fulton, Robert S., Gabriel, Stacey B., Gardner, Johanna, Gehlenborg, Nils, Gerken, Mark, Getz, Gad, Heiman, David I., Holbrook, Andrea, Hoyle, Alan P., Jones, Corbin D., Jones, Steven J.M., Kasaian, Katayoon, Lai, Phillip H., Lawrence, Michael S., Lin, Pei, Lolla, Laxmi, Lu, Yiling, Ma, Yussanne, Mardis, Elaine R., Meister, Michael, Meng, Shaowu, Meyerson, Matthew, Mills, Gordon B., Moore, Richard A., Morris, Scott, Mose, Lisle E., Muley, Thomas, Naresh, Rashi, Newton, Yulia, Owonikoko, Taofeek, Paulaskis, Joseph, Perou, Charles M., Perrin, Corinne, Radenbaugh, Amie, Ramirez, Nilsa, Rieker, Ralf, Roach, Jeffrey, Sadeghi, Sara, Saksena, Gordon, Schein, Jacqueline E., Schumacher, Steven E., Shelton, Candace, Shi, Yan, Simons, Janae V., Sofia, Heidi J., Sun, Qiang, Tan, Donghui, Tarnuzzer, Roy, Van Den Berg, David J., Veluvolu, Umadevi, Walter, Vonn, Wang, Zhining, Warth, Arne, Weis, Cleo-Aron, Weisenberger, Daniel J., Wilkerson, Matthew D., Wu, Hsin-Ta, Wu, Ye, Zmuda, Erik, Hwang, David, Marino, Mirella, Gokmen-Polar, Yesim, Badve, Sunil, Rajan, Arun, Ströbel, Philipp, Tsao, Ming S., Loehrer, Patrick J.

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Glycogen Synthase Kinase-3 Inhibition Induces Glioma Cell Death through c-MYC, Nuclear Factor-κB, and Glucose Regulation by Kotliarova, Svetlana, Pastorino, Sandra, Kovell, Lara C., Kotliarov, Yuri, Song, Hua, Zhang, Wei, Bailey, Rolanda, Maric, Dragan, Zenklusen, Jean Claude, Lee, Jeongwu, Fine, Howard A.

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Genomic changes and gene expression profiles reveal that established glioma cell lines are poorly representative of primary human gliomas by Li, Aiguo, Walling, Jennifer, Kotliarov, Yuri, Center, Angela, Steed, Mary Ellen, Ahn, Susie J, Rosenblum, Mark, Mikkelsen, Tom, Zenklusen, Jean Claude, Fine, Howard A

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The Exceptional Responders Initiative: Feasibility of a National Cancer Institute Pilot Study by Conley, Barbara A, Staudt, Lou, Takebe, Naoko, Wheeler, David A, Wang, Linghua, Cardenas, Maria F, Korchina, Viktoriya, Zenklusen, Jean Claude, McShane, Lisa M, Tricoli, James V, Williams, Paul M, Lubensky, Irina, O’Sullivan-Coyne, Geraldine, Kohn, Elise, Little, Richard F, White, Jeffrey, Malik, Shakun, Harris, Lyndsay N, Mann, Bhupinder, Weil, Carol, Tarnuzzer, Roy, Karlovich, Chris, Rodgers, Brian, Shankar, Lalitha, Jacobs, Paula M, Nolan, Tracy, Berryman, Sean M, Gastier-Foster, Julie, Bowen, Jay, Leraas, Kristen, Shen, Hui, Laird, Peter W, Esteller, Manel, Miller, Vincent, Johnson, Adrienne, Edmondson, Elijah F, Giordano, Thomas J, Kim, Benjamin, Ivy, S Percy

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Abstract 4681: Human Cancer Models Initiative (HCMI): A community resource of next-generation cancer models and associated data by Tonsing-Carter, Eva, Agarwal, Rachana, Kyi, Cindy W., Perez-Mayoral, Julyann, Soria, Conrado T., Zenklusen, Jean Claude

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Core Clinical Data Elements for Cancer Genomic Repositories: A Multi-stakeholder Consensus by Conley, Robert B., Dickson, Dane, Zenklusen, Jean Claude, Al Naber, Jennifer, Messner, Donna A., Atasoy, Ajlan, Chaihorsky, Lena, Collyar, Deborah, Compton, Carolyn, Ferguson, Martin, Khozin, Sean, Klein, Roger D., Kotte, Sri, Kurzrock, Razelle, Lin, C. Jimmy, Liu, Frank, Marino, Ingrid, McDonough, Robert, McNeal, Amy, Miller, Vincent, Schilsky, Richard L., Wang, Lisa I.

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Abstract 2969: Localization and characterization of ST7 in cancer by Charong, Nurdina, Patmasiriwat, Pimpicha, Zenklusen, Jean Claude

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