Asynchronicity of endemic and emerging mosquito-borne disease outbreaks in the Dominican Republic by Petrone, Mary E., Earnest, Rebecca, Lourenço, José, Kraemer, Moritz U. G., Paulino-Ramirez, Robert, Grubaugh, Nathan D., Tapia, Leandro

Get full text

Detection of SARS-CoV-2 RNA by multiplex RT-qPCR by Kudo, Eriko, Israelow, Benjamin, Vogels, Chantal B F, Lu, Peiwen, Wyllie, Anne L, Tokuyama, Maria, Venkataraman, Arvind, Brackney, Doug E, Ott, Isabel M, Petrone, Mary E, Earnest, Rebecca, Lapidus, Sarah, Muenker, M Catherine, Moore, Adam J, Casanovas-Massana, Arnau, Omer, Saad B, Dela Cruz, Charles S, Farhadian, Shelli F, Ko, Albert I, Grubaugh, Nathan D, Iwasaki, Akiko

Get full text

Multiple Transmission Chains within COVID-19 Cluster, Connecticut, USA, 2020 by Bart, Stephen M, Flaherty, Eileen, Alpert, Tara, Carlson, Sherry, Fasulo, Lisa, Earnest, Rebecca, White, Elizabeth B, Dickens, Noel, Brito, Anderson F, Grubaugh, Nathan D, Hadler, James L, Sosa, Lynn E

Get full text

Daily Rapid Antigen Exit Testing to Tailor University COVID-19 Isolation Policy by Earnest, Rebecca, Chen, Christine, Chaguza, Chrispin, Hahn, Anne M, Grubaugh, Nathan D, Wilson, Madeline S

Get full text

Impact of circulating SARS-CoV-2 variants on mRNA vaccine-induced immunity by Lucas, Carolina, Vogels, Chantal B. F., Yildirim, Inci, Rothman, Jessica E., Lu, Peiwen, Monteiro, Valter, Gehlhausen, Jeff R., Campbell, Melissa, Silva, Julio, Tabachnikova, Alexandra, Peña-Hernandez, Mario A., Muenker, M. Catherine, Breban, Mallery I., Fauver, Joseph R., Mohanty, Subhasis, Huang, Jiefang, Shaw, Albert C., Ko, Albert I., Omer, Saad B., Grubaugh, Nathan D., Iwasaki, Akiko

Get full text

A stem-loop RNA RIG-I agonist protects against acute and chronic SARS-CoV-2 infection in mice by Mao, Tianyang, Israelow, Benjamin, Lucas, Carolina, Vogels, Chantal B F, Gomez-Calvo, Maria Luisa, Fedorova, Olga, Breban, Mallery I, Menasche, Bridget L, Dong, Huiping, Linehan, Melissa, Wilen, Craig B, Landry, Marie L, Grubaugh, Nathan D, Pyle, Anna M, Iwasaki, Akiko

Get full text

Lineage abundance estimation for SARS-CoV-2 in wastewater using transcriptome quantification techniques by Baaijens, Jasmijn A, Zulli, Alessandro, Ott, Isabel M, Nika, Ioanna, van der Lugt, Mart J, Petrone, Mary E, Alpert, Tara, Fauver, Joseph R, Kalinich, Chaney C, Vogels, Chantal B F, Breban, Mallery I, Duvallet, Claire, McElroy, Kyle A, Ghaeli, Newsha, Imakaev, Maxim, Mckenzie-Bennett, Malaika F, Robison, Keith, Plocik, Alex, Schilling, Rebecca, Pierson, Martha, Littlefield, Rebecca, Spencer, Michelle L, Simen, Birgitte B, Hanage, William P, Grubaugh, Nathan D, Peccia, Jordan, Baym, Michael

Get full text

SalivaDirect: A Simplified and Flexible Platform to Enhance SARS-CoV-2 Testing Capacity by Chantal B.F. Vogels, Watkins, Anne E, Harden, Christina A, Brackney, Doug E, Shafer, Jared, Wang, Jianhui, Caraballo, César, Kalinich, Chaney C, Ott, Isabel M, Fauver, Joseph R, Kudo, Eriko, Lu, Peiwen, Venkataraman, Arvind, Tokuyama, Maria, Moore, Adam J, Muenker, M Catherine, Casanovas-Massana, Arnau, Fournier, John, Santos Bermejo, Campbell, Melissa, Datta, Rupak, Nelson, Allison, Anastasio, Kelly, Askenase, Michael H, Batsu, Maria, Bickerton, Sean, Brower, Kristina, Bucklin, Molly L, Cahill, Staci, Cao, Yiyun, Courchaine, Edward, DeIuliis, Giuseppe, Earnest, Rebecca, Geng, Bertie, Goldman-Israelow, Benjamin, Handoko, Ryan, Khoury-Hanold, William, Kim, Daniel, Knaggs, Lynda, Kuang, Maxine, Lapidus, Sarah, Lim, Joseph, Linehan, Melissa, Lu-Culligan, Alice, Martin, Anjelica, Matos, Irene, McDonald, David, Minasyan, Maksym, Nakahata, Maura, Nida Naushad, Nouws, Jessica, Obaid, Abeer, Odio, Camila, Oh, Ji Eun, Saad Omer, Park, Annsea, Hong-Jai Park, Peng, Xiaohua, Petrone, Mary, Prophet, Sarah, Rice, Tyler, Kadi-Ann Rose, Sewanan, Lorenzo, Sharma, Lokesh, Shaw, Albert C, Shepard, Denise, Smolgovsky, Mikhail, Sonnert, Nicole, Strong, Yvette, Todeasa, Codruta, Valdez, Jordan, Velazquez, Sofia, Vijayakumar, Pavithra, White, Elizabeth B, Yang, Yexin, Dela Cruz, Charles S, Ko, Albert I, Iwasaki, Akiko, Krumholz, Harlan M, Matheus, J D, Pei, Hui, Liu, Chen, Farhadian, Shelli F, Sikka, Robby, Wyllie, Anne L, Grubaugh, Nathan D

Request full text

Multiscale PHATE identifies multimodal signatures of COVID-19 by Kuchroo, Manik, Huang, Jessie, Wong, Patrick, Grenier, Jean-Christophe, Shung, Dennis, Tong, Alexander, Lucas, Carolina, Klein, Jon, Burkhardt, Daniel B., Gigante, Scott, Godavarthi, Abhinav, Rieck, Bastian, Israelow, Benjamin, Simonov, Michael, Mao, Tianyang, Oh, Ji Eun, Silva, Julio, Takahashi, Takehiro, Odio, Camila D., Casanovas-Massana, Arnau, Fournier, John, Farhadian, Shelli, Dela Cruz, Charles S., Ko, Albert I., Hirn, Matthew J., Wilson, F. Perry, Hussin, Julie G., Wolf, Guy, Iwasaki, Akiko, Krishnaswamy, Smita

Get full text

Method versatility in RNA extraction-free PCR detection of SARS-CoV-2 in saliva samples by Allicock, Orchid M., Yolda-Carr, Devyn, Earnest, Rebecca, Breban, Mallery I., Vega, Noel, Ott, Isabel M., Kalinich, Chaney, Alpert, Tara, Petrone, Mary E, Wyllie, Anne L.

Get full text

Accelerated SARS-CoV-2 intrahost evolution leading to distinct genotypes during chronic infection by Chaguza, Chrispin, Hahn, Anne M., Petrone, Mary E., Zhou, Shuntai, Ferguson, David, Breban, Mallery I., Pham, Kien, Peña-Hernández, Mario A., Castaldi, Christopher, Hill, Verity, Billig, Kendall, Earnest, Rebecca, Fauver, Joseph R., Kalinch, Chaney C., Kerantzas, Nicholas, Koch, Tobias R., De Kumar, Bony, Landry, Marie L., Ott, Isabel M., Peaper, David, Tikhonova, Irina R., Vogels, Chantal B.F., Schulz, Wade, Swanstrom, Ronald I., Roberts, Scott C., Grubaugh, Nathan D.

Get full text

SARS-CoV-2 Outbreak at a College with High COVID-19 Vaccination Coverage—Connecticut, August–September 2021 by Bart, Stephen M., Curtiss, Christina C., Earnest, Rebecca, Lobe-Costonis, Rachel, Peterson, Hanna, McWilliams, Caroline, Billig, Kendall, Hadler, James L., Grubaugh, Nathan D., Arcelus, Victor J., Sosa, Lynn E.

Get full text

Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Outbreak at a College With High Coronavirus Disease 2019 (COVID-19) Vaccination Coverage—Connecticut, August 2021–Septe... by Bart, Stephen M, Curtiss, Christina C, Earnest, Rebecca, Lobe-Costonis, Rachel, Peterson, Hanna, McWilliams, Caroline, Billig, Kendall, Hadler, James L, Grubaugh, Nathan D, Arcelus, Victor J, Sosa, Lynn E

Get full text

Multiple Transmission Chains within COVID-19 Cluster, Connecticut, USA, 20201 by Bart, Stephen M., Flaherty, Eileen, Alpert, Tara, Carlson, Sherry, Fasulo, Lisa, Earnest, Rebecca, White, Elizabeth B., Dickens, Noel, Brito, Anderson F., Grubaugh, Nathan D., Hadler, James L., Sosa, Lynn E.

Get full text

Rapid emergence of SARS-CoV-2 Omicron variant is associated with an infection advantage over Delta in vaccinated persons by Chaguza, Chrispin, Coppi, Andreas, Earnest, Rebecca, Ferguson, David, Kerantzas, Nicholas, Warner, Frederick, Young, H Patrick, Breban, Mallery I, Billig, Kendall, Robert Tobias Koch, Pham, Kien, Kalinich, Chaney C, Ott, Isabel M, Fauver, Joseph R, Hahn, Anne M, Tikhonova, Irina R, Castaldi, Christopher, Bony De Kumar, Pettker, Christian M, Warren, Joshua L, Weinberger, Daniel M, Landry, Marie L, Peaper, David R, Schulz, Wade, Chantal B.F. Vogels, Grubaugh, Nathan D

Request full text

Reply to: A finding of sex similarities rather than differences in COVID-19 outcomes by Takahashi, Takehiro, Ellingson, Mallory K., Wong, Patrick, Israelow, Benjamin, Lucas, Carolina, Klein, Jon, Silva, Julio, Mao, Tianyang, Oh, Ji Eun, Tokuyama, Maria, Lu, Peiwen, Venkataraman, Arvind, Park, Annsea, Liu, Feimei, Meir, Amit, Sun, Jonathan, Wang, Eric Y., Casanovas-Massana, Arnau, Wyllie, Anne L., Vogels, Chantal B. F., Earnest, Rebecca, Lapidus, Sarah, Ott, Isabel M., Moore, Adam J., Shaw, Albert, Fournier, John B., Odio, Camila D., Farhadian, Shelli, Dela Cruz, Charles, Grubaugh, Nathan D., Schulz, Wade L., Ring, Aaron M., Ko, Albert I., Omer, Saad B., Iwasaki, Akiko

Get full text

Assessment of Clinical Effectiveness of BNT162b2 COVID-19 Vaccine in US Adolescents by Oliveira, Carlos R, Niccolai, Linda M, Sheikha, Hassan, Elmansy, Lina, Kalinich, Chaney C, Grubaugh, Nathan D, Shapiro, Eugene D

Get full text

An outbreak of SARS‐CoV‐2 on a transplant unit in the early vaccination era by Roberts, Scott C., Foppiano Palacios, Carlo, Grubaugh, Nathan D., Alpert, Tara, Ott, Isabel M., Breban, Mallery I., Martinello, Richard A., Smith, Cindy, Davis, Matthew W., Mcmanus, Dayna, Tirmizi, Samad, Topal, Jeffrey E., Azar, Marwan M., Malinis, Maricar

Get full text

High-resolution epitope mapping and characterization of SARS-CoV-2 antibodies in large cohorts of subjects with COVID-19 by Haynes, Winston A., Kamath, Kathy, Bozekowski, Joel, Baum-Jones, Elisabeth, Campbell, Melissa, Casanovas-Massana, Arnau, Daugherty, Patrick S., Dela Cruz, Charles S., Dhal, Abhilash, Farhadian, Shelli F., Fitzgibbons, Lynn, Fournier, John, Jhatro, Michael, Jordan, Gregory, Klein, Jon, Lucas, Carolina, Kessler, Debra, Luchsinger, Larry L., Martinez, Brian, Catherine Muenker, M., Pischel, Lauren, Reifert, Jack, Sawyer, Jaymie R., Waitz, Rebecca, Wunder, Elsio A., Zhang, Minlu, Iwasaki, Akiko, Ko, Albert, Shon, John C.

Get full text

An AI-powered patient triage platform for future viral outbreaks using COVID-19 as a disease model by Charkoftaki, Georgia, Aalizadeh, Reza, Santos-Neto, Alvaro, Tan, Wan Ying, Davidson, Emily A, Nikolopoulou, Varvara, Wang, Yewei, Thompson, Brian, Furnary, Tristan, Chen, Ying, Wunder, Elsio A, Coppi, Andreas, Schulz, Wade, Iwasaki, Akiko, Pierce, Richard W, Cruz, Charles S Dela, Desir, Gary V, Kaminski, Naftali, Farhadian, Shelli, Veselkov, Kirill, Datta, Rupak, Campbell, Melissa, Thomaidis, Nikolaos S, Ko, Albert I, Thompson, David C, Vasiliou, Vasilis

Get full text