Role of conformational sampling in computing mutation-induced changes in protein structure and stability by Kellogg, Elizabeth H., Leaver-Fay, Andrew, Baker, David

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Stabilizing proteins, simplified: A Rosetta‐based webtool for predicting favorable mutations by Thieker, David F., Maguire, Jack B., Kudlacek, Stephan T., Leaver‐Fay, Andrew, Lyskov, Sergey, Kuhlman, Brian

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Computational protein design with explicit consideration of surface hydrophobic patches by Jacak, Ron, Leaver-Fay, Andrew, Kuhlman, Brian

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The Rosetta All-Atom Energy Function for Macromolecular Modeling and Design by Alford, Rebecca F, Leaver-Fay, Andrew, Jeliazkov, Jeliazko R, O’Meara, Matthew J, DiMaio, Frank P, Park, Hahnbeom, Shapovalov, Maxim V, Renfrew, P. Douglas, Mulligan, Vikram K, Kappel, Kalli, Labonte, Jason W, Pacella, Michael S, Bonneau, Richard, Bradley, Philip, Dunbrack, Roland L, Das, Rhiju, Baker, David, Kuhlman, Brian, Kortemme, Tanja, Gray, Jeffrey J

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Structure-guided forcefield optimization by Song, Yifan, Tyka, Michael, Leaver-Fay, Andrew, Thompson, James, Baker, David

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Foldit Standalone: a video game-derived protein structure manipulation interface using Rosetta by Kleffner, Robert, Flatten, Jeff, Leaver-Fay, Andrew, Baker, David, Siegel, Justin B, Khatib, Firas, Cooper, Seth

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De novo enzyme design using Rosetta3 by Richter, Florian, Leaver-Fay, Andrew, Khare, Sagar D, Bjelic, Sinisa, Baker, David

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Modeling symmetric macromolecular structures in Rosetta3 by DiMaio, Frank, Leaver-Fay, Andrew, Bradley, Phil, Baker, David, André, Ingemar

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RosettaScripts: a scripting language interface to the Rosetta macromolecular modeling suite by Fleishman, Sarel J, Leaver-Fay, Andrew, Corn, Jacob E, Strauch, Eva-Maria, Khare, Sagar D, Koga, Nobuyasu, Ashworth, Justin, Murphy, Paul, Richter, Florian, Lemmon, Gordon, Meiler, Jens, Baker, David

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Generation of bispecific IgG antibodies by structure-based design of an orthogonal Fab interface by Lewis, Steven M, Wu, Xiufeng, Pustilnik, Anna, Sereno, Arlene, Huang, Flora, Rick, Heather L, Guntas, Gurkan, Leaver-Fay, Andrew, Smith, Eric M, Ho, Carolyn, Hansen-Estruch, Christophe, Chamberlain, Aaron K, Truhlar, Stephanie M, Conner, Elaine M, Atwell, Shane, Kuhlman, Brian, Demarest, Stephen J

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SwiftLib: rapid degenerate-codon-library optimization through dynamic programming by Jacobs, Timothy M, Yumerefendi, Hayretin, Kuhlman, Brian, Leaver-Fay, Andrew

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Lumbar disc space height in relation to neural foraminal dimensions and patient characteristics: A morphometric analysis from L1-S1 using computed tomography by Shin, David, Vyhmeister, Ethan, Im, Daniel, Fay, Andrew, Faehner, Owen, Cabrera, Andrew, Bouterse, Alexander, Seo, Lauren, Bedward, Derran, Carter, Mei, Carter, Davis, Razzouk, Jacob, Ramos, Omar, Wycliffe, Nathaniel, Cheng, Wayne, Danisa, Olumide

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Better together: Elements of successful scientific software development in a distributed collaborative community by Koehler Leman, Julia, Weitzner, Brian D, Renfrew, P Douglas, Lewis, Steven M, Moretti, Rocco, Watkins, Andrew M, Mulligan, Vikram Khipple, Lyskov, Sergey, Adolf-Bryfogle, Jared, Labonte, Jason W, Krys, Justyna, Bystroff, Christopher, Schief, William, Gront, Dominik, Schueler-Furman, Ora, Baker, David, Bradley, Philip, Dunbrack, Roland, Kortemme, Tanja, Leaver-Fay, Andrew, Strauss, Charlie E M, Meiler, Jens, Kuhlman, Brian, Gray, Jeffrey J, Bonneau, Richard

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A generic program for multistate protein design by Leaver-Fay, Andrew, Jacak, Ron, Stranges, P Benjamin, Kuhlman, Brian

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A cyber-linked undergraduate research experience in computational biomolecular structure prediction and design by Alford, Rebecca F, Leaver-Fay, Andrew, Gonzales, Lynda, Dolan, Erin L, Gray, Jeffrey J

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Adding diverse noncanonical backbones to rosetta: enabling peptidomimetic design by Drew, Kevin, Renfrew, P Douglas, Craven, Timothy W, Butterfoss, Glenn L, Chou, Fang-Chieh, Lyskov, Sergey, Bullock, Brooke N, Watkins, Andrew, Labonte, Jason W, Pacella, Michael, Kilambi, Krishna Praneeth, Leaver-Fay, Andrew, Kuhlman, Brian, Gray, Jeffrey J, Bradley, Philip, Kirshenbaum, Kent, Arora, Paramjit S, Das, Rhiju, Bonneau, Richard

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More games: recommendations for methodological improvements when evaluating sun-protection behaviors by Fay, Andrew, Rundle, Chandler W., Stamey, Christopher

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Predicting protein structures with a multiplayer online game by Baker, David, Popovi, Zoran, Barbero, Janos, Lee, Jeehyung, Khatib, Firas, players, Foldit, Treuille, Adrien, Beenen, Michael, Cooper, Seth, Leaver-Fay, Andrew

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Does BMI Predict Zinc Deficiency and Its Association with Anemia? by Hanson, Zachary D, Hagele, Adam, Borecky, Michael, Mirshahidi, Saied, Fay, Andrew, Boghossain, Raffi, Akhtari, Mojtaba

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Zinc Deficiency Anemia Associated with Proton Pump Inhibition by Hanson, Zachary D, Hagele, Adam, Borecky, Michael, Fay, Andrew, Mirshahidi, Saied, Boghossain, Raffi, Akhtari, Mojtaba

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