Next generation sequencing reveals the expression of a unique miRNA profile in response to a gram-positive bacterial infection by Lawless, Nathan, Foroushani, Amir B K, McCabe, Matthew S, O'Farrelly, Cliona, Lynn, David J

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Posttranscriptional regulation of human endogenous retroviruses by RNA-binding motif protein 4, RBM4 by Foroushani, Amir K., Chim, Bryan, Wong, Madeline, Rastegar, Andre, Smith, Patrick T., Wang, Saifeng, Barbian, Kent, Martens, Craig, Hafner, Markus, Muljo, Stefan A.

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InnateDB: systems biology of innate immunity and beyond--recent updates and continuing curation by Breuer, Karin, Foroushani, Amir K, Laird, Matthew R, Chen, Carol, Sribnaia, Anastasia, Lo, Raymond, Winsor, Geoffrey L, Hancock, Robert E W, Brinkman, Fiona S L, Lynn, David J

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Curating the innate immunity interactome by Lynn, David J, Chan, Calvin, Naseer, Misbah, Yau, Melissa, Lo, Raymond, Sribnaia, Anastasia, Ring, Giselle, Que, Jaimmie, Wee, Kathleen, Winsor, Geoffrey L, Laird, Matthew R, Breuer, Karin, Foroushani, Amir K, Brinkman, Fiona S L, Hancock, Robert E W

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Pathway-GPS and SIGORA: identifying relevant pathways based on the over-representation of their gene-pair signatures by Foroushani, Amir B K, Brinkman, Fiona S L, Lynn, David J

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Profiling microRNA expression in bovine alveolar macrophages using RNA-seq by Vegh, Peter, Foroushani, Amir B.K., Magee, David A., McCabe, Matthew S., Browne, John A., Nalpas, Nicolas C., Conlon, Kevin M., Gordon, Stephen V., Bradley, Daniel G., MacHugh, David E., Lynn, David J.

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The role of MATRIN3 (MATR3) in innate immune response by Islam, Zohirul, Chim, Bryan, Suzawa, Masataka, Cutrona, Nicholas, Smith, Patrick T., Foroushani, Amir K., Hafner, Markus, Muljo, Stefan A.

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Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen by Menden, Michael P., Wang, Dennis, Mason, Mike J., Szalai, Bence, Bulusu, Krishna C., Guan, Yuanfang, Yu, Thomas, Kang, Jaewoo, Jeon, Minji, Wolfinger, Russ, Nguyen, Tin, Zaslavskiy, Mikhail, Jang, In Sock, Ghazoui, Zara, Ahsen, Mehmet Eren, Vogel, Robert, Neto, Elias Chaibub, Norman, Thea, Tang, Eric K. Y., Garnett, Mathew J., Veroli, Giovanni Y. Di, Fawell, Stephen, Stolovitzky, Gustavo, Guinney, Justin, Dry, Jonathan R., Saez-Rodriguez, Julio

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Regulatory T cell differentiation is controlled by αKG-induced alterations in mitochondrial metabolism and lipid homeostasis by Matias, Maria I., Yong, Carmen S., Foroushani, Amir, Goldsmith, Chloe, Mongellaz, Cédric, Sezgin, Erdinc, Levental, Kandice R., Talebi, Ali, Perrault, Julie, Rivière, Anais, Dehairs, Jonas, Delos, Océane, Bertand-Michel, Justine, Portais, Jean-Charles, Wong, Madeline, Marie, Julien C., Kelekar, Ameeta, Kinet, Sandrina, Zimmermann, Valérie S., Levental, Ilya, Yvan-Charvet, Laurent, Swinnen, Johannes V., Muljo, Stefan A., Hernandez-Vargas, Hector, Tardito, Saverio, Taylor, Naomi, Dardalhon, Valérie

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