Estimation of cell lineages in tumors from spatial transcriptomics data by Ru, Beibei, Huang, Jinlin, Zhang, Yu, Aldape, Kenneth, Jiang, Peng

Conserved Interferon-γ Signaling Drives Clinical Response to Immune Checkpoint Blockade Therapy in Melanoma by Grasso, Catherine S., Tsoi, Jennifer, Onyshchenko, Mykola, Abril-Rodriguez, Gabriel, Ross-Macdonald, Petra, Wind-Rotolo, Megan, Champhekar, Ameya, Medina, Egmidio, Torrejon, Davis Y., Shin, Daniel Sanghoon, Tran, Phuong, Kim, Yeon Joo, Puig-Saus, Cristina, Campbell, Katie, Vega-Crespo, Agustin, Quist, Michael, Martignier, Christophe, Luke, Jason J., Wolchok, Jedd D., Johnson, Douglas B., Chmielowski, Bartosz, Hodi, F. Stephen, Bhatia, Shailender, Sharfman, William, Urba, Walter J., Slingluff, Craig L., Diab, Adi, Haanen, John B.A.G., Algarra, Salvador Martin, Pardoll, Drew M., Anagnostou, Valsamo, Topalian, Suzanne L., Velculescu, Victor E., Speiser, Daniel E., Kalbasi, Anusha, Ribas, Antoni

Research-based PAM50 signature and long-term breast cancer survival by Pu, Minya, Messer, Karen, Davies, Sherri R., Vickery, Tammi L., Pittman, Emily, Parker, Barbara A., Ellis, Matthew J., Flatt, Shirley W., Marinac, Catherine R., Nelson, Sandahl H., Mardis, Elaine R., Pierce, John P., Natarajan, Loki

Spatial transcriptomics reveals substantial heterogeneity in triple-negative breast cancer with potential clinical implications by Wang, Xiaoxiao, Venet, David, Lifrange, Frédéric, Larsimont, Denis, Rediti, Mattia, Stenbeck, Linnea, Dupont, Floriane, Rouas, Ghizlane, Garcia, Andrea Joaquin, Craciun, Ligia, Buisseret, Laurence, Ignatiadis, Michail, Carausu, Marcela, Bhalla, Nayanika, Masarapu, Yuvarani, Villacampa, Eva Gracia, Franzén, Lovisa, Saarenpää, Sami, Kvastad, Linda, Thrane, Kim, Lundeberg, Joakim, Rothé, Françoise, Sotiriou, Christos

A multicentre, randomised, double-blind, placebo-controlled trial with the interleukin-1 receptor antagonist anakinra in patients with systemic-onset juvenile idiopathic arthritis... by Quartier, Pierre, Allantaz, Florence, Cimaz, Rolando, Pillet, Pascal, Messiaen, Claude, Bardin, Christophe, Bossuyt, Xavier, Boutten, Anne, Bienvenu, Jacques, Duquesne, Agnes, Richer, Olivier, Chaussabel, Damien, Mogenet, Agnes, Banchereau, Jacques, Treluyer, Jean-Marc, Landais, Paul, Pascual, Virginia

SARS-CoV-2 susceptibility and COVID-19 disease severity are associated with genetic variants affecting gene expression in a variety of tissues by D’Antonio, Matteo, Chwialkowska, Karolina, Tenesa, Albert, D’Mellow, Kenton, Aprile von Hohenstaufen, Kathrin, Eltoukhy, Madonna M., Yassen, Amr M., Moahmed, Hanteera S., Tobin, Martin D., Guyatt, Anna L., Hollox, Edward J., Sharififard, Bahareh, Abdollahi, Hamed, Puthanakit, Thanyawee, Suchartlikitwong, Pintip, Sodsai, Pimpayao, Alaamery, Manal, Aljawini, Nora, Albesher, Nour, Alahmadey, Ziab Z., Suliman, Bandar A., Al-Afghani, Hani, Massadeh, Salam, Muiño, Elena, Coto, Eliecer, Albaiceta, Guillermo M., Dietl, Beatriz, Martí-Fàbregas, Joan, Villalonga, Joan Montaner, Menéndez-Valladares, Paloma, Glessner, Joseph R., Forgetta, Vincenzo, Ghosh, Biswarup, Guiot, Julien, Guntz, Julien, Beguin, Yves, Claassen, Sabine, Malaise, Olivier, Daya, Michelle, Chavan, Sameer, Laisk, Triin, Alavere, Helene, Metsalu, Kristjan, Peterson, Pärt, Cortés, Beatriz, Torrents, David, Fallerini, Chiara, Doddato, Gabriella, Bruttini, Mirella, Pinto, Anna Maria, Bruno, Raffaele, Picchiotti, Nicola, Mantovani, Stefania, Bargagli, Elena, D’Alessandro, Miriana, Franchi, Federico, Cantarini, Luca, Tacconi, Danilo, Desanctis, Elena, Antinori, Andrea, Vergori, Alessandra, Baratti, Stefano, Menatti, Elisabetta, Trotta, Tullio, Martinelli, Enrico, Bachetti, Tiziana, Ceri, Stefano, Parati, Gianfranco, Ravaglia, Sabrina, Catena, Emanuele, Pessina, Gloria, Tumbarello, Mario, Guarnaccia, Alessandra, Boughton, Andrew P., Annis, Aubrey, Carey, Dave J., Gass, Matthew C., Abecasis, Goncalo R., Butterworth, Adam S., Nivard, Michel (M.G.), de geus, Eco (E.J.C.), Verma, Anurag, Ritchie, Marylyn D., Verma, Shefali S., Lucas, Anastasia, Karczewski, Konrad J., Walters, Raymond K., Palmer, Duncan S., Sarma, Gopal, Crook, Derrick W., Koelling, Nils, Moutsianas, Loukas, Rhodes, Daniel, Ball, Catherine A., Baltzell, Asher Haug, Gaddis, Michael, Noto, Keith, Tang, Lara, Nadkarni, Girish N., Choi, Sam

Synaptic genes are extensively downregulated across multiple brain regions in normal human aging and Alzheimer's disease by Berchtold, Nicole C., Coleman, Paul D., Cribbs, David H., Rogers, Joseph, Gillen, Daniel L., Cotman, Carl W.

Survival outcomes for patients with invasive lobular cancer by MammaPrint: Results from the MINDACT phase III trial by Metzger Filho, O., Cardoso, F., Poncet, C., Desmedt, C., Linn, S., Wesseling, J., Hilbers, F., Delaloge, S., Pierga, J.-Y., Brain, E., Vrijaldenhoven, S., Neijenhuis, P.A., Rutgers, E.J.Th, Piccart, M., van ’t Veer, L.J., Viale, G.

Using the 21‐gene assay from core needle biopsies to choose neoadjuvant therapy for breast cancer: A multicenter trial by Bear, Harry D., Wan, Wen, Robidoux, André, Rubin, Peter, Limentani, Steven, White, Richard L., Granfortuna, James, Hopkins, Judith O., Oldham, Dwight, Rodriguez, Angel, Sing, Amy P.

A robust six‐miRNA prognostic signature for head and neck squamous cell carcinoma by Zhao, Xinyuan, Cui, Li

Comparative transcriptomics revealed differential regulation of defense related genes in Brassica juncea leading to successful and unsuccessful infestation by aphid species by Duhlian, Lianthanzauva, Koramutla, Murali Krishna, Subramanian, S., Chamola, Rohit, Bhattacharya, Ramcharan

Singlet Oxygen-Induced Cell Death in Arabidopsis under High Light Stress is Controlled by OXI1 Kinase by Avignon Université (AU), Protéines de Protection des Végétaux (PPV), Institut de Biosciences et Biotechnologies d'Aix-Marseille (ex-IBEB) (BIAM), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Havaux, Michel, Biologie végétale et microbiologie environnementale - UMR7265 (BVME), Institut de Biosciences et Biotechnologies d'Aix-Marseille (ex-IBEB) (BIAM), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Environnement, Bioénergie, Microalgues et Plantes (EBMP), Institut de Biosciences et Biotechnologies d'Aix-Marseille (ex-IBEB) (BIAM), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Monnet, Fabien, Institut des Sciences des Plantes de Paris-Saclay (IPS2 (UMR_9213 / UMR_1403)), Institut National de la Recherche Agronomique (INRA)-Université Paris-Sud - Paris 11 (UP11)-Université Paris Diderot - Paris 7 (UPD7)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS), ANR-14-CE02-0010,SLOSAM,Signalisation du stress photooxydant dans les mécanismes d'acclimatation des plantes aux changements climatiques, Taconnat, Ludivine, L, Chevalier, Anne, Shumbe, Leonard, Institut de Biosciences et Biotechnologies d'Aix-Marseille (ex-IBEB) (BIAM), Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Legeret, Bertrand

Circulating microRNAs and prediction of asthma exacerbation in childhood asthma by Kho, Alvin T., McGeachie, Michael J., Moore, Kip G., Sylvia, Jody M., Weiss, Scott T., Tantisira, Kelan G.

Transcriptional Profiling of Tofacitinib Treatment in Juvenile Idiopathic Arthritis: Implications for Treatment Response Prediction by Eloseily, Esraa, Pickering, Alex, Dhakal, Sanjeev, Ruperto, Nicolino, Brunner, Hermine I., Grom, Alexei A., Thornton, Sherry

Cost-effectiveness analysis of multigene expression profiling assays to guide adjuvant therapy decisions in women with invasive early-stage breast cancer by Hannouf, Malek B., Zaric, Gregory S., Blanchette, Phillip, Brezden-Masley, Christine, Paulden, Mike, McCabe, Christopher, Raphael, Jacques, Brackstone, Muriel

Does RSClin provide additional information over classic clinico-pathologic scores (PREDICT 2.1, INFLUENCE 2.0, CTS5)? by Beltran-Bless, Ana-Alicia, Pond, Gregory R., Bayani, Jane, Barker, Sarah L., Spears, Melanie, Mallon, Elizabeth, Taylor, Karen J., Hasenburg, Annette, Markopoulos, Christos, Dirix, Luc, Meershoek-Klein Kranenbarg, Elma, van de Velde, Cornelis J.H., Rea, Daniel W., Vandermeer, Lisa, Hilton, John, Bartlett, John M.S., Clemons, Mark

Immune gene expression and response to chemotherapy in advanced breast cancer by Foukakis, Theodoros, Lövrot, John, Matikas, Alexios, Zerdes, Ioannis, Lorent, Julie, Tobin, Nick, Suzuki, Chikako, Brage, Suzanne Egyházi, Carlsson, Lena, Einbeigi, Zakaria, Linderholm, Barbro, Loman, Niklas, Malmberg, Martin, Fernö, Mårten, Skoog, Lambert, Bergh, Jonas, Hatschek, Thomas

Effects of breaking up prolonged sitting on skeletal muscle gene expression by Latouche, Celine, Jowett, Jeremy B. M., Carey, Andrew L., Bertovic, David A., Owen, Neville, Dunstan, David W., Kingwell, Bronwyn A.

Genome-wide profiling identifies a DNA methylation signature that associates with TET2 mutations in diffuse large B-cell lymphoma by Asmar, F., Punj, V., Christensen, J., Pedersen, M. T., Pedersen, A., Nielsen, A. B., Hother, C., Ralfkiaer, U., Brown, P., Ralfkiaer, E., Helin, K., Gronbaek, K.

Using metabolic profiling and gene expression analyses to explore molecular effects of replacing saturated fat with polyunsaturated fat—a randomized controlled dietary intervention... by Ulven, Stine M, Christensen, Jacob J, Nygård, Ottar, Svardal, Asbjørn, Leder, Lena, Ottestad, Inger, Lysne, Vegard, Laupsa-Borge, Johnny, Ueland, Per Magne, Midttun, Øivind, Meyer, Klaus, McCann, Adrian, Andersen, Lene F, Holven, Kirsten B