Reduced Nuclear Genomes Maintain High Gene Transcription Levels by Tanifuji, Goro, Onodera, Naoko T., Moore, Christa E., Archibald, John M.

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Single-cell genomics unveiled a cryptic cyanobacterial lineage with a worldwide distribution hidden by a dinoflagellate host by Nakayama, Takuro, Nomura, Mami, Takano, Yoshihito, Tanifuji, Goro, Shiba, Kogiku, Inaba, Kazuo, Inagaki, Yuji, Kawata, Masakado

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The complete plastid genome sequence of the secondarily nonphotosynthetic alga Cryptomonas paramecium: reduction, compaction, and accelerated evolutionary rate by Donaher, Natalie, Tanifuji, Goro, Onodera, Naoko T, Malfatti, Stephanie A, Chain, Patrick S G, Hara, Yoshiaki, Archibald, John M

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Nucleomorph genome diversity and its phylogenetic implications in cryptomonad algae by Tanifuji, Goro, Onodera, Naoko T., Hara, Yoshiaki

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Dinoflagellates with relic endosymbiont nuclei as models for elucidating organellogenesis by Sarai, Chihiro, Tanifuji, Goro, Nakayama, Takuro, Kamikawa, Ryoma, Takahashi, Kazuya, Yazaki, Euki, Matsuo, Eriko, Miyashita, Hideaki, Ishida, Ken-ichiro, Iwataki, Mitsunori, Inagaki, Yuji

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Fascinating strategies of marine benthic organisms to cope with emerging pollutant: Titanium dioxide nanoparticles by Ishitani, Yoshiyuki, Ciacci, Caterina, Ujiié, Yurika, Tame, Akihiro, Tiboni, Mattia, Tanifuji, Goro, Inagaki, Yuji, Frontalini, Fabrizio

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A practical assembly guideline for genomes with various levels of heterozygosity by Mochizuki, Takako, Sakamoto, Mika, Tanizawa, Yasuhiro, Nakayama, Takuro, Tanifuji, Goro, Kamikawa, Ryoma, Nakamura, Yasukazu

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Horizontally Acquired Nitrate Reductase Realized Kleptoplastic Photoautotrophy of Rapaza viridis by Maruyama, Moe, Kagamoto, Tsuyoshi, Matsumoto, Yuga, Onuma, Ryo, Miyagishima, Shin-ya, Tanifuji, Goro, Nakazawa, Masami, Kashiyama, Yuichiro

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Complete Nucleomorph Genome Sequence of the Nonphotosynthetic Alga Cryptomonas paramecium Reveals a Core Nucleomorph Gene Set by Tanifuji, Goro, Onodera, Naoko T., Wheeler, Travis J., Dlutek, Marlena, Donaher, Natalie, Archibald, John M.

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Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs by Curtis, Bruce A., Tanifuji, Goro, Burki, Fabien, Gruber, Ansgar, Irimia, Manuel, Maruyama, Shinichiro, Arias, Maria C., Ball, Steven G., Gile, Gillian H., Hirakawa, Yoshihisa, Hopkins, Julia F., Kuo, Alan, Rensing, Stefan A., Schmutz, Jeremy, Symeonidi, Aikaterini, Elias, Marek, Eveleigh, Robert J. M., Herman, Emily K., Klute, Mary J., Nakayama, Takuro, Oborník, Miroslav, Reyes-Prieto, Adrian, Armbrust, E. Virginia, Aves, Stephen J., Beiko, Robert G., Coutinho, Pedro, Dacks, Joel B., Durnford, Dion G., Fast, Naomi M., Green, Beverley R., Grisdale, Cameron J., Hempel, Franziska, Henrissat, Bernard, Höppner, Marc P., Ishida, Ken-Ichiro, Kim, Eunsoo, Kořený, Luděk, Kroth, Peter G., Liu, Yuan, Malik, Shehre-Banoo, Maier, Uwe G., McRose, Darcy, Mock, Thomas, Neilson, Jonathan A. D., Onodera, Naoko T., Poole, Anthony M., Pritham, Ellen J., Richards, Thomas A., Rocap, Gabrielle, Roy, Scott W., Sarai, Chihiro, Schaack, Sarah, Shirato, Shu, Slamovits, Claudio H., Spencer, David F., Suzuki, Shigekatsu, Worden, Alexandra Z., Zauner, Stefan, Barry, Kerrie, Bell, Callum, Bharti, Arvind K., Crow, John A., Grimwood, Jane, Kramer, Robin, Lindquist, Erika, Lucas, Susan, Salamov, Asaf, McFadden, Geoffrey I., Lane, Christopher E., Keeling, Patrick J., Gray, Michael W., Grigoriev, Igor V., Archibald, John M.

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Barthelonids represent a deep-branching metamonad clade with mitochondrion-related organelles predicted to generate no ATP by Yazaki, Euki, Kume, Keitaro, Shiratori, Takashi, Eglit, Yana, Tanifuji, Goro, Harada, Ryo, Simpson, Alastair G. B., Ishida, Ken-ichiro, Hashimoto, Tetsuo, Inagaki, Yuji

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Signs of the plastid: Enzymes involved in plastid-localized metabolic pathways in a eugregarine species by Yazaki, Euki, Miyata, Ryosuke, Chikami, Yasuhiko, Harada, Ryo, Kawakubo, Takashi, Tanifuji, Goro, Nakayama, Takuro, Yahata, Kensuke, Hashimoto, Tetsuo, Inagaki, Yuji

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Paratrypanosoma Is a Novel Early-Branching Trypanosomatid by Flegontov, Pavel, Votýpka, Jan, Skalický, Tomáš, Logacheva, Maria D., Penin, Aleksey A., Tanifuji, Goro, Onodera, Naoko T., Kondrashov, Alexey S., Volf, Petr, Archibald, John M., Lukeš, Julius

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Transcriptome data sets of free-living diplomonads, Trepomonas sp. and Hexamita sp by Kume, Keitaro, Gen, Tsubasa, Abe, Kazutaka, Komatsuzaki, Hiroshi, Yazaki, Euki, Tanifuji, Goro, Kamikawa, Ryoma, Inagaki, Yuji, Hashimoto, Tetsuo

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Microbial Eukaryotes that Lack Sterols by Takishita, Kiyotaka, Chikaraishi, Yoshito, Tanifuji, Goro, Ohkouchi, Naohiko, Hashimoto, Tetsuo, Fujikura, Katsunori, Roger, Andrew J.

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Reduced nuclear genomes maintain high gene transcription levels by Tanifuji, Goro, Onodera, Naoko T, Moore, Christa E, Archibald, John M

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Comparative Plastid Genomics of Cryptomonas Species Reveals Fine-Scale Genomic Responses to Loss of Photosynthesis by Tanifuji, Goro, Kamikawa, Ryoma, Moore, Christa E, Mills, Tyler, Onodera, Naoko T, Kashiyama, Yuichiro, Archibald, John M, Inagaki, Yuji, Hashimoto, Tetsuo

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Hyper-eccentric structural genes in the mitochondrial genome of the algal parasite Hemistasia phaeocysticola by Yabuki, Akinori, Tanifuji, Goro, Kusaka, Chiho, Takishita, Kiyotaka, Fujikura, Katsunori

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Gene Loss and Error-Prone RNA Editing in the Mitochondrion of Perkinsela, an Endosymbiotic Kinetoplastid by David, Vojtěch, Flegontov, Pavel, Gerasimov, Evgeny, Tanifuji, Goro, Hashimi, Hassan, Logacheva, Maria D, Maruyama, Shinichiro, Onodera, Naoko T, Gray, Michael W, Archibald, John M, Lukeš, Julius

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Complete nucleomorph genome sequence of the nonphotosynthetic alga Cryptomonas paramecium reveals a core nucleomorph gene set by Tanifuji, Goro, Onodera, Naoko T, Wheeler, Travis J, Dlutek, Marlena, Donaher, Natalie, Archibald, John M

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