Machine learning applied to enzyme turnover numbers reveals protein structural correlates and improves metabolic models by Heckmann, David, Lloyd, Colton J., Mih, Nathan, Ha, Yuanchi, Zielinski, Daniel C., Haiman, Zachary B., Desouki, Abdelmoneim Amer, Lercher, Martin J., Palsson, Bernhard O.

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MASSpy: Building, simulating, and visualizing dynamic biological models in Python using mass action kinetics by Haiman, Zachary B, Zielinski, Daniel C, Koike, Yuko, Yurkovich, James T, Palsson, Bernhard O

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iModulonMiner and PyModulon: Software for unsupervised mining of gene expression compendia by Sastry, Anand V, Yuan, Yuan, Poudel, Saugat, Rychel, Kevin, Yoo, Reo, Lamoureux, Cameron R, Li, Gaoyuan, Burrows, Joshua T, Chauhan, Siddharth, Haiman, Zachary B, Al Bulushi, Tahani, Seif, Yara, Palsson, Bernhard O, Zielinski, Daniel C

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A data-driven approach for timescale decomposition of biochemical reaction networks by Akbari, Amir, Haiman, Zachary B, Palsson, Bernhard O

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Network-level allosteric effects are elucidated by detailing how ligand-binding events modulate utilization of catalytic potentials by Yurkovich, James T, Alcantar, Miguel A, Haiman, Zachary B, Palsson, Bernhard O

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The mutational constraint spectrum quantified from variation in 141,456 humans by Karczewski, Konrad J., Francioli, Laurent C., Tiao, Grace, Cummings, Beryl B., Alföldi, Jessica, Wang, Qingbo, Collins, Ryan L., Laricchia, Kristen M., Ganna, Andrea, Birnbaum, Daniel P., Gauthier, Laura D., Brand, Harrison, Solomonson, Matthew, Watts, Nicholas A., Rhodes, Daniel, Singer-Berk, Moriel, England, Eleina M., Seaby, Eleanor G., Kosmicki, Jack A., Walters, Raymond K., Tashman, Katherine, Farjoun, Yossi, Banks, Eric, Poterba, Timothy, Wang, Arcturus, Seed, Cotton, Whiffin, Nicola, Chong, Jessica X., Samocha, Kaitlin E., Pierce-Hoffman, Emma, Zappala, Zachary, O’Donnell-Luria, Anne H., Minikel, Eric Vallabh, Weisburd, Ben, Lek, Monkol, Ware, James S., Vittal, Christopher, Armean, Irina M., Bergelson, Louis, Cibulskis, Kristian, Connolly, Kristen M., Covarrubias, Miguel, Donnelly, Stacey, Ferriera, Steven, Gabriel, Stacey, Gentry, Jeff, Gupta, Namrata, Jeandet, Thibault, Kaplan, Diane, Llanwarne, Christopher, Munshi, Ruchi, Novod, Sam, Petrillo, Nikelle, Roazen, David, Ruano-Rubio, Valentin, Saltzman, Andrea, Schleicher, Molly, Soto, Jose, Tibbetts, Kathleen, Tolonen, Charlotte, Wade, Gordon, Talkowski, Michael E., Neale, Benjamin M., Daly, Mark J., MacArthur, Daniel G.

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Heterogeneity of breast cancer associations with five susceptibility loci by clinical and pathological characteristics by Garcia-Closas, Montserrat, Hall, Per, Nevanlinna, Heli, Pooley, Karen, Morrison, Jonathan, Richesson, Douglas A, Bojesen, Stig E, Nordestgaard, Børge G, Axelsson, Christen K, Arias, Jose I, Milne, Roger L, Ribas, Gloria, González-Neira, Anna, Benítez, Javier, Zamora, Pilar, Brauch, Hiltrud, Justenhoven, Christina, Hamann, Ute, Ko, Yon-Dschun, Bruening, Thomas, Haas, Susanne, Dörk, Thilo, Schürmann, Peter, Hillemanns, Peter, Bogdanova, Natalia, Bremer, Michael, Karstens, Johann Hinrich, Fagerholm, Rainer, Aaltonen, Kirsimari, Aittomäki, Kristiina, von Smitten, Karl, Blomqvist, Carl, Mannermaa, Arto, Uusitupa, Matti, Eskelinen, Matti, Tengström, Maria, Kosma, Veli-Matti, Kataja, Vesa, Chenevix-Trench, Georgia, Spurdle, Amanda B, Beesley, Jonathan, Chen, Xiaoqing, Devilee, Peter, van Asperen, Christi J, Jacobi, Catharina E, Tollenaar, Rob A E M, Huijts, Petra E A, Klijn, Jan G M, Chang-Claude, Jenny, Kropp, Silke, Slanger, Tracy, Flesch-Janys, Dieter, Mutschelknauss, Elke, Salazar, Ramona, Wang-Gohrke, Shan, Couch, Fergus, Goode, Ellen L, Olson, Janet E, Vachon, Celine, Fredericksen, Zachary S, Giles, Graham G, Baglietto, Laura, Severi, Gianluca, Hopper, John L, English, Dallas R, Southey, Melissa C, Haiman, Christopher A, Henderson, Brian E, Kolonel, Laurence N, Le Marchand, Loic, Stram, Daniel O, Hunter, David J, Hankinson, Susan E, Cox, David G, Tamimi, Rulla, Kraft, Peter, Sherman, Mark E, Chanock, Stephen J, Lissowska, Jolanta, Brinton, Louise A, Peplonska, Beata, Hooning, Maartje J, Meijers-Heijboer, Han, Collee, J Margriet, van den Ouweland, Ans, Uitterlinden, Andre G, Liu, Jianjun, Lin, Low Yen, Yuqing, Li, Humphreys, Keith, Czene, Kamila, Cox, Angela, Balasubramanian, Sabapathy P, Cross, Simon S, Reed, Malcolm W R, Blows, Fiona, Driver, Kristy, Dunning, Alison, Tyrer, Jonathan

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Addendum: The mutational constraint spectrum quantified from variation in 141,456 humans by Gudmundsson, Sanna, Karczewski, Konrad J., Francioli, Laurent C., Tiao, Grace, Cummings, Beryl B., Alföldi, Jessica, Wang, Qingbo, Collins, Ryan L., Laricchia, Kristen M., Ganna, Andrea, Birnbaum, Daniel P., Gauthier, Laura D., Brand, Harrison, Solomonson, Matthew, Watts, Nicholas A., Rhodes, Daniel, Singer-Berk, Moriel, England, Eleina M., Seaby, Eleanor G., Kosmicki, Jack A., Walters, Raymond K., Tashman, Katherine, Farjoun, Yossi, Banks, Eric, Poterba, Timothy, Wang, Arcturus, Seed, Cotton, Whiffin, Nicola, Chong, Jessica X., Samocha, Kaitlin E., Pierce-Hoffman, Emma, Zappala, Zachary, O’Donnell-Luria, Anne H., Minikel, Eric Vallabh, Weisburd, Ben, Lek, Monkol, Ware, James S., Vittal, Christopher, Armean, Irina M., Bergelson, Louis, Cibulskis, Kristian, Connolly, Kristen M., Covarrubias, Miguel, Donnelly, Stacey, Ferriera, Steven, Gabriel, Stacey, Gentry, Jeff, Gupta, Namrata, Jeandet, Thibault, Kaplan, Diane, Llanwarne, Christopher, Munshi, Ruchi, Novod, Sam, Petrillo, Nikelle, Roazen, David, Ruano-Rubio, Valentin, Saltzman, Andrea, Schleicher, Molly, Soto, Jose, Tibbetts, Kathleen, Tolonen, Charlotte, Wade, Gordon, Talkowski, Michael E., Neale, Benjamin M., Daly, Mark J., MacArthur, Daniel G.

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Author Correction: The mutational constraint spectrum quantified from variation in 141,456 humans by Karczewski, Konrad J., Francioli, Laurent C., Tiao, Grace, Cummings, Beryl B., Alföldi, Jessica, Wang, Qingbo, Collins, Ryan L., Laricchia, Kristen M., Ganna, Andrea, Birnbaum, Daniel P., Gauthier, Laura D., Brand, Harrison, Solomonson, Matthew, Watts, Nicholas A., Rhodes, Daniel, Singer-Berk, Moriel, England, Eleina M., Seaby, Eleanor G., Kosmicki, Jack A., Walters, Raymond K., Tashman, Katherine, Farjoun, Yossi, Banks, Eric, Poterba, Timothy, Wang, Arcturus, Seed, Cotton, Whiffin, Nicola, Chong, Jessica X., Samocha, Kaitlin E., Pierce-Hoffman, Emma, Zappala, Zachary, O’Donnell-Luria, Anne H., Minikel, Eric Vallabh, Weisburd, Ben, Lek, Monkol, Ware, James S., Vittal, Christopher, Armean, Irina M., Bergelson, Louis, Cibulskis, Kristian, Connolly, Kristen M., Covarrubias, Miguel, Donnelly, Stacey, Ferriera, Steven, Gabriel, Stacey, Gentry, Jeff, Gupta, Namrata, Jeandet, Thibault, Kaplan, Diane, Llanwarne, Christopher, Munshi, Ruchi, Novod, Sam, Petrillo, Nikelle, Roazen, David, Ruano-Rubio, Valentin, Saltzman, Andrea, Schleicher, Molly, Soto, Jose, Tibbetts, Kathleen, Tolonen, Charlotte, Wade, Gordon, Talkowski, Michael E., Neale, Benjamin M., Daly, Mark J., MacArthur, Daniel G.

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