A tailored approach to fusion transcript identification increases diagnosis of rare inherited disease by Oliver, Gavin R, Tang, Xiaojia, Schultz-Rogers, Laura E, Vidal-Folch, Noemi, Jenkinson, W Garrett, Schwab, Tanya L, Gaonkar, Krutika, Cousin, Margot A, Nair, Asha, Basu, Shubham, Chanana, Pritha, Oglesbee, Devin, Klee, Eric W

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BOREALIS: an R/Bioconductor package to detect outlier methylation from bisulfite sequencing data [version 1; peer review: 2 approved with reservations] by Oliver, Gavin R., Jenkinson, W. Garrett, Olson, Rory J., Schultz-Rogers, Laura E., Klee, Eric W.

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On Constructing Thermodynamically Consistent Parametrizations of Kinetic Models by Jenkinson, W Garrett, Goutsias, John

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A screening method for dimensionality reduction in biochemical reaction system calibration by Jenkinson, W G, Goutsias, J

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LeafCutterMD: an algorithm for outlier splicing detection in rare diseases by Jenkinson, Garrett, Li, Yang I, Basu, Shubham, Cousin, Margot A, Oliver, Gavin R, Klee, Eric W

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The NASA Twins Study: A multidimensional analysis of a year-long human spaceflight by Garrett-Bakelman, Francine E, Darshi, Manjula, Green, Stefan J, Gur, Ruben C, Lin, Ling, Macias, Brandon R, McKenna, Miles J, Meydan, Cem, Mishra, Tejaswini, Nasrini, Jad, Piening, Brian D, Rizzardi, Lindsay F, Sharma, Kumar, Siamwala, Jamila H, Taylor, Lynn, Vitaterna, Martha Hotz, Afkarian, Maryam, Afshinnekoo, Ebrahim, Ahadi, Sara, Ambati, Aditya, Arya, Maneesh, Bezdan, Daniela, Callahan, Colin M, Chen, Songjie, Choi, Augustine M K, Chlipala, George E, Contrepois, Kévin, Covington, Marisa, Crucian, Brian E, De Vivo, Immaculata, Dinges, David F, Ebert, Douglas J, Feinberg, Jason I, Gandara, Jorge A, George, Kerry A, Goutsias, John, Grills, George S, Hargens, Alan R, Heer, Martina, Hillary, Ryan P, Hoofnagle, Andrew N, Hook, Vivian Y H, Jenkinson, Garrett, Jiang, Peng, Keshavarzian, Ali, Laurie, Steven S, Lee-McMullen, Brittany, Lumpkins, Sarah B, MacKay, Matthew, Maienschein-Cline, Mark G, Melnick, Ari M, Moore, Tyler M, Nakahira, Kiichi, Patel, Hemal H, Pietrzyk, Robert, Rao, Varsha, Saito, Rintaro, Salins, Denis N, Schilling, Jan M, Sears, Dorothy D, Sheridan, Caroline K, Stenger, Michael B, Tryggvadottir, Rakel, Urban, Alexander E, Vaisar, Tomas, Van Espen, Benjamin, Zhang, Jing, Ziegler, Michael G, Zwart, Sara R, Charles, John B, Kundrot, Craig E, Scott, Graham B I, Bailey, Susan M, Basner, Mathias, Feinberg, Andrew P, Lee, Stuart M C, Mason, Christopher E, Mignot, Emmanuel, Rana, Brinda K, Smith, Scott M, Snyder, Michael P, Turek, Fred W

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Computational Detection of Known Pathogenic Gene Fusions in a Normal Tissue Database and Implications for Genetic Disease Research by Oliver, Gavin Robert, Jenkinson, Garrett, Klee, Eric W

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Identification of skewed X chromosome inactivation using exome and transcriptome sequencing in patients with suspected rare genetic disease by Fadra, Numrah, Schultz-Rogers, Laura E, Chanana, Pritha, Cousin, Margot A, Macke, Erica L, Ferrer, Alejandro, Pinto E Vairo, Filippo, Olson, Rory J, Oliver, Gavin R, Mulvihill, Lindsay A, Jenkinson, Garrett, Klee, Eric W

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COVID-19 Mortality Prediction From Deep Learning in a Large Multistate Electronic Health Record and Laboratory Information System Data Set: Algorithm Development and Validation by Sankaranarayanan, Saranya, Balan, Jagadheshwar, Walsh, Jesse R, Wu, Yanhong, Minnich, Sara, Piazza, Amy, Osborne, Collin, Oliver, Gavin R, Lesko, Jessica, Bates, Kathy L, Khezeli, Kia, Block, Darci R, DiGuardo, Margaret, Kreuter, Justin, O’Horo, John C, Kalantari, John, Klee, Eric W, Salama, Mohamed E, Kipp, Benjamin, Morice, William G, Jenkinson, Garrett

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Identification of gene regulatory networks associated with breast cancer patient survival using an interpretable deep neural network model by Wang, Xue, Sarangi, Vivekananda, Wickland, Daniel P., Li, Shaoyu, Chen, Duan, Aubrey Thompson, E., Jenkinson, Garrett, Asmann, Yan W.

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SeekFusion - A Clinically Validated Fusion Transcript Detection Pipeline for PCR-Based Next-Generation Sequencing of RNA by Balan, Jagadheshwar, Jenkinson, Garrett, Nair, Asha, Saha, Neiladri, Koganti, Tejaswi, Voss, Jesse, Zysk, Christopher, Barr Fritcher, Emily G., Ross, Christian A., Giannini, Caterina, Raghunathan, Aditya, Kipp, Benjamin R., Jenkins, Robert, Ida, Cris, Halling, Kevin C., Blackburn, Patrick R., Dasari, Surendra, Oliver, Gavin R., Klee, Eric W.

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εγ-Thalassemia, a New Hemoglobinopathy Category by Oliveira, Jennifer L, Thompson, Christineil H, Saravanaperumal, Siva Arumugam, Koganti, Tejaswi, Jenkinson, Garrett, Hein, Molly S, Kohorst, Mira A, Hasadsri, Linda, Nguyen, Phuong L, Matern, Dietrich, Kipp, Benjamin R, Klee, Eric W, Wieben, Eric D, Hoyer, James D, Rangan, Aruna

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An intragenic duplication of TRPS1 leading to abnormal transcripts and causing trichorhinophalangeal syndrome type I by Zepeda-Mendoza, Cinthya J, Cousin, Margot A, Basu, Shubham, Jenkinson, Garrett, Oliver, Gavin, Pittock, Siobhan T, Baughn, Linda B, Klee, Eric W, Babovic-Vuksanovic, Dusica

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Universally Rank Consistent Ordinal Regression in Neural Networks by Jenkinson, Garrett, Oliver, Gavin R, Khezeli, Kia, Kalantari, John, Klee, Eric W

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