TIANA: transcription factors cooperativity inference analysis with neural attention by Li, Rick Z, Han, Claudia Z, Glass, Christopher K

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Niche-Specific Reprogramming of Epigenetic Landscapes Drives Myeloid Cell Diversity in Nonalcoholic Steatohepatitis by Seidman, Jason S., Troutman, Ty D., Sakai, Mashito, Gola, Anita, Spann, Nathanael J., Bennett, Hunter, Bruni, Cassi M., Ouyang, Zhengyu, Li, Rick Z., Sun, Xiaoli, Vu, BaoChau T., Pasillas, Martina P., Ego, Kaori M., Gosselin, David, Link, Verena M., Chong, Ling-Wa, Evans, Ronald M., Thompson, Bonne M., McDonald, Jeffrey G., Hosseini, Mojgan, Witztum, Joseph L., Germain, Ronald N., Glass, Christopher K.

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DNA methyltransferase 3 alpha and TET methylcytosine dioxygenase 2 restrain mitochondrial DNA-mediated interferon signaling in macrophages by Cobo, Isidoro, Tanaka, Tiffany N., Chandra Mangalhara, Kailash, Lana, Addison, Yeang, Calvin, Han, Claudia, Schlachetzki, Johannes, Challcombe, Jean, Fixsen, Bethany R., Sakai, Mashito, Li, Rick Z., Fields, Hannah, Mokry, Michal, Tsai, Randy G., Bejar, Rafael, Prange, Koen, de Winther, Menno, Shadel, Gerald S., Glass, Christopher K.

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Systematic analysis of naturally occurring insertions and deletions that alter transcription factor spacing identifies tolerant and sensitive transcription factor pairs by Shen, Zeyang, Li, Rick Z, Prohaska, Thomas A, Hoeksema, Marten A, Spann, Nathan J, Tao, Jenhan, Fonseca, Gregory J, Le, Thomas, Stolze, Lindsey K, Sakai, Mashito, Romanoski, Casey E, Glass, Christopher K

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Human microglia maturation is underpinned by specific gene regulatory networks by Han, Claudia Z., Li, Rick Z., Hansen, Emily, Trescott, Samantha, Fixsen, Bethany R., Nguyen, Celina T., Mora, Cristina M., Spann, Nathanael J., Bennett, Hunter R., Poirion, Olivier, Buchanan, Justin, Warden, Anna S., Xia, Bing, Schlachetzki, Johannes C.M., Pasillas, Martina P., Preissl, Sebastian, Wang, Allen, O’Connor, Carolyn, Shriram, Shreya, Kim, Roy, Schafer, Danielle, Ramirez, Gabriela, Challacombe, Jean, Anavim, Samuel A., Johnson, Avalon, Gupta, Mihir, Glass, Ian A., Levy, Michael L., Haim, Sharona Ben, Gonda, David D., Laurent, Louise, Hughes, Jennifer F., Page, David C., Blurton-Jones, Mathew, Glass, Christopher K., Coufal, Nicole G.

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Niche-Specific Re-Programming of Epigenetic Landscapes Drives Myeloid Cell Diversity in Nonalcoholic Steatohepatitis by Seidman, Jason S., Troutman, Ty D., Sakai, Mashito, Gola, Anita, Spann, Nathanael J., Bennett, Hunter, Bruni, Cassi M., Ouyang, Zhengyu, Li, Rick Z., Sun, Xiaoli, Vu, BaoChau T., Pasillas, Martina P., Ego, Kaori M., Gosselin, David, Link, Verena M., Chong, Ling-Wa, Evans, Ronald M., Thompson, Bonne M., McDonald, Jeffrey G., Hosseini, Mojgan, Witztum, Joseph L., Germain, Ronald N., Glass, Christopher K.

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An exercise-inducible metabolite that suppresses feeding and obesity by Li, Veronica L., He, Yang, Contrepois, Kévin, Liu, Hailan, Kim, Joon T., Wiggenhorn, Amanda L., Tanzo, Julia T., Tung, Alan Sheng-Hwa, Lyu, Xuchao, Zushin, Peter-James H., Jansen, Robert S., Michael, Basil, Loh, Kang Yong, Yang, Andrew C., Carl, Christian S., Voldstedlund, Christian T., Wei, Wei, Terrell, Stephanie M., Moeller, Benjamin C., Arthur, Rick M., Wallis, Gareth A., van de Wetering, Koen, Stahl, Andreas, Kiens, Bente, Richter, Erik A., Banik, Steven M., Snyder, Michael P., Xu, Yong, Long, Jonathan Z.

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Occurrence of Intestinal Parasites and Its Impact on Growth Performance and Carcass Traits of Pigs Raised Under Near-Organic Conditions by Li, Yuzhi Z, Hernandez, Alexander D, Major, Sara, Carr, Rick

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Avidity engineering of human heavy-chain-only antibodies mitigates neutralization resistance of SARS-CoV-2 variants by Du, Wenjuan, Janssens, Rick, Mykytyn, Anna Z, Li, Wentao, Drabek, Dubravka, van Haperen, Rien, Chatziandreou, Marianthi, Rissmann, Melanie, van der Lee, Joline, van Dortmondt, Melissa, Martin, Itziar Serna, van Kuppeveld, Frank J M, Hurdiss, Daniel L, Haagmans, Bart L, Grosveld, Frank, Bosch, Berend-Jan

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Gut Microbiome Faecalibacterium Abundance in Patients with Plasma Cell Disorders Undergoing Autologous Hematopoietic Stem Cell Transplant Is Associated with Progression Free Surviv... by Dean, Erin A., Roy, Arkaprava, Lin, Rick Y., Gharaibeh, Raad Z., Li, Derek M., Gauthier, Josee, Jobin, Christian, Al-Mansour, Zeina A., Wingard, John R.

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Large libraries of single-chain trimer peptide-MHCs enable antigen-specific CD8+ T cell discovery and analysis by Chour, William, Choi, Jongchan, Xie, Jingyi, Chaffee, Mary E., Schmitt, Thomas M., Finton, Kathryn, DeLucia, Diana C., Xu, Alexander M., Su, Yapeng, Chen, Daniel G., Zhang, Rongyu, Yuan, Dan, Hong, Sunga, Ng, Alphonsus H. C., Butler, Jonah Z., Edmark, Rick A., Jones, Lesley C., Murray, Kim M., Peng, Songming, Li, Guideng, Strong, Roland K., Lee, John K., Goldman, Jason D., Greenberg, Philip D., Heath, James R.

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Meta-analysis of genome-wide association studies in East Asian-ancestry populations identifies four new loci for body mass index by Wen, Wanqing, Zheng, Wei, Okada, Yukinori, Takeuchi, Fumihiko, Tabara, Yasuharu, Hwang, Joo-Yeon, Dorajoo, Rajkumar, Li, Huaixing, Tsai, Fuu-Jen, Yang, Xiaobo, He, Jiang, Wu, Ying, He, Meian, Zhang, Yi, Liang, Jun, Guo, Xiuqing, Sheu, Wayne Huey-Herng, Delahanty, Ryan, Guo, Xingyi, Kubo, Michiaki, Yamamoto, Ken, Ohkubo, Takayoshi, Go, Min Jin, Liu, Jian Jun, Gan, Wei, Chen, Ching-Chu, Gao, Yong, Li, Shengxu, Lee, Nanette R, Wu, Chen, Zhou, Xueya, Song, Huaidong, Yao, Jie, Lee, I-Te, Long, Jirong, Tsunoda, Tatsuhiko, Akiyama, Koichi, Takashima, Naoyuki, Cho, Yoon Shin, Ong, Rick Th, Lu, Ling, Chen, Chien-Hsiun, Tan, Aihua, Rice, Treva K, Adair, Linda S, Gui, Lixuan, Allison, Matthew, Lee, Wen-Jane, Cai, Qiuyin, Isomura, Minoru, Umemura, Satoshi, Kim, Young Jin, Seielstad, Mark, Hixson, James, Xiang, Yong-Bing, Isono, Masato, Kim, Bong-Jo, Sim, Xueling, Lu, Wei, Nabika, Toru, Lee, Juyoung, Lim, Wei-Yen, Gao, Yu-Tang, Takayanagi, Ryoichi, Kang, Dae-Hee, Wong, Tien Yin, Hsiung, Chao Agnes, Wu, I-Chien, Juang, Jyh-Ming Jimmy, Shi, Jiajun, Choi, Bo Youl, Aung, Tin, Hu, Frank, Kim, Mi Kyung, Lim, Wei Yen, Wang, Tzung-Dao, Shin, Min-Ho, Lee, Jeannette, Ji, Bu-Tian, Lee, Young-Hoon, Young, Terri L, Shin, Dong Hoon, Chun, Byung-Yeol, Cho, Myeong-Chan, Han, Bok-Ghee, Hwu, Chii-Min, Assimes, Themistocles L, Absher, Devin, Yan, Xiaofei, Kim, Eric, Kuo, Jane Z, Kwon, Soonil, Taylor, Kent D, Chen, Yii-Der I, Rotter, Jerome I, Qi, Lu, Zhu, Dingliang, Wu, Tangchun, Mohlke, Karen L, Gu, Dongfeng

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Comprehensive genomic characterization defines human glioblastoma genes and core pathways by McLendon, Roger, Friedman, Allan, Bigner, Darrell, Brat, Daniel J, M Mastrogianakis, Gena, Lehman, Norman, Aldape, Ken, Bogler, Oliver, Nazareth, Lynn, Hall, Otis, Zhu, Yiming, Jhangiani, Shalini, San Lucas, Anthony, Kovar, Christie, Dinh, Huyen, Santibanez, Jireh, Joshi, Vandita, Wilkinson, Jane, Onofrio, Robert, Ardlie, Kristin, Gabriel, Stacey, Ding, Li, McLellan, Michael D, Shi, Xiaoqi, Abbott, Rachel, Fulton, Lucinda, Meyer, Rick, Osborne, John R, Dunford-Shore, Brian H, Delehaunty, Kim, Swift, Gary, Pohl, Craig, Leong, Shin, Haipek, Carrie, Schmidt, Heather, Vickery, Tammi, Chinwalla, Asif, Weinstock, George M, Mardis, Elaine R, Verhaak, Roel GW, O'Kelly, Michael, Beroukhim, Rameen, Carter, Scott, Chiang, Derek, Gould, Josh, Korn, Josh, Mermel, Craig, Monti, Stefano, Nguyen, Huy, Parkin, Melissa, Stransky, Nicolas, Meyerson, Matthew, Protopopov, Alexei, Zhang, Jianhua, Perna, Ilana, Yao, Jun, Kim, Hyunsoo, Kohane, Isaac S, Seidman, Jon, Kucherlapati, Raju, Laird, Peter W, Cope, Leslie, Herman, James G, Weisenberger, Daniel J, Mi Yi, Joo, Southwick, Audrey, Aggarwal, Amita, Brooks, James D, Spellman, Paul T, Marr, Henry, Gi Choi, Yoon, Wang, Victoria, Robinson, Mark, Peng, Vivian, Fontenay, Gerald V, Parvin, Bahram, Speed, Terence P, Gray, Joe W, Brennan, Cameron, Olshen, Adam, Schultz, Nikolaus, Stukalov, Alexey, Cerami, Ethan, Qin, Li-Xuan, Ladanyi, Marc, Neil Hayes, D, Topal, Michael D, Shi, Yan, Penny, Robert, Lenkiewicz, Elizabeth, Morris, Scott, Kahn, Ari, Chen, Jessica, Nassau, David, Hickey, Erin, Vockley, Joseph, Vaught, Jim, Madhavan, Subhashree, Guyer, Mark, Thomson, Elizabeth

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Associations of outdoor fine particulate air pollution and cardiovascular disease in 157 436 individuals from 21 high-income, middle-income, and low-income countries (PURE): a pros... by Hystad, Perry, Larkin, Andrew, Rangarajan, Sumathy, AlHabib, Khalid F, Avezum, Álvaro, Calik, Kevser Burcu Tumerdem, Chifamba, Jephat, Dans, Antonio, Diaz, Rafael, du Plessis, Johan L, Gupta, Rajeev, Iqbal, Romaina, Khatib, Rasha, Kelishadi, Roya, Lanas, Fernando, Liu, Zhiguang, Lopez-Jaramillo, Patricio, Nair, Sanjeev, Poirier, Paul, Rahman, Omar, Rosengren, Annika, Swidan, Hany, Tse, Lap Ah, Wei, Li, Wielgosz, Andreas, Yeates, Karen, Yusoff, Khalid, Zatoński, Tomasz, Burnett, Rick, Yusuf, Salim, Brauer, Michael

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Integration of multiethnic fine-mapping and genomic annotation to prioritize candidate functional SNPs at prostate cancer susceptibility regions by Han, Ying, Hazelett, Dennis J, Wiklund, Fredrik, Schumacher, Fredrick R, Stram, Daniel O, Berndt, Sonja I, Wang, Zhaoming, Rand, Kristin A, Hoover, Robert N, Machiela, Mitchell J, Yeager, Merideth, Burdette, Laurie, Chung, Charles C, Hutchinson, Amy, Yu, Kai, Xu, Jianfeng, Travis, Ruth C, Key, Timothy J, Siddiq, Afshan, Canzian, Federico, Takahashi, Atsushi, Kubo, Michiaki, Stanford, Janet L, Kolb, Suzanne, Gapstur, Susan M, Diver, W Ryan, Stevens, Victoria L, Strom, Sara S, Pettaway, Curtis A, Al Olama, Ali Amin, Kote-Jarai, Zsofia, Eeles, Rosalind A, Yeboah, Edward D, Tettey, Yao, Biritwum, Richard B, Adjei, Andrew A, Tay, Evelyn, Truelove, Ann, Niwa, Shelley, Chokkalingam, Anand P, Isaacs, William B, Chen, Constance, Lindstrom, Sara, Le Marchand, Loic, Giovannucci, Edward L, Pomerantz, Mark, Long, Henry, Li, Fugen, Ma, Jing, Stampfer, Meir, John, Esther M, Ingles, Sue A, Kittles, Rick A, Murphy, Adam B, Blot, William J, Signorello, Lisa B, Zheng, Wei, Albanes, Demetrius, Virtamo, Jarmo, Weinstein, Stephanie, Nemesure, Barbara, Carpten, John, Leske, M Cristina, Wu, Suh-Yuh, Hennis, Anselm J M, Rybicki, Benjamin A, Neslund-Dudas, Christine, Hsing, Ann W, Chu, Lisa, Goodman, Phyllis J, Klein, Eric A, Zheng, S Lilly, Witte, John S, Casey, Graham, Riboli, Elio, Li, Qiyuan, Freedman, Matthew L, Hunter, David J, Gronberg, Henrik, Cook, Michael B, Nakagawa, Hidewaki, Kraft, Peter, Chanock, Stephen J, Easton, Douglas F, Henderson, Brian E, Coetzee, Gerhard A, Conti, David V, Haiman, Christopher A

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Real-time resolution of point mutations that cause phenovariance in mice by Wang, Tao, Zhan, Xiaowei, Bu, Chun-Hui, Lyon, Stephen, Pratt, David, Hildebrand, Sara, Choi, Jin Huk, Zhang, Zhao, Zeng, Ming, Wang, Kuan-wen, Turer, Emre, Chen, Zhe, Zhang, Duanwu, Yue, Tao, Wang, Ying, Shi, Hexin, Wang, Jianhui, Sun, Lei, SoRelle, Jeff, McAlpine, William, Hutchins, Noelle, Zhan, Xiaoming, Fina, Maggy, Gobert, Rochelle, Quan, Jiexia, Kreutzer, McKensie, Arnett, Stephanie, Hawkins, Kimberly, Leach, Ashley, Tate, Christopher, Daniel, Chad, Reyna, Carlos, Prince, Lauren, Davis, Sheila, Purrington, Joel, Bearden, Rick, Weatherly, Jennifer, White, Danielle, Russell, Jamie, Sun, Qihua, Tang, Miao, Li, Xiaohong, Scott, Lindsay, Moresco, Eva Marie Y., McInerney, Gerald M., Hedestam, Gunilla B. Karlsson, Xie, Yang, Beutler, Bruce

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Examination of ancestry and ethnic affiliation using highly informative diallelic DNA markers : application to diverse and admixed populations and implications for clinical epidemi... by NAN YANG, HONGZHE LI, SELDIN, Michael F, CRISWELL, Lindsey A, GREGERSEN, Peter K, ALARCON-RIQUELME, Marta E, KITTLES, Rick, SHIGETA, Russell, SILVA, Gabriel, PATEL, Pragna I, BELMONT, John W

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Efficacy of apheresis platelets treated with riboflavin and ultraviolet light for pathogen reduction by AuBuchon, James P., Herschel, Louise, Roger, Jill, Taylor, Harry, Whitley, Pamela, Li, Junzhi, Edrich, Rick, Goodrich, Raymond P.

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Renal Expression of the C3a Receptor and Functional Responses of Primary Human Proximal Tubular Epithelial Cells by Braun, Michael C, Reins, Rose Y, Li, Tong-bin, Hollmann, Travis J, Dutta, Ranjan, Rick, Wetsel A, Teng, Ba-Bie, Ke, Baozhen

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Exurbia from the bottom-up: Confronting empirical challenges to characterizing a complex system by Brown, Daniel G., Robinson, Derek T., An, Li, Nassauer, Joan I., Zellner, Moira, Rand, William, Riolo, Rick, Page, Scott E., Low, Bobbi, Wang, Zhifang

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