The PRIDE database and related tools and resources in 2019: improving support for quantification data by Perez-Riverol, Yasset, Csordas, Attila, Bai, Jingwen, Bernal-Llinares, Manuel, Hewapathirana, Suresh, Kundu, Deepti J, Inuganti, Avinash, Griss, Johannes, Mayer, Gerhard, Eisenacher, Martin, Pérez, Enrique, Uszkoreit, Julian, Pfeuffer, Julianus, Sachsenberg, Timo, Yılmaz, Şule, Tiwary, Shivani, Cox, Jürgen, Audain, Enrique, Walzer, Mathias, Jarnuczak, Andrew F, Ternent, Tobias, Brazma, Alvis, Vizcaíno, Juan Antonio

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A decoupled, modular and scriptable architecture for tools to curate data platforms by Langenstein, Momo, Hermjakob, Henning, Bernal Llinares, Manuel

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The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition by Deutsch, Eric W, Csordas, Attila, Sun, Zhi, Jarnuczak, Andrew, Perez-Riverol, Yasset, Ternent, Tobias, Campbell, David S, Bernal-Llinares, Manuel, Okuda, Shujiro, Kawano, Shin, Moritz, Robert L, Carver, Jeremy J, Wang, Mingxun, Ishihama, Yasushi, Bandeira, Nuno, Hermjakob, Henning, Vizcaíno, Juan Antonio

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Identifiers.org: Compact Identifier services in the cloud by Bernal-Llinares, Manuel, Ferrer-Gómez, Javier, Juty, Nick, Goble, Carole, Wimalaratne, Sarala M, Hermjakob, Henning

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Contextual Hub Analysis Tool (CHAT): A Cytoscape app for identifying contextually relevant hubs in biological networks by Muetze, Tanja, Goenawan, Ivan H., Wiencko, Heather L., Bernal-Llinares, Manuel, Bryan, Kenneth, Lynn, David J.

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The next-generation Open Targets Platform: reimagined, redesigned, rebuilt by Ochoa, David, Hercules, Andrew, Carmona, Miguel, Suveges, Daniel, Baker, Jarrod, Malangone, Cinzia, Lopez, Irene, Miranda, Alfredo, Cruz-Castillo, Carlos, Fumis, Luca, Bernal-Llinares, Manuel, Tsukanov, Kirill, Cornu, Helena, Tsirigos, Konstantinos, Razuvayevskaya, Olesya, Buniello, Annalisa, Schwartzentruber, Jeremy, Karim, Mohd, Ariano, Bruno, Martinez Osorio, Ricardo Esteban, Ferrer, Javier, Ge, Xiangyu, Machlitt-Northen, Sandra, Gonzalez-Uriarte, Asier, Saha, Shyamasree, Tirunagari, Santosh, Mehta, Chintan, Roldán-Romero, Juan María, Horswell, Stuart, Young, Sarah, Ghoussaini, Maya, Hulcoop, David G, Dunham, Ian, McDonagh, Ellen M

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Extensive rewiring of the EGFR network in colorectal cancer cells expressing transforming levels of KRASG13D by Kennedy, Susan A., Jarboui, Mohamed-Ali, Srihari, Sriganesh, Raso, Cinzia, Bryan, Kenneth, Dernayka, Layal, Charitou, Theodosia, Bernal-Llinares, Manuel, Herrera-Montavez, Carlos, Krstic, Aleksandar, Matallanas, David, Kotlyar, Max, Jurisica, Igor, Curak, Jasna, Wong, Victoria, Stagljar, Igor, LeBihan, Thierry, Imrie, Lisa, Pillai, Priyanka, Lynn, Miriam A., Fasterius, Erik, Al-Khalili Szigyarto, Cristina, Breen, James, Kiel, Christina, Serrano, Luis, Rauch, Nora, Rukhlenko, Oleksii, Kholodenko, Boris N., Iglesias-Martinez, Luis F., Ryan, Colm J., Pilkington, Ruth, Cammareri, Patrizia, Sansom, Owen, Shave, Steven, Auer, Manfred, Horn, Nicola, Klose, Franziska, Ueffing, Marius, Boldt, Karsten, Lynn, David J., Kolch, Walter

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HiQuant: Rapid Postquantification Analysis of Large-Scale MS-Generated Proteomics Data by Bryan, Kenneth, Jarboui, Mohamed-Ali, Raso, Cinzia, Bernal-Llinares, Manuel, McCann, Brendan, Rauch, Jens, Boldt, Karsten, Lynn, David J

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Open Targets Platform: facilitating therapeutic hypotheses building in drug discovery by Buniello, Annalisa, Suveges, Daniel, Cruz-Castillo, Carlos, Llinares, Manuel Bernal, Cornu, Helena, Lopez, Irene, Tsukanov, Kirill, Roldán-Romero, Juan María, Mehta, Chintan, Fumis, Luca, McNeill, Graham, Hayhurst, James D, Martinez Osorio, Ricardo Esteban, Barkhordari, Ehsan, Ferrer, Javier, Carmona, Miguel, Uniyal, Prashant, Falaguera, Maria J, Rusina, Polina, Smit, Ines, Schwartzentruber, Jeremy, Alegbe, Tobi, Ho, Vivien W, Considine, Daniel, Ge, Xiangyu, Szyszkowski, Szymon, Tsepilov, Yakov, Ghoussaini, Maya, Dunham, Ian, Hulcoop, David G, McDonagh, Ellen M, Ochoa, David

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Contextual Hub Analysis Tool (CHAT): A Cytoscape app for identifying contextually relevant hubs in biological networks by Muetze, Tanja, Goenawan, Ivan H, Wiencko, Heather L, Bernal-Llinares, Manuel, Bryan, Kenneth, Lynn, David J

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Extensive rewiring of the EGFR network in colorectal cancer cells expressing transforming levels of KRAS G13D by Kennedy, Susan A, Jarboui, Mohamed-Ali, Srihari, Sriganesh, Raso, Cinzia, Bryan, Kenneth, Dernayka, Layal, Charitou, Theodosia, Bernal-Llinares, Manuel, Herrera-Montavez, Carlos, Krstic, Aleksandar, Matallanas, David, Kotlyar, Max, Jurisica, Igor, Curak, Jasna, Wong, Victoria, Stagljar, Igor, LeBihan, Thierry, Imrie, Lisa, Pillai, Priyanka, Lynn, Miriam A, Fasterius, Erik, Al-Khalili Szigyarto, Cristina, Breen, James, Kiel, Christina, Serrano, Luis, Rauch, Nora, Rukhlenko, Oleksii, Kholodenko, Boris N, Iglesias-Martinez, Luis F, Ryan, Colm J, Pilkington, Ruth, Cammareri, Patrizia, Sansom, Owen, Shave, Steven, Auer, Manfred, Horn, Nicola, Klose, Franziska, Ueffing, Marius, Boldt, Karsten, Lynn, David J, Kolch, Walter

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A Method for Web Services Fault Tolerance Based on Ripple Effect Analysis by Liu, Lei, Yang, Dong, Llinares, Manuel Bernal

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Épico project. Development of educational recommendations using the DELPHI technique on invasive candidiasis in non-neutropenic critically ill adult patients by Zaragoza, Rafael, Llinares, Pedro, Maseda, Emilio, Ferrer, Ricard, Rodríguez, Alejandro

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EPICO 2.0 project. Development of educational therapeutic recommendations using the DELPHI technique on invasive candidiasis in critically ill adult patients in special situations by Zaragoza, Rafael, Ferrer, Ricard, Maseda, Emilio, Llinares, Pedro, Rodriguez, Alejandro

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