On the causes of gene-body methylation variation in Arabidopsis thaliana by Pisupati, Rahul, Nizhynska, Viktoria, Mollá Morales, Almudena, Nordborg, Magnus

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The Aquilegia genome provides insight into adaptive radiation and reveals an extraordinarily polymorphic chromosome with a unique history by Filiault, Danièle L, Ballerini, Evangeline S, Mandáková, Terezie, Aköz, Gökçe, Derieg, Nathan J, Schmutz, Jeremy, Jenkins, Jerry, Grimwood, Jane, Shu, Shengqiang, Hayes, Richard D, Hellsten, Uffe, Barry, Kerrie, Yan, Juying, Mihaltcheva, Sirma, Karafiátová, Miroslava, Nizhynska, Viktoria, Kramer, Elena M, Lysak, Martin A, Hodges, Scott A, Nordborg, Magnus

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Conditional GWAS of non-CG transposon methylation in Arabidopsis thaliana reveals major polymorphisms in five genes by Sasaki, Eriko, Gunis, Joanna, Reichardt-Gomez, Ilka, Nizhynska, Viktoria, Nordborg, Magnus

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Locally adaptive temperature response of vegetative growth in Arabidopsis thaliana by Clauw, Pieter, Kerdaffrec, Envel, Gunis, Joanna, Reichardt-Gomez, Ilka, Nizhynska, Viktoria, Koemeda, Stefanie, Jez, Jakub, Nordborg, Magnus

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Multiple alleles at a single locus control seed dormancy in Swedish Arabidopsis by Kerdaffrec, Envel, Filiault, Danièle L, Korte, Arthur, Sasaki, Eriko, Nizhynska, Viktoria, Seren, Ümit, Nordborg, Magnus

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Somatic mutation rates scale with time not growth rate in long-lived tropical trees by Satake, Akiko, Imai, Ryosuke, Fujino, Takeshi, Tomimoto, Sou, Ohta, Kayoko, Na'iem, Mohammad, Indrioko, Sapto, Widiyatno, Widiyatno, Purnomo, Susilo, Morales, Almudena Molla, Nizhynska, Viktoria, Tani, Naoki, Suyama, Yoshihisa, Sasaki, Eriko, Kasahara, Masahiro

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Epistatic and allelic interactions control expression of ribosomal RNA gene clusters in Arabidopsis thaliana by Rabanal, Fernando A, Mandáková, Terezie, Soto-Jiménez, Luz M, Greenhalgh, Robert, Parrott, David L, Lutzmayer, Stefan, Steffen, Joshua G, Nizhynska, Viktoria, Mott, Richard, Lysak, Martin A, Clark, Richard M, Nordborg, Magnus

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Unstable Inheritance of 45S rRNA Genes in Arabidopsis thaliana by Rabanal, Fernando A, Nizhynska, Viktoria, Mandáková, Terezie, Novikova, Polina Yu, Lysak, Martin A, Mott, Richard, Nordborg, Magnus

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TE-Locate: A Tool to Locate and Group Transposable Element Occurrences Using Paired-End Next-Generation Sequencing Data by Platzer, Alexander, Nizhynska, Viktoria, Long, Quan

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PoolHap: inferring haplotype frequencies from pooled samples by next generation sequencing by Long, Quan, Jeffares, Daniel C, Zhang, Qingrun, Ye, Kai, Nizhynska, Viktoria, Ning, Zemin, Tyler-Smith, Chris, Nordborg, Magnus

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Germline replications and somatic mutation accumulation are independent of vegetative life span in Arabidopsis by Watson, J. Matthew, Platzer, Alexander, Kazda, Anita, Akimcheva, Svetlana, Valuchova, Sona, Nizhynska, Viktoria, Nordborg, Magnus, Riha, Karel

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Population-level annotation of lncRNAs in Arabidopsis reveals extensive expression variation associated with transposable element–like silencing by Kornienko, Aleksandra E, Nizhynska, Viktoria, Molla Morales, Almudena, Pisupati, Rahul, Nordborg, Magnus

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1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana by Alonso-Blanco, Carlos, Andrade, Jorge, Becker, Claude, Bemm, Felix, Bergelson, Joy, Borgwardt, Karsten M., Cao, Jun, Chae, Eunyoung, Dezwaan, Todd M., Ding, Wei, Ecker, Joseph R., Exposito-Alonso, Moises, Farlow, Ashley, Fitz, Joffrey, Gan, Xiangchao, Grimm, Dominik G., Hancock, Angela M., Henz, Stefan R., Holm, Svante, Horton, Matthew, Jarsulic, Mike, Kerstetter, Randall A., Korte, Arthur, Korte, Pamela, Lanz, Christa, Lee, Cheng-Ruei, Meng, Dazhe, Michael, Todd P., Mott, Richard, Muliyati, Ni Wayan, Nägele, Thomas, Nagler, Matthias, Nizhynska, Viktoria, Nordborg, Magnus, Novikova, Polina Yu, Picó, F. Xavier, Platzer, Alexander, Rabanal, Fernando A., Rodriguez, Alex, Rowan, Beth A., Salomé, Patrice A., Schmid, Karl J., Schmitz, Robert J., Seren, Ümit, Sperone, Felice Gianluca, Sudkamp, Mitchell, Svardal, Hannes, Tanzer, Matt M., Todd, Donald, Volchenboum, Samuel L., Wang, Congmao, Wang, George, Wang, Xi, Weckwerth, Wolfram, Weigel, Detlef, Zhou, Xuefeng

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Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions by Kawakatsu, Taiji, Huang, Shao-shan Carol, Jupe, Florian, Sasaki, Eriko, Schmitz, Robert J., Urich, Mark A., Castanon, Rosa, Nery, Joseph R., Barragan, Cesar, He, Yupeng, Chen, Huaming, Dubin, Manu, Lee, Cheng-Ruei, Wang, Congmao, Bemm, Felix, Becker, Claude, O’Neil, Ryan, O’Malley, Ronan C., Quarless, Danjuma X., Alonso-Blanco, Carlos, Andrade, Jorge, Becker, Claude, Bemm, Felix, Bergelson, Joy, Borgwardt, Karsten, Chae, Eunyoung, Dezwaan, Todd, Ding, Wei, Ecker, Joseph R., Expósito-Alonso, Moisés, Farlow, Ashley, Fitz, Joffrey, Gan, Xiangchao, Grimm, Dominik G., Hancock, Angela, Henz, Stefan R., Holm, Svante, Horton, Matthew, Jarsulic, Mike, Kerstetter, Randall A., Korte, Arthur, Korte, Pamela, Lanz, Christa, Lee, Chen-Ruei, Meng, Dazhe, Michael, Todd P., Mott, Richard, Muliyati, Ni Wayan, Nägele, Thomas, Nagler, Matthias, Nizhynska, Viktoria, Nordborg, Magnus, Novikova, Polina, Picó, F. Xavier, Platzer, Alexander, Rabanal, Fernando A., Rodriguez, Alex, Rowan, Beth A., Salomé, Patrice A., Schmid, Karl, Schmitz, Robert J., Seren, Ümit, Sperone, Felice Gianluca, Sudkamp, Mitchell, Svardal, Hannes, Tanzer, Matt M., Todd, Donald, Volchenboum, Samuel L., Wang, Congmao, Wang, George, Wang, Xi, Weckwerth, Wolfram, Weigel, Detlef, Zhou, Xuefeng, Schork, Nicholas J., Weigel, Detlef, Nordborg, Magnus, Ecker, Joseph R.

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Genome Sequencing Reveals the Origin of the Allotetraploid Arabidopsis suecica by Novikova, Polina Yu, Tsuchimatsu, Takashi, Simon, Samson, Nizhynska, Viktoria, Voronin, Viktor, Burns, Robin, Fedorenko, Olga M, Holm, Svante, Säll, Torbjörn, Prat, Elisa, Marande, William, Castric, Vincent, Nordborg, Magnus

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Cell cycle status of male and female gametes during Arabidopsis reproduction by Voichek, Yoav, Hurieva, Bohdana, Michaud, Caroline, Schmücker, Anna, Vergara, Zaida, Desvoyes, Bénédicte, Gutierrez, Crisanto, Nizhynska, Viktoria, Jaegle, Benjamin, Borg, Michael, Berger, Frédéric, Nordborg, Magnus, Ingouff, Mathieu

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Somatic mutation rates scale with time not growth rate in long-lived tropical trees by Satake, Akiko, Imai, Ryosuke, Fujino, Takeshi, Tomimoto, Sou, Ohta, Kayoko, Na'iem, Mohammad, Indrioko, Sapto, Widiyatno, Widiyatno, Purnomo, Susilo, Morales, Almudena Molla, Nizhynska, Viktoria, Tani, Naoki, Suyama, Yoshihisa, Sasaki, Eriko, Kasahara, Masahiro

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Unorthodox mRNA start site to extend the highly structured leader of retrotransposon Tto1 mRNA increases transposition rate by Böhmdorfer, Gudrun, Hofacker, Ivo L, Garber, Karin, Jelenic, Srecko, Nizhynska, Viktoria, Hirochika, Hirohiko, Stadler, Peter F, Bachmair, Andreas

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Verification of Arabidopsis stock collections using SNPmatch, a tool for genotyping high-plexed samples by Pisupati, Rahul, Reichardt, Ilka, Seren, Ümit, Korte, Pamela, Nizhynska, Viktoria, Kerdaffrec, Envel, Uzunova, Kristina, Rabanal, Fernando A., Filiault, Daniele L., Nordborg, Magnus

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Phosphoinositide 3‐kinase acts through RAC and Cdc42 during agrin‐induced acetylcholine receptor clustering by Nizhynska, Viktoria, Neumueller, Ralph, Herbst, Ruth

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