Search Results - Oğuzhan Külekci, M

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  1. 1
    The order-preserving pattern matching problem in practice

    The order-preserving pattern matching problem in practice by Cantone, Domenico, Faro, Simone, Külekci, M. Oğuzhan

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  2. 2
    A Survey on Shortest Unique Substring Queries

    A Survey on Shortest Unique Substring Queries by Abedin, Paniz, Külekci, M., Thankachan, Shama

    Published in Algorithms
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  3. 3
    Fast and flexible packed string matching

    Fast and flexible packed string matching by Faro, Simone, Külekci, M. Oğuzhan

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  4. 4
    On scrambling the Burrows–Wheeler transform to provide privacy in lossless compression

    On scrambling the Burrows–Wheeler transform to provide privacy in lossless compression by Oğuzhan Külekci, M.

    Published in Computers & security
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  5. 5
    I/O-efficient data structures for non-overlapping indexing

    I/O-efficient data structures for non-overlapping indexing by Hooshmand, Sahar, Abedin, Paniz, Oğuzhan Külekci, M., Thankachan, Sharma V.

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  6. 6
    BLIM: A New Bit-Parallel Pattern Matching Algorithm Overcoming Computer Word Size Limitation

    BLIM: A New Bit-Parallel Pattern Matching Algorithm Overcoming Computer Word Size Limitation by Külekci, M. Oğuzhan

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  7. 7
    Engineering order‐preserving pattern matching with SIMD parallelism

    Engineering order‐preserving pattern matching with SIMD parallelism by Chhabra, Tamanna, Faro, Simone, Külekci, M. Oğuzhan, Tarhio, Jorma

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  8. 8
    A simple yet time-optimal and linear-space algorithm for shortest unique substring queries

    A simple yet time-optimal and linear-space algorithm for shortest unique substring queries by İleri, Atalay Mert, Külekci, M. Oğuzhan, Xu, Bojian

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  9. 9
    Range selection and predecessor queries in data aware space and time

    Range selection and predecessor queries in data aware space and time by Külekci, M. Oğuzhan, Thankachan, Sharma V.

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  10. 10
    Efficient Maximal Repeat Finding Using the Burrows-Wheeler Transform and Wavelet Tree

    Efficient Maximal Repeat Finding Using the Burrows-Wheeler Transform and Wavelet Tree by Kulekci, M. O., Vitter, J. S., Bojian Xu

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  11. 11
    Ψ-RA: a parallel sparse index for genomic read alignment

    Ψ-RA: a parallel sparse index for genomic read alignment by Oğuzhan Külekci, M, Hon, Wing-Kai, Shah, Rahul, Scott Vitter, Jeffrey, Xu, Bojian

    Published in BMC genomics
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  12. 12
    Fast Pattern-Matching via k-bit Filtering Based Text Decomposition

    Fast Pattern-Matching via k-bit Filtering Based Text Decomposition by Külekci, M. O uzhan, Vitter, Jeffrey Scott, Xu, Bojian

    Published in Computer journal
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  13. 13
    An extended de Bruijn graph for feature engineering over biological sequential data

    An extended de Bruijn graph for feature engineering over biological sequential data by Cakiroglu, Mert Onur, Kurban, Hasan, Sharma, Parichit, Kulekci, M Oguzhan, Buxton, Elham Khorasani, Raeeszadeh-Sarmazdeh, Maryam, Dalkilic, Mehmet M

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  14. 14
    Compressed Context Modeling for Text Compression

    Compressed Context Modeling for Text Compression by Külekci, M Oğuzhan

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    Conference Proceeding
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  15. 15
    Robustness of Massively Parallel Sequencing Platforms

    Robustness of Massively Parallel Sequencing Platforms by Kavak, Pınar, Yüksel, Bayram, Aksu, Soner, Kulekci, M Oguzhan, Güngör, Tunga, Hach, Faraz, Şahinalp, S Cenk, Alkan, Can, Sağıroğlu, Mahmut Şamil

    Published in PloS one
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  16. 16
    GENCROBAT: Efficient transmission and processing of the massive genomic data

    GENCROBAT: Efficient transmission and processing of the massive genomic data by Kulekci, M. Oguzhan, Sagiroglu, M. Gamil

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  17. 17
    An Algorithm for Reordering Buffer Management Problem and Experimental Evaluations on Discrete Distributions

    An Algorithm for Reordering Buffer Management Problem and Experimental Evaluations on Discrete Distributions by Filiz, Gözde, Külekci, M Oğuzhan

    Published in arXiv.org
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  18. 18
    Ψ-RA: a parallel sparse index for genomic read alignment

    Ψ-RA: a parallel sparse index for genomic read alignment by Oğuzhan Külekci, M, Hon, Wing-Kai, Shah, Rahul, Scott Vitter, Jeffrey, Xu, Bojian

    Published in BMC genomics
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  19. 19
    Enumerative Data Compression with Non-Uniquely Decodable Codes

    Enumerative Data Compression with Non-Uniquely Decodable Codes by Külekci, M Oğuzhan, Öztürk, Yasin, Altunok, Elif, Altıniğne, Can

    Published in arXiv.org
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  20. 20
    Tara: An algorithm for fast searching of multiple patterns on text files

    Tara: An algorithm for fast searching of multiple patterns on text files by Kulekci, M. Oguzhan

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