Deep sequencing of norovirus genomes defines evolutionary patterns in an urban tropical setting by Cotten, Matthew, Petrova, Velislava, Phan, My V T, Rabaa, Maia A, Watson, Simon J, Ong, Swee Hoe, Kellam, Paul, Baker, Stephen

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Mutational signature dynamics indicate SARS-CoV-2's evolutionary capacity is driven by host antiviral molecules by Lamb, Kieran D, Luka, Martha M, Saathoff, Megan, Orton, Richard J, Phan, My V T, Cotten, Matthew, Yuan, Ke, Robertson, David L

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Establishing farm dust as a useful viral metagenomic surveillance matrix by Kwok, Kirsty T. T., de Rooij, Myrna M. T., Messink, Aniek B., Wouters, Inge M., Smit, Lidwien A. M., Cotten, Matthew, Heederik, Dick J. J., Koopmans, Marion P. G., Phan, My V. T.

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Identification of missed viruses by metagenomic sequencing of clinical respiratory samples from Kenya by Phan, My V. T., Agoti, Charles N., Munywoki, Patrick K., Otieno, Grieven P., Ngama, Mwanajuma, Kellam, Paul, Cotten, Matthew, Nokes, D. James

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Whole genome sequencing and phylogenetic analysis of human metapneumovirus strains from Kenya and Zambia by Kamau, Everlyn, Oketch, John W, de Laurent, Zaydah R, Phan, My V T, Agoti, Charles N, Nokes, D James, Cotten, Matthew

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Evaluating and modeling rate sensitivity in advanced reactor structural materials: 316H, Gr. 91, and A617 by Messner, M.C., Phan, V.-T., Sham, T.-L.

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Virus Metagenomics in Farm Animals: A Systematic Review by Kwok, Kirsty T T, Nieuwenhuijse, David F, Phan, My V T, Koopmans, Marion P G

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Whole-Genome Next-Generation Sequencing to Study Within-Host Evolution of Norovirus (NoV) Among Immunocompromised Patients With Chronic NoV Infection by van Beek, Janko, de Graaf, Miranda, Smits, Saskia, Schapendonk, Claudia M. E., Verjans, Georges M. G. M., Vennema, Harry, van der Eijk, Annemiek A., Phan, V. T., Cotten, Matthew, Koopmans, Marion

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Virus genomes reveal factors that spread and sustained the Ebola epidemic by Dudas, Gytis, Carvalho, Luiz Max, Bedford, Trevor, Tatem, Andrew J., Baele, Guy, Faria, Nuno R., Park, Daniel J., Ladner, Jason T., Arias, Armando, Asogun, Danny, Bielejec, Filip, Caddy, Sarah L., Cotten, Matthew, D’Ambrozio, Jonathan, Dellicour, Simon, Di Caro, Antonino, Diclaro, Joseph W., Duraffour, Sophie, Elmore, Michael J., Fakoli, Lawrence S., Faye, Ousmane, Gilbert, Merle L., Gevao, Sahr M., Gire, Stephen, Gladden-Young, Adrianne, Gnirke, Andreas, Goba, Augustine, Grant, Donald S., Haagmans, Bart L., Hiscox, Julian A., Jah, Umaru, Kugelman, Jeffrey R., Liu, Di, Lu, Jia, Malboeuf, Christine M., Mate, Suzanne, Matthews, David A., Matranga, Christian B., Meredith, Luke W., Qu, James, Quick, Joshua, Pas, Suzan D., Phan, My V. T., Pollakis, Georgios, Reusken, Chantal B., Sanchez-Lockhart, Mariano, Schaffner, Stephen F., Schieffelin, John S., Sealfon, Rachel S., Simon-Loriere, Etienne, Smits, Saskia L., Stoecker, Kilian, Thorne, Lucy, Tobin, Ekaete Alice, Vandi, Mohamed A., Watson, Simon J., West, Kendra, Whitmer, Shannon, Wiley, Michael R., Winnicki, Sarah M., Wohl, Shirlee, Wölfel, Roman, Yozwiak, Nathan L., Andersen, Kristian G., Blyden, Sylvia O., Bolay, Fatorma, Carroll, Miles W., Dahn, Bernice, Diallo, Boubacar, Formenty, Pierre, Fraser, Christophe, Gao, George F., Garry, Robert F., Goodfellow, Ian, Günther, Stephan, Happi, Christian T., Holmes, Edward C., Kargbo, Brima, Keïta, Sakoba, Kellam, Paul, Koopmans, Marion P. G., Kuhn, Jens H., Loman, Nicholas J., Magassouba, N’Faly, Naidoo, Dhamari, Nichol, Stuart T., Nyenswah, Tolbert, Palacios, Gustavo, Pybus, Oliver G., Sabeti, Pardis C., Sall, Amadou, Ströher, Ute, Wurie, Isatta, Suchard, Marc A., Lemey, Philippe, Rambaut, Andrew

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Alternate primers for whole-genome SARS-CoV-2 sequencing by Cotten, Matthew, Lule Bugembe, Dan, Kaleebu, Pontiano, V.T. Phan, My

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Unbiased whole-genome deep sequencing of human and porcine stool samples reveals circulation of multiple groups of rotaviruses and a putative zoonotic infection by Phan, My V T, Anh, Pham Hong, Cuong, Nguyen Van, Munnink, Bas B Oude, van der Hoek, Lia, My, Phuc Tran, Tri, Tue Ngo, Bryant, Juliet E, Baker, Stephen, Thwaites, Guy, Woolhouse, Mark, Kellam, Paul, Rabaa, Maia A, Cotten, Matthew

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Metavirome Sequencing to Evaluate Norovirus Diversity in Sewage and Related Bioaccumulated Oysters by Strubbia, Sofia, Schaeffer, Julien, Oude Munnink, Bas B., Besnard, Alban, Phan, My V. T., Nieuwenhuijse, David F., de Graaf, Miranda, Schapendonk, Claudia M. E., Wacrenier, Candice, Cotten, Matthew, Koopmans, Marion P. G., Le Guyader, Françoise S.

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Correction to: Whole genome sequencing and phylogenetic analysis of human metapneumovirus strains from Kenya and Zambia by Kamau, Everlyn, Oketch, John W, de Laurent, Zaydah R, Phan, My V T, Agoti, Charles N, Nokes, D James, Cotten, Matthew

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Finfish marine aquaculture in northern Vietnam: Factors related to pathogen introduction and spread by Boerlage, A.S., Nguyen, K.V., Davidson, J., Phan, V.T., Bui, T.N., Dang, L.T., Stryhn, H., Hammell, K.L.

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Spike Protein Cleavage-Activation in the Context of the SARS-CoV-2 P681R Mutation: an Analysis from Its First Appearance in Lineage A.23.1 Identified in Uganda by Lubinski, Bailey, Frazier, Laura E, Phan, My V T, Bugembe, Daniel L, Cunningham, Jessie L, Tang, Tiffany, Daniel, Susan, Cotten, Matthew, Jaimes, Javier A, Whittaker, Gary R

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Environmental profile of the production of fragrance ingredients used in cosmetic products: comparative analysis of results obtained by life cycle assessment and the green chemistr... by Martz, Patricia, Phan, T. V. Tony, L'Haridon, Jacques, Beausoleil, Marie-Hélène, Lafaye, Kévin, Gérand, Yves, Gallardo, Cyril

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Epidemiological features and risk factors of Salmonella gastroenteritis in children resident in Ho Chi Minh City, Vietnam by THOMPSON, C. N., PHAN, V. T. M., LE, T. P. T., PHAM, T. N. T., HOANG, L. P., HA, V., NGUYEN, V. M. H., PHAM, V. M., NGUYEN, T. V., CAO, T. T., TRAN, T. T. N., NGUYEN, T. T. H., DAO, M. T., CAMPBELL, J. I., NGUYEN, T. C., TANG, C. T., HA, M. T., FARRAR, J., BAKER, S.

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Transmission patterns and evolution of respiratory syncytial virus in a community outbreak identified by genomic analysis by Agoti, Charles N., Munywoki, Patrick K., Phan, My V. T., Otieno, James R., Kamau, Everlyn, Bett, Anne, Kombe, Ivy, Githinji, George, Medley, Graham F., Cane, Patricia A., Kellam, Paul, Cotten, Matthew, Nokes, D. James

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Microcalorimetry: A Novel Application to Measure In Vitro Phage Susceptibility of Staphylococcus aureus in Human Serum by Molendijk, Michèle M, Phan, My V T, Bode, Lonneke G M, Strepis, Nikolas, Prasad, Divyae K, Worp, Nathalie, Nieuwenhuijse, David F, Schapendonk, Claudia M E, Boekema, Bouke K H L, Verbon, Annelies, Koopmans, Marion P G, Graaf, Miranda de, van Wamel, Willem J B

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The Utility of Data Transformation for Alignment, De Novo Assembly and Classification of Short Read Virus Sequences by Tapinos, Avraam, Constantinides, Bede, Phan, My V T, Kouchaki, Samaneh, Cotten, Matthew, Robertson, David L

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