A statistical model of ChIA-PET data for accurate detection of chromatin 3D interactions by Paulsen, Jonas, Rødland, Einar A, Holden, Lars, Holden, Marit, Hovig, Eivind

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Interplay of choline metabolites and genes in patient-derived breast cancer xenografts by Grinde, Maria T, Skrbo, Nirma, Moestue, Siver A, Rødland, Einar A, Borgan, Eldrid, Kristian, Alexandr, Sitter, Beathe, Bathen, Tone F, Børresen-Dale, Anne-Lise, Mælandsmo, Gunhild M, Engebraaten, Olav, Sørlie, Therese, Marangoni, Elisabetta, Gribbestad, Ingrid S

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Large-scale inference of the point mutational spectrum in human segmental duplications by Nakken, Sigve, Rødland, Einar A, Rognes, Torbjørn, Hovig, Eivind

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Effect of Energy Deposition on High-Voltage Electropulse Drilling Efficiency in Granite by Vazhov, V. F., Zhurkov, M. Yu, Datskevich, S. Yu, Muratov, V. M., Rødland, A.

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Genetic Interactions of DNA Repair Pathways in the Pathogen Neisseria meningitidis by DAVIDSEN, Tonje, TUVEN, Hanne K, BJØRAS, Magnar, RØDLAND, Einar A, TONJUM, Tone

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Biased distribution of DNA uptake sequences towards genome maintenance genes by Davidsen, Tonje, Rødland, Einar A., Lagesen, Karin, Seeberg, Erling, Rognes, Torbjørn, Tønjum, Tone

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A nationwide genomic study of clinical Klebsiella pneumoniae in Norway 2001–15: introduction and spread of ESBLs facilitated by clonal groups CG15 and CG307 by Fostervold, Aasmund, Hetland, Marit A K, Bakksjø, Ragna, Bernhoff, Eva, Holt, Kathryn E, Samuelsen, Ørjan, Simonsen, Gunnar Skov, Sundsfjord, Arnfinn, Wyres, Kelly L, Löhr, Iren Høyland

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Compact representation of k-mer de Bruijn graphs for genome read assembly by Radland, Einar Andreas

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Implementing precision cancer medicine in the public health services of Norway: the diagnostic infrastructure and a cost estimate by Ree, Anne Hansen, Russnes, Hege G, Heinrich, Daniel, Dueland, Svein, Boye, Kjetil, Nygaard, Vigdis, Silwal-Pandit, Laxmi, Østrup, Olga, Hovig, Eivind, Nygaard, Vegard, Rødland, Einar A, Nakken, Sigve, Øien, Janne T, Johansen, Christin, Bergheim, Inger R, Skarpeteig, Veronica, Sathermugathevan, Menaka, Sauer, Torill, Lund-Iversen, Marius, Beiske, Klaus, Nasser, Salah, Julsrud, Lars, Reisse, Claudius H, Ruud, Espen A, Flørenes, Vivi Ann, Hagene, Kirsten T, Aas, Eline, Lurås, Hilde, Johnsen-Soriano, Siv, Geitvik, Gry A, Lingjærde, Ole Christian, Børresen-Dale, Anne-Lise, Mælandsmo, Gunhild M, Flatmark, Kjersti

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Characterization of the major formamidopyrimidine-DNA glycosylase homolog in Mycobacterium tuberculosis and its linkage to variable tandem repeats by Olsen, Ingrid, Balasingham, Seetha V, Davidsen, Tonje, Debebe, Ephrem, Rødland, Einar A, van Soolingen, Dick, Kremer, Kristin, Alseth, Ingrun, Tønjum, Tone

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Molecular subtyping for clinically defined breast cancer subgroups by Zhao, Xi, Rødland, Einar Andreas, Tibshirani, Robert, Plevritis, Sylvia

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Abstract 1752: Immune-related gene signatures in colorectal liver metastases: Exposing an opportunity for immune modulating therapy by Nygaard, Vigdis, Dagenborg, Vegar J., Østrup, Olga, Rødland, Einar A., Skarpeteig, Veronica, Silwal-Pandit, Laxmi, Grzyb, Krzysztof, Berstad, Audun E., Fretland, Åsmund A., Mælandsmo, Gunhild M., Børresen-Dale, Anne-Lise, Ree, Anne H., Edwin, Bjørn, Flatmark, Kjersti

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Proteogenomic Landscape of Breast Cancer Tumorigenesis and Targeted Therapy by Krug, Karsten, Jaehnig, Eric J., Satpathy, Shankha, Blumenberg, Lili, Karpova, Alla, Anurag, Meenakshi, Miles, George, Mertins, Philipp, Geffen, Yifat, Tang, Lauren C., Heiman, David I., Cao, Song, Maruvka, Yosef E., Lei, Jonathan T., Huang, Chen, Kothadia, Ramani B., Colaprico, Antonio, Birger, Chet, Wang, Jarey, Dou, Yongchao, Wen, Bo, Shi, Zhiao, Liao, Yuxing, Wiznerowicz, Maciej, Wyczalkowski, Matthew A., Chen, Xi Steven, Kennedy, Jacob J., Paulovich, Amanda G., Thiagarajan, Mathangi, Kinsinger, Christopher R., Hiltke, Tara, Boja, Emily S., Mesri, Mehdi, Robles, Ana I., Rodriguez, Henry, Westbrook, Thomas F., Ding, Li, Getz, Gad, Clauser, Karl R., Fenyö, David, Ruggles, Kelly V., Zhang, Bing, Mani, D.R., Carr, Steven A., Ellis, Matthew J., Gillette, Michael A., Avanessian, Shayan C., Cai, Shuang, Chan, Daniel, Chen, Xian, Edwards, Nathan J., Hoofnagle, Andrew N., Kane, M. Harry, Ketchum, Karen A., Kuhn, Eric, Levine, Douglas A., Li, Shunqiang, Liebler, Daniel C., Liu, Tao, Luo, Jingqin, Madhavan, Subha, Maher, Chris, McDermott, Jason E., McGarvey, Peter B., Oberti, Mauricio, Pandey, Akhilesh, Payne, Samuel H., Ransohoff, David F., Rivers, Robert C., Rodland, Karin D., Rudnick, Paul, Sanders, Melinda E., Shaw, Kenna M., Shih, Ie-Ming, Slebos, Robbert J.C., Smith, Richard D., Snyder, Michael, Stein, Stephen E., Tabb, David L., Thangudu, Ratna R., Thomas, Stefani, Wang, Yue, White, Forest M., Whiteaker, Jeffrey R., Whiteley, Gordon A., Zhang, Hui, Zhang, Zhen, Zhao, Yingming, Zhu, Heng, Zimmerman, Lisa J.

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Proteogenomic Characterization Reveals Therapeutic Vulnerabilities in Lung Adenocarcinoma by Satpathy, Shankha, Cao, Song, Dhanasekaran, Saravana M., Vasaikar, Suhas V., Petralia, Francesca, Liang, Wen-Wei, Krek, Azra, Hong, Runyu, Blumenberg, Lili, Wendl, Michael C., Wen, Bo, Tang, Lauren C., MacMullan, Melanie A., Kane, M. Harry, Newton, Chelsea J., Cornwell, MacIntosh, Yoo, Seungyeul, Mannan, Rahul, Vats, Pankaj, Kumar-Sinha, Chandan, Colaprico, Antonio, Geffen, Yifat, Wiznerowicz, Maciej, Gümüş, Zeynep H., Veluswamy, Rajwanth R., Hostetter, Galen, Mesri, Mehdi, Boja, Emily S., Omenn, Gilbert S., Thiagarajan, Mathangi, Getz, Gad, Cieslik, Marcin P., Govindan, Ramaswamy, Wang, Pei, Nesvizhskii, Alexey I., Ding, Li, Mani, D.R., Francis, Alicia, Charamut, Alyssa, Paulovich, Amanda G., Karnuta, Andrii, Hindenach, Barbara, Druker, Brian J., Birger, Chet, Jones, Corbin D., Rohrer, Daniel C., Zhou, Daniel Cui, Chan, Daniel W., Chesla, David, Clark, David J., Tan, Donghui, Duffy, Elizabeth, Bergstrom, Erik J., Wilson, George D., Chen, Hai-Quan, Sun, Hua, Whiteaker, Jeffrey R., Rodland, Karin D., Hoadley, Katherine A., Elburn, Kim, Hannick, Linda, Qi, Liqun, Sokoll, Lori J., Wojtyś, Małgorzata, Domagalski, Marcin J., Beasley, Mary B., Monroe, Matthew E., Ellis, Matthew J., Dyer, Maureen, Burke, Meghan C., Borucki, Melissa, Schnaubelt, Michael, Chaikin, Michelle, Selvan, Myvizhi Esai, McGarvey, Peter B., Thangudu, Ratna R., Smith, Richard D., Welsh, Robert J., Zelt, Robert, Mehra, Rohit, Matteotti, Ronald, Mareedu, Sailaja, Payne, Samuel H., Cottingham, Sandra, Chugh, Seema, Smith, Shaleigh, Tsang, Shirley, Cai, Shuang, Boca, Simina M., Stein, Stephen E., Krubit, Tanya, Skelly, Tara, Bauer, Thomas, Velvulou, Uma, Petyuk, Vladislav A., Bocik, William E., Maggio, William W., Chen, Xi, Wu, Yige, Shi, Zhiao

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Proteogenomic characterization of pancreatic ductal adenocarcinoma by Cao, Liwei, Huang, Chen, Cui Zhou, Daniel, Hu, Yingwei, Savage, Sara R., Krug, Karsten, Schnaubelt, Michael, Eguez, Rodrigo Vargas, Yang, Weiming, Pan, Jianbo, Wen, Bo, Jiang, Wen, Liao, Yuxing, Terekhanova, Nadezhda V., Cao, Song, Lu, Rita Jui-Hsien, Liu, Ruiyang, Zhu, Houxiang, Wu, Yige, Easwaran, Hariharan, Yoo, Seungyeul, Liu, Wenke, Haibe-Kains, Benjamin, Thiagarajan, Mathangi, Jewell, Scott D., Hostetter, Galen, Li, Qing Kay, Fenyö, David, Wang, Pei, Mani, D.R., Omenn, Gilbert S., Boja, Emily S., Mesri, Mehdi, Robles, Ana I., Rodriguez, Henry, Chan, Daniel W., Hruban, Ralph H., Ding, Li, Zhang, Hui, Amin, Mitual, An, Eunkyung, Bauer, Thomas, Birger, Chet, Birrer, Michael J., Bocik, William, Borucki, Melissa, Carr, Steven A., Cerda, Sandra, Chen, Huan, Chen, Steven, Chesla, David, Chinnaiyan, Arul M., Colaprico, Antonio, Cottingham, Sandra, Derejska, Magdalena, Dhanasekaran, Saravana M., Domagalski, Marcin J., Edwards, Nathan J., Francis, Alicia, Francis, Jesse, Gabriel, Stacey, Gabrovski, Nikolay, Gardner, Johanna, Getz, Gad, Goldthwaite, Charles A., Grady, Pamela, Guo, Shuai, Hariharan, Pushpa, Hindenach, Barbara, Hoadley, Katherine A., Jones, Corbin D., Ketchum, Karen A., Kinsinger, Christopher R., Kusnierz, Katarzyna, Mallery, David, Matteotti, Ronald, McGarvey, Peter B., Minoo, Parham, Paklina, Oxana V., Paulovich, Amanda G., Payne, Samuel H., Potapova, Olga, Qi, Liqun, Roche, Nancy, Rodland, Karin D., Rohrer, Daniel C., Shabunin, Alexey V., Shelton, Troy, Shutack, Yvonne, Singh, Shilpi, Smith, Michael, Smith, Richard D., Sokoll, Lori J., Suh, James, Thangudu, Ratna R., Valley, Dana R., Wang, Wenyi, Wilson, George D., Wiznerowicz, Maciej, Zhang, Zhen

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Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma by Pan, Jianbo, Hu, Yingwei, Krek, Azra, Li, Yize, Chen, Lin S., Vasaikar, Suhas, Wu, Yige, Chowdhury, Shrabanti, Wyczalkowski, Matthew A., Kong, Andy, Sethuraman, Sunantha, Avtonomov, Dmitry M., Colaprico, Antonio, Cao, Song, Cho, Kyung-Cho, Kalayci, Selim, Ma, Shiyong, Ruggles, Kelly, Kawaler, Emily, Wen, Bo, Chen, Feng, Edwards, Nathan, Pierorazio, Phillip M., Pavlovich, Christian P., Brominski, Gabriel, Hsieh, James J., Lubinski, Jan, Wiznerowicz, Maciej, Kinsinger, Christopher R., Thiagarajan, Mathangi, Mesri, Mehdi, Hiltke, Tara, Ding, Li, Zhang, Zhen, Omenn, Gilbert S., Cieslik, Marcin, Nesvizhskii, Alexey I., Zhang, Hui, Hashimi, Abdul Samad, Charamut, Alyssa, Druker, Brian J., Tognon, Cristina, Mani, D.R., Rohrer, Daniel C., Tansil, Darlene, Chesla, David, Heiman, David, Wheeler, David, Chan, Doug, Demir, Emek, Wilson, George D., Liu, Hongwei, Zhou, Hua, Day, Jacob, Suh, James, Whiteaker, Jeffrey R., Eschbacher, Jennifer, Chen, Jin, Ketchum, Karen A., Rodland, Karin D., Krug, Karsten, Holloway, Kimberly, Sokoll, Lori J., Cornwell, MacIntosh, Loriaux, Marc, Anderson, Matthew, Ellis, Matthew J., Dyer, Maureen, Burke, Meghan C., Borucki, Melissa, Gillette, Michael A., Birrer, Michael J., Smith, Michael, Khan, Munziba, Roche, Nancy, Edwards, Nathan J., Vatanian, Negin, Tignor, Nicole, Piehowski, Paul, McGarvey, Peter B., Hariharan, Pushpa, Gao, Qingsong, Thangudu, Ratna R., Montgomery, Rebecca, Bremner, Ross, Liu, Ruiyang, Hong, Runyu, Payne, Samuel H., Patel, Shalin, Satpathy, Shankha, Davies, Sherri R., Patil, Snehal, Carter, Sonya, Gabriel, Stacey, Thomas, Stefani N., Carr, Steven A., Skelly, Tara, Borate, Uma, Maruvka, Yosef, Li, Zhi

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A proteogenomic portrait of lung squamous cell carcinoma by Satpathy, Shankha, Krug, Karsten, Jean Beltran, Pierre M, Savage, Sara R, Petralia, Francesca, Kumar-Sinha, Chandan, Dou, Yongchao, Reva, Boris, Kane, M Harry, Avanessian, Shayan C, Vasaikar, Suhas V, Krek, Azra, Lei, Jonathan T, Jaehnig, Eric J, Omelchenko, Tatiana, Geffen, Yifat, Bergstrom, Erik J, Stathias, Vasileios, Christianson, Karen E, Heiman, David I, Cieslik, Marcin P, Cao, Song, Song, Xiaoyu, Ji, Jiayi, Liu, Wenke, Li, Kai, Wen, Bo, Li, Yize, Gümüş, Zeynep H, Selvan, Myvizhi Esai, Soundararajan, Rama, Visal, Tanvi H, Raso, Maria G, Parra, Edwin Roger, Babur, Özgün, Vats, Pankaj, Anand, Shankara, Schraink, Tobias, Cornwell, MacIntosh, Rodrigues, Fernanda Martins, Zhu, Houxiang, Mo, Chia-Kuei, Zhang, Yuping, da Veiga Leprevost, Felipe, Huang, Chen, Chinnaiyan, Arul M, Wyczalkowski, Matthew A, Omenn, Gilbert S, Newton, Chelsea J, Schurer, Stephan, Ruggles, Kelly V, Fenyö, David, Jewell, Scott D, Thiagarajan, Mathangi, Mesri, Mehdi, Rodriguez, Henry, Mani, Sendurai A, Udeshi, Namrata D, Getz, Gad, Suh, James, Li, Qing Kay, Hostetter, Galen, Paik, Paul K, Dhanasekaran, Saravana M, Govindan, Ramaswamy, Ding, Li, Robles, Ana I, Clauser, Karl R, Nesvizhskii, Alexey I, Wang, Pei, Carr, Steven A, Zhang, Bing, Mani, D R, Gillette, Michael A

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Proteogenomics connects somatic mutations to signalling in breast cancer by Mertins, Philipp, Mani, D. R., Ruggles, Kelly V., Gillette, Michael A., Clauser, Karl R., Wang, Pei, Wang, Xianlong, Qiao, Jana W., Cao, Song, Petralia, Francesca, Kawaler, Emily, Mundt, Filip, Krug, Karsten, Tu, Zhidong, Lei, Jonathan T., Gatza, Michael L., Wilkerson, Matthew, Perou, Charles M., Yellapantula, Venkata, Huang, Kuan-lin, Lin, Chenwei, McLellan, Michael D., Yan, Ping, Davies, Sherri R., Townsend, R. Reid, Skates, Steven J., Wang, Jing, Zhang, Bing, Kinsinger, Christopher R., Mesri, Mehdi, Rodriguez, Henry, Ding, Li, Paulovich, Amanda G., Fenyö, David, Ellis, Matthew J., Carr, Steven A.

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Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer by Zhang, Hui, Zhang, Zhen, Payne, Samuel H., Zhang, Bai, McDermott, Jason E., Zhou, Jian-Ying, Petyuk, Vladislav A., Chen, Li, Ray, Debjit, Sun, Shisheng, Yang, Feng, Chen, Lijun, Wang, Jing, Cha, Seong Won, Aiyetan, Paul, Woo, Sunghee, Tian, Yuan, Gritsenko, Marina A., Clauss, Therese R., Choi, Caitlin, Monroe, Matthew E., Thomas, Stefani, Nie, Song, Wu, Chaochao, Moore, Ronald J., Yu, Kun-Hsing, Tabb, David L., Fenyö, David, Bafna, Vineet, Wang, Yue, Rodriguez, Henry, Boja, Emily S., Hiltke, Tara, Rivers, Robert C., Sokoll, Lori, Zhu, Heng, Shih, Ie-Ming, Cope, Leslie, Pandey, Akhilesh, Zhang, Bing, Snyder, Michael P., Levine, Douglas A., Smith, Richard D., Chan, Daniel W., Rodland, Karin D., Carr, Steven A., Gillette, Michael A., Klauser, Karl R., Kuhn, Eric, Mani, D.R., Ketchum, Karen A., Thangudu, Ratna, Cai, Shuang, Oberti, Mauricio, Paulovich, Amanda G., Whiteaker, Jeffrey R., Edwards, Nathan J., McGarvey, Peter B., Madhavan, Subha, Wang, Pei, Chan, Daniel W., Pandey, Akhilesh, Shih, Ie-Ming, Zhang, Hui, Zhang, Zhen, Zhu, Heng, Cope, Leslie, Skates, Steven J., White, Forest M., Levine, Douglas A., Boja, Emily S., Kinsinger, Christopher R., Hiltke, Tara, Mesri, Mehdi, Rivers, Robert C., Rodriguez, Henry, Shaw, Kenna M., Stein, Stephen E., Fenyo, David, Liu, Tao, McDermott, Jason E., Payne, Samuel H., Rodland, Karin D., Smith, Richard D., Rudnick, Paul, Zhao, Yingming, Ransohoff, David F., Hoofnagle, Andrew N., Liebler, Daniel C., Sanders, Melinda E., Shi, Zhiao, Slebos, Robbert J.C., Tabb, David L., Zhang, Bing, Zimmerman, Lisa J., Wang, Yue, Davies, Sherri R., Ding, Li, Ellis, Matthew J.C., Townsend, R. Reid

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Proteogenomic characterization of human colon and rectal cancer by Zhang, Bing, Wang, Jing, Wang, Xiaojing, Zhu, Jing, Liu, Qi, Shi, Zhiao, Chambers, Matthew C., Zimmerman, Lisa J., Shaddox, Kent F., Kim, Sangtae, Davies, Sherri R., Wang, Sean, Wang, Pei, Kinsinger, Christopher R., Rivers, Robert C., Rodriguez, Henry, Townsend, R. Reid, Ellis, Matthew J. C., Carr, Steven A., Tabb, David L., Coffey, Robert J., Slebos, Robbert J. C., Liebler, Daniel C.

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