Bamchop: A bioinformatics utility to summarize and visualize exome and other types of targeted resequencing data by Zhe Zhang, Leipzig, J., Sasson, A., Perin, J. C., Xie, M., Sarmady, M., Warren, P., White, P.

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Transcriptome analysis of IL-10-stimulated (M2c) macrophages by next-generation sequencing by Lurier, Emily B, Dalton, Donald, Dampier, Will, Raman, Pichai, Nassiri, Sina, Ferraro, Nicole M, Rajagopalan, Ramakrishan, Sarmady, Mahdi, Spiller, Kara L

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Clinical utility of custom-designed NGS panel testing in pediatric tumors by Surrey, Lea F, MacFarland, Suzanne P, Chang, Fengqi, Cao, Kajia, Rathi, Komal S, Akgumus, Gozde T, Gallo, Daniel, Lin, Fumin, Gleason, Adam, Raman, Pichai, Aplenc, Richard, Bagatell, Rochelle, Minturn, Jane, Mosse, Yael, Santi, Mariarita, Tasian, Sarah K, Waanders, Angela J, Sarmady, Mahdi, Maris, John M, Hunger, Stephen P, Li, Marilyn M

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Integrated Proteogenomic Characterization across Major Histological Types of Pediatric Brain Cancer by Reva, Boris, Chowdhury, Shrabanti, Ji, Jiayi, Whiteaker, Jeffrey R., Colaprico, Antonio, Raman, Pichai, Guo, Yiran, Brown, Miguel A., Ivey, Richard G., Szpyt, John, Guha Thakurta, Sanjukta, Lopez, Gonzalo, Kalayci, Selim, Gümüş, Zeynep H., Yoo, Seungyeul, da Veiga Leprevost, Felipe, Katsnelson, Lizabeth, Wang, Ying, Kennedy, Jacob J., Voytovich, Uliana J., Zhao, Lei, Baubet, Valerie, Tauhid, Lamiya, Lilly, Jena V., Mason, Jennifer L., Farrow, Bailey, Young, Nathan, Leary, Sarah, Moon, Jamie, Petyuk, Vladislav A., Nazarian, Javad, Palmer, James N., Lober, Robert M., Rivero-Hinojosa, Samuel, Wang, Joshua M., Broberg, Matilda, Chu, Rosalie K., Moore, Ronald J., Monroe, Matthew E., Zhao, Rui, Zhu, Jun, Mesri, Mehdi, Boja, Emily, Hiltke, Tara, Rodriguez, Henry, Zhang, Bing, Mani, D.R., Iavarone, Antonio, Schürer, Stephan, Chen, Xi S., Heath, Allison P., Rokita, Jo Lynne, Nesvizhskii, Alexey I., Fenyö, David, Rodland, Karin D., Liu, Tao, Paulovich, Amanda G., Resnick, Adam C., Storm, Phillip B., Rood, Brian R., Wang, Pei, Morgan, Allison M., Waanders, Angela J., Buccoliero, Anna Maria, Leonard, Carina A., Kline, Cassie N., Li, Chunde, Kram, David E., Hanson, Derek, Appert, Elizabeth, Kawaler, Emily A., Raabe, Eric H., Jackson, Eric M., Greenfield, Jeffrey P., Pollack, Ian F., Cain, Jason E., Foster, Jessica B., Palma, July E., Ketchum, Karen A., Blumenberg, Lili, Cornwell, Macintosh, Sarmady, Mahdi, Domagalski, Marcin J., Cieślik, Marcin P., Li, Marilyn M., Wyczalkowski, Matthew A., Connors, Meghan, Gupta, Nalin, Edwards, Nathan J., Vaske, Olena M., Becher, Oren, Firestein, Ron, Mueller, Sabine, Winebrake, Samuel G., Dhanasekaran, Saravana Mohan, Cai, Shuang, Patton, Tatiana, Lorentzen, Travis D., Liu, Wenke, Bocik, William E.

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Phen2Gene: rapid phenotype-driven gene prioritization for rare diseases by Zhao, Mengge, Havrilla, James M, Fang, Li, Chen, Ying, Peng, Jacqueline, Liu, Cong, Wu, Chao, Sarmady, Mahdi, Botas, Pablo, Isla, Julián, Lyon, Gholson J, Weng, Chunhua, Wang, Kai

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Factors Influencing Patient Satisfaction With Breast Augmentation: A BREAST-Q Effect of Magnitude Analysis by Jørgensen, Mads G, Hemmingsen, Mathilde N, Larsen, Andreas, Weltz, Tim K, Strålman, Kristina B, Andersen, Peter S, Nezame Sarmady, Faranak, Toyserkani, Navid M, Herly, Mikkel, Elberg, Jens J

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AnthOligo: automating the design of oligonucleotides for capture/enrichment technologies by Jayaraman, Pushkala, Mosbruger, Timothy, Hu, Taishan, Tairis, Nikolaos G, Wu, Chao, Clark, Peter M, D’Arcy, Monica, Ferriola, Deborah, Mackiewicz, Katarzyna, Gai, Xiaowu, Monos, Dimitrios, Sarmady, Mahdi

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A comparison of survival analysis methods for cancer gene expression RNA-Sequencing data by Raman, Pichai, Zimmerman, Samuel, Rathi, Komal S., de Torrenté, Laurence, Sarmady, Mahdi, Wu, Chao, Leipzig, Jeremy, Taylor, Deanne M., Tozeren, Aydin, Mar, Jessica C.

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Efficient digest of high-throughput sequencing data in a reproducible report by Zhang, Zhe, Leipzig, Jeremy, Sasson, Ariella, Yu, Angela M, Perin, Juan C, Xie, Hongbo M, Sarmady, Mahdi, Warren, Patrick V, White, Peter S

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