Machine Learning Sequence Modeling Identifies Gene Regulatory Responses to Bone Marrow Stromal Interactions in Multiple Myeloma by Razavi-Mohseni, Milad, Shigaki, Dustin, Beer, Michael A

Get full text

Enhancer Predictions and Genome-Wide Regulatory Circuits by Beer, Michael A, Shigaki, Dustin, Huangfu, Danwei

Request full text

Machine learning identifies activation of RUNX/AP-1 as drivers of mesenchymal and fibrotic regulatory programs in gastric cancer by Razavi-Mohseni, Milad, Huang, Weitai, Guo, Yu A, Shigaki, Dustin, Ho, Shamaine Wei Ting, Tan, Patrick, Skanderup, Anders J, Beer, Michael A

Get full text

CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods by Jain, Shantanu, Bakolitsa, Constantina, Brenner, Steven E., Radivojac, Predrag, Moult, John, Repo, Susanna, Hoskins, Roger A., Andreoletti, Gaia, Barsky, Daniel, Chellapan, Ajithavalli, Chu, Hoyin, Dabbiru, Navya, Kollipara, Naveen K., Ly, Melissa, Neumann, Andrew J., Pal, Lipika R., Odell, Eric, Pandey, Gaurav, Peters-Petrulewicz, Robin C., Srinivasan, Rajgopal, Yee, Stephen F., Yeleswarapu, Sri Jyothsna, Zuhl, Maya, Adebali, Ogun, Patra, Ayoti, Beer, Michael A., Hosur, Raghavendra, Peng, Jian, Bernard, Brady M., Berry, Michael, Dong, Shengcheng, Boyle, Alan P., Adhikari, Aashish, Chen, Jingqi, Hu, Zhiqiang, Wang, Robert, Wang, Yaqiong, Miller, Maximilian, Wang, Yanran, Bromberg, Yana, Turina, Paola, Capriotti, Emidio, Han, James J., Ozturk, Kivilcim, Carter, Hannah, Babbi, Giulia, Bovo, Samuele, Di Lena, Pietro, Martelli, Pier Luigi, Savojardo, Castrense, Casadio, Rita, Cline, Melissa S., De Baets, Greet, Bonache, Sandra, Díez, Orland, Gutiérrez-Enríquez, Sara, Fernández, Alejandro, Montalban, Gemma, Ootes, Lars, Özkan, Selen, Padilla, Natàlia, Riera, Casandra, De la Cruz, Xavier, Diekhans, Mark, Huwe, Peter J., Wei, Qiong, Xu, Qifang, Dunbrack, Roland L., Gotea, Valer, Elnitski, Laura, Margolin, Gennady, Fariselli, Piero, Kulakovskiy, Ivan V., Makeev, Vsevolod J., Penzar, Dmitry D., Vorontsov, Ilya E., Favorov, Alexander V., Forman, Julia R., Hasenahuer, Marcia, Fornasari, Maria S., Parisi, Gustavo, Avsec, Ziga, Çelik, Muhammed H., Nguyen, Thi Yen Duong, Gagneur, Julien, Shi, Fang-Yuan, Edwards, Matthew D., Guo, Yuchun, Tian, Kevin, Zeng, Haoyang, Gifford, David K., Göke, Jonathan, Zaucha, Jan, Gough, Julian, Ritchie, Graham R. S., Frankish, Adam, Mudge, Jonathan M., Harrow, Jennifer, Young, Erin L., Yu, Yao

Get full text

Deciphering the impact of genomic variation on function by Engreitz, Jesse M., Lawson, Heather A., Singh, Harinder, Starita, Lea M., Hon, Gary C., Carter, Hannah, Sahni, Nidhi, Reddy, Timothy E., Lin, Xihong, Li, Yun, Munshi, Nikhil V., Chahrour, Maria H., Boyle, Alan P., Hitz, Benjamin C., Mortazavi, Ali, Craven, Mark, Mohlke, Karen L., Pinello, Luca, Wang, Ting, Kundaje, Anshul, Yue, Feng, Cody, Sarah, Farrell, Nina P., Love, Michael I., Muffley, Lara A., Pazin, Michael J., Reese, Fairlie, Van Buren, Eric, Dey, Kushal K., Kircher, Martin, Ma, Jian, Radivojac, Predrag, Balliu, Brunilda, Williams, Brian A., Huangfu, Danwei, Park, Chong Y., Quertermous, Thomas, Das, Jishnu, Calderwood, Michael A., Fowler, Douglas M., Vidal, Marc, Ferreira, Lucas, Mooney, Sean D., Pejaver, Vikas, Zhao, Jingjing, Gazal, Steven, Koch, Evan, Reilly, Steven K., Sunyaev, Shamil, Carpenter, Anne E., Buenrostro, Jason D., Leslie, Christina S., Savage, Rachel E., Giric, Stefanija, Luo, Chongyuan, Plath, Kathrin, Barrera, Alejandro, Schubach, Max, Gschwind, Andreas R., Moore, Jill E., Ahituv, Nadav, Yi, S. Stephen, Hallgrimsdottir, Ingileif, Gaulton, Kyle J., Sakaue, Saori, Booeshaghi, Sina, Mattei, Eugenio, Nair, Surag, Pachter, Lior, Wang, Austin T., Shendure, Jay, Agarwal, Vikram, Blair, Andrew, Chalkiadakis, Theofilos, Chardon, Florence M., Dash, Pyaree M., Deng, Chengyu, Hamazaki, Nobuhiko, Keukeleire, Pia, Kubo, Connor, Lalanne, Jean-Benoît, Maass, Thorben, Martin, Beth, McDiarmid, Troy A., Nobuhara, Mai, Page, Nicholas F., Regalado, Sam, Sims, Jasmine, Ushiki, Aki, Best, Sabrina M., Boyle, Gabe, Camp, Nathan, Casadei, Silvia, Da, Estelle Y., Dawood, Moez, Dawson, Samantha C., Fayer, Shawn, Hamm, Audrey, James, Richard G., Jarvik, Gail P.

Get full text