Computational methods for chromosome-scale haplotype reconstruction by Garg, Shilpa

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Towards routine chromosome-scale haplotype-resolved reconstruction in cancer genomics by Garg, Shilpa

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Chromosome-scale, haplotype-resolved assembly of human genomes by Garg, Shilpa, Fungtammasan, Arkarachai, Carroll, Andrew, Chou, Mike, Schmitt, Anthony, Zhou, Xiang, Mac, Stephen, Peluso, Paul, Hatas, Emily, Ghurye, Jay, Maguire, Jared, Mahmoud, Medhat, Cheng, Haoyu, Heller, David, Zook, Justin M., Moemke, Tobias, Marschall, Tobias, Sedlazeck, Fritz J., Aach, John, Chin, Chen-Shan, Church, George M., Li, Heng

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Variation graph toolkit improves read mapping by representing genetic variation in the reference by Garrison, Erik, Sirén, Jouni, Novak, Adam M, Hickey, Glenn, Eizenga, Jordan M, Dawson, Eric T, Jones, William, Garg, Shilpa, Markello, Charles, Lin, Michael F, Paten, Benedict, Durbin, Richard

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Pangenome Graphs by Eizenga, Jordan M, Novak, Adam M, Sibbesen, Jonas A, Heumos, Simon, Ghaffaari, Ali, Hickey, Glenn, Chang, Xian, Seaman, Josiah D, Rounthwaite, Robin, Ebler, Jana, Rautiainen, Mikko, Garg, Shilpa, Paten, Benedict, Marschall, Tobias, Sirén, Jouni, Garrison, Erik

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Impact of Institutional Environment on Inward FDI: A Case of Select Emerging Market Economies by Bhasin, Niti, Garg, Shilpa

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Discrete cosine transform interpolation based design of two-dimensional FIR fractional order digital differentiator by garg, Shilpa, Yadav, Richa, Kumar, Manjeet

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Read-based phasing of related individuals by Garg, Shilpa, Martin, Marcel, Marschall, Tobias

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A graph-based approach to diploid genome assembly by Garg, Shilpa, Rautiainen, Mikko, Novak, Adam M, Garrison, Erik, Durbin, Richard, Marschall, Tobias

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Semi-automated assembly of high-quality diploid human reference genomes by Jarvis, Erich D., Formenti, Giulio, Rhie, Arang, Guarracino, Andrea, Yang, Chentao, Wood, Jonathan, Tracey, Alan, Thibaud-Nissen, Francoise, Vollger, Mitchell R., Porubsky, David, Cheng, Haoyu, Asri, Mobin, Logsdon, Glennis A., Carnevali, Paolo, Chaisson, Mark J. P., Chin, Chen-Shan, Cody, Sarah, Collins, Joanna, Ebert, Peter, Escalona, Merly, Fedrigo, Olivier, Fulton, Robert S., Fulton, Lucinda L., Garg, Shilpa, Gerton, Jennifer L., Ghurye, Jay, Granat, Anastasiya, Green, Richard E., Harvey, William, Hasenfeld, Patrick, Hastie, Alex, Haukness, Marina, Jaeger, Erich B., Jain, Miten, Kirsche, Melanie, Kolmogorov, Mikhail, Korbel, Jan O., Koren, Sergey, Korlach, Jonas, Lee, Joyce, Li, Daofeng, Lindsay, Tina, Lucas, Julian, Luo, Feng, Marschall, Tobias, Mitchell, Matthew W., McDaniel, Jennifer, Nie, Fan, Olsen, Hugh E., Olson, Nathan D., Pesout, Trevor, Potapova, Tamara, Puiu, Daniela, Regier, Allison, Ruan, Jue, Salzberg, Steven L., Sanders, Ashley D., Schatz, Michael C., Schmitt, Anthony, Schneider, Valerie A., Selvaraj, Siddarth, Shafin, Kishwar, Shumate, Alaina, Stitziel, Nathan O., Stober, Catherine, Torrance, James, Wagner, Justin, Wang, Jianxin, Wenger, Aaron, Xiao, Chuanle, Zimin, Aleksey V., Zhang, Guojie, Wang, Ting, Li, Heng, Garrison, Erik, Haussler, David, Hall, Ira, Zook, Justin M., Eichler, Evan E., Phillippy, Adam M., Paten, Benedict, Howe, Kerstin, Miga, Karen H.

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Dense and accurate whole-chromosome haplotyping of individual genomes by Porubsky, David, Garg, Shilpa, Sanders, Ashley D., Korbel, Jan O., Guryev, Victor, Lansdorp, Peter M., Marschall, Tobias

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Editorial: Long-read sequencing-Pitfalls, benefits and success stories by Wohlers, Inken, Garg, Shilpa, Hehir-Kwa, Jayne Y

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Enabling large-scale genome editing at repetitive elements by reducing DNA nicking by Smith, Cory J, Castanon, Oscar, Said, Khaled, Volf, Verena, Khoshakhlagh, Parastoo, Hornick, Amanda, Ferreira, Raphael, Wu, Chun-Ting, Güell, Marc, Garg, Shilpa, Ng, Alex H M, Myllykallio, Hannu, Church, George M

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A diploid assembly-based benchmark for variants in the major histocompatibility complex by Chin, Chen-Shan, Wagner, Justin, Zeng, Qiandong, Garrison, Erik, Garg, Shilpa, Fungtammasan, Arkarachai, Rautiainen, Mikko, Aganezov, Sergey, Kirsche, Melanie, Zarate, Samantha, Schatz, Michael C., Xiao, Chunlin, Rowell, William J., Markello, Charles, Farek, Jesse, Sedlazeck, Fritz J., Bansal, Vikas, Yoo, Byunggil, Miller, Neil, Zhou, Xin, Carroll, Andrew, Barrio, Alvaro Martinez, Salit, Marc, Marschall, Tobias, Dilthey, Alexander T., Zook, Justin M.

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Strain dynamics of contaminating bacteria modulate the yield of ethanol biorefineries by de Oliveira Lino, Felipe Senne, Garg, Shilpa, Li, Simone S., Misiakou, Maria-Anna, Kang, Kang, Vale da Costa, Bruno Labate, Beyer-Pedersen, Tobias Svend-Aage, Giacon, Thamiris Guerra, Basso, Thiago Olitta, Panagiotou, Gianni, Sommer, Morten Otto Alexander

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Role of Morphometry as Diagnostic Adjunct in Evaluating Premalignant and Malignant Cervical Cytology by Sonia Hasija, Shivani Kalhan, Shilpa Garg, Puja Sharma, Pawan Singh, Bhawna Sethi

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Correlation of Nuclear Morphometry with Clinicopathologic Parameters in Malignant Breast Aspirates by Kalhan, Shivani, Garg, Shilpa, Satarkar, Rahul, Sharma, Puja, Hasija, Sonia, Sharma, Sonia

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Acneiform eruptions and inflammatory striae as probable reactions to adalimumab by Shilpa Garg, Priyanka Borde Bisht

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Sclerosing Stromal Tumor: A Rare Ovarian Neoplasm by Bairwa, Shilpa, Satarkar, Rahul Narayan, Kalhan, Shivani, Garg, Shilpa, Sangwaiya, Ashok, Singh, Pawan

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Correlation of Nuclear Morphometry with Clinicopathologic Parameters in Malignant Breast Aspirates by Kalhan, Shivani, Garg, Shilpa, Satarkar, Rahul N., Sharma, Puja, Hasija, Sonia, Sharma, Sonia

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