MHC class I-associated peptides derive from selective regions of the human genome by Pearson, Hillary, Daouda, Tariq, Granados, Diana Paola, Durette, Chantal, Bonneil, Eric, Courcelles, Mathieu, Rodenbrock, Anja, Laverdure, Jean-Philippe, Côté, Caroline, Mader, Sylvie, Lemieux, Sébastien, Thibault, Pierre, Perreault, Claude

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Global proteogenomic analysis of human MHC class I-associated peptides derived from non-canonical reading frames by Laumont, Céline M., Daouda, Tariq, Laverdure, Jean-Philippe, Bonneil, Éric, Caron-Lizotte, Olivier, Hardy, Marie-Pierre, Granados, Diana P., Durette, Chantal, Lemieux, Sébastien, Thibault, Pierre, Perreault, Claude

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CAMAP: Artificial neural networks unveil the role of codon arrangement in modulating MHC-I peptides presentation by Daouda, Tariq, Dumont-Lagacé, Maude, Feghaly, Albert, Benslimane, Yahya, Panes, Rébecca, Courcelles, Mathieu, Benhammadi, Mohamed, Harrington, Lea, Thibault, Pierre, Major, François, Bengio, Yoshua, Gagnon, Étienne, Lemieux, Sébastien, Perreault, Claude

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Misclassified: identification of zoonotic transition biomarker candidates for influenza A viruses using deep neural network by Hatibi, Nissrine, Dumont-Lagacé, Maude, Alouani, Zakaria, El Fatimy, Rachid, Abik, Mounia, Daouda, Tariq

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pyGeno: A Python package for precision medicine and proteogenomics [version 2; peer review: 1 approved, 2 approved with reservations] by Daouda, Tariq, Perreault, Claude, Lemieux, Sébastien

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Qualitative Changes in Cortical Thymic Epithelial Cells Drive Postpartum Thymic Regeneration by Dumont-Lagacé, Maude, Daouda, Tariq, Depoërs, Lucyle, Zumer, Jérémie, Benslimane, Yahya, Brochu, Sylvie, Harrington, Lea, Lemieux, Sébastien, Perreault, Claude

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Therapeutic potential of snake venom: Toxin distribution and opportunities in deep learning for novel drug discovery by Bedraoui, Anas, Suntravat, Montamas, El Mejjad, Salim, Enezari, Salwa, Oukkache, Naoual, Sanchez, Elda E., Galan, Jacob A., El Fatimy, Rachid, Daouda, Tariq

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Detection of Quiescent Radioresistant Epithelial Progenitors in the Adult Thymus by Dumont-Lagacé, Maude, Gerbe, Hervé, Daouda, Tariq, Laverdure, Jean-Philippe, Brochu, Sylvie, Lemieux, Sébastien, Gagnon, Étienne, Perreault, Claude

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553 - THE UNCOVERED GENES IN OSTEOARTHRITIS by HAMDAN, YOUSRA, Anas, BEDRAOUI, loubna, MAZINI, Said, ZAYANE, Boubker, ESSADKI, Tariq, DAOUDA, Rachid, EL FATIMY

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THE UNCOVERED GENES IN OSTEOARTHRITIS by HAMDAN, YOUSRA, Anas, BEDRAOUI, loubna, MAZINI, Said, ZAYANE, Boubker, ESSADKI, Tariq, DAOUDA, Rachid, EL FATIMY

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The convergence of artificial intelligence in toxinology and venomics by Bedraoui, Anas, El Mejjad, Salim, Enezari, Salwa, El Hajji, Fatima Zahra, Suntravat, Montamas, Elda, E. Sanchez, Galan, Jacob A., El Fatimy, Rachid, Daouda, Tariq

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MAPDP: A Cloud-Based Computational Platform for Immunopeptidomics Analyses by Courcelles, Mathieu, Durette, Chantal, Daouda, Tariq, Laverdure, Jean-Philippe, Vincent, Krystel, Lemieux, Sébastien, Perreault, Claude, Thibault, Pierre

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Impact of genomic polymorphisms on the repertoire of human MHC class I-associated peptides by Granados, Diana Paola, Sriranganadane, Dev, Daouda, Tariq, Zieger, Antoine, Laumont, Céline M., Caron-Lizotte, Olivier, Boucher, Geneviève, Hardy, Marie-Pierre, Gendron, Patrick, Côté, Caroline, Lemieux, Sébastien, Thibault, Pierre, Perreault, Claude

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CAMAP: Artificial neural networks unveil the role of codon arrangement in modulating MHC-I peptides presentation by Tariq Daouda, Maude Dumont-Lagacé, Albert Feghaly, Yahya Benslimane, Rébecca Panes, Mathieu Courcelles, Mohamed Benhammadi, Lea Harrington, Pierre Thibault, François Major, Yoshua Bengio, Étienne Gagnon, Sébastien Lemieux, Claude Perreault

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MHC I–associated peptides preferentially derive from transcripts bearing miRNA response elements by Granados, Diana Paola, Yahyaoui, Wafaa, Laumont, Céline M., Daouda, Tariq, Muratore-Schroeder, Tara L., Côté, Caroline, Laverdure, Jean-Philippe, Lemieux, Sébastien, Thibault, Pierre, Perreault, Claude

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pyGeno: A Python package for precision medicine and proteogenomics by Daouda, Tariq, Perreault, Claude, Lemieux, Sébastien

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Free Probability for predicting the performance of feed-forward fully connected neural networks by Chhaibi, Reda, Tariq Daouda, Kahn, Ezechiel

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Codon arrangement modulates MHC-I peptides presentation: implications for a SARS-CoV-2 peptide-based vaccine by Tariq Daouda, Dumont-Lagacé, Maude, Feghaly, Albert, Villani, Alexandra-Chloé

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Geodesics in fibered latent spaces: A geometric approach to learning correspondences between conditions by Tariq Daouda, Chhaibi, Reda, Prudencio Tossou, Villani, Alexandra-Chloé

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Holographic Neural Architectures by Tariq Daouda, Zumer, Jeremie, Perreault, Claude, Lemieux, Sébastien

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