Antibiotic-driven intestinal dysbiosis in pediatric short bowel syndrome is associated with persistently altered microbiome functions and gut-derived bloodstream infections by Thänert, Robert, Thänert, Anna, Ou, Jocelyn, Bajinting, Adam, Burnham, Carey-Ann D., Engelstad, Holly J., Tecos, Maria E., Ndao, I. Malick, Hall-Moore, Carla, Rouggly-Nickless, Colleen, Carl, Mike A., Rubin, Deborah C., Davidson, Nicholas O., Tarr, Phillip I., Warner, Barbara B., Dantas, Gautam, Warner, Brad W.

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Persisting uropathogenic Escherichia coli lineages show signatures of niche-specific within-host adaptation mediated by mobile genetic elements by Thänert, Robert, Choi, JooHee, Reske, Kimberly A., Hink, Tiffany, Thänert, Anna, Wallace, Meghan A., Wang, Bin, Seiler, Sondra, Cass, Candice, Bost, Margaret H., Struttmann, Emily L., Iqbal, Zainab Hassan, Sax, Steven R., Fraser, Victoria J., Baker, Arthur W., Foy, Katherine R., Williams, Brett, Xu, Ben, Capocci-Tolomeo, Pam, Lautenbach, Ebbing, Burnham, Carey-Ann D., Dubberke, Erik R., Kwon, Jennie H., Dantas, Gautam

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Gut microbiome correlates of recurrent urinary tract infection: a longitudinal, multi-center study by Choi, JooHee, Thänert, Robert, Reske, Kimberly A., Nickel, Katelin B., Olsen, Margaret A., Hink, Tiffany, Thänert, Anna, Wallace, Meghan A., Wang, Bin, Cass, Candice, Barlet, Margaret H., Struttmann, Emily L., Iqbal, Zainab Hassan, Sax, Steven R., Fraser, Victoria J., Baker, Arthur W., Foy, Katherine R., Williams, Brett, Xu, Ben, Capocci-Tolomeo, Pam, Lautenbach, Ebbing, Burnham, Carey-Ann D., Dubberke, Erik R., Dantas, Gautam, Kwon, Jennie H.

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Molecular profiling of tissue biopsies reveals unique signatures associated with streptococcal necrotizing soft tissue infections by Thänert, Robert, Itzek, Andreas, Hoßmann, Jörn, Hamisch, Domenica, Madsen, Martin Bruun, Hyldegaard, Ole, Skrede, Steinar, Bruun, Trond, Norrby-Teglund, Anna, Medina, Eva, Pieper, Dietmar H.

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