Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies by Neale, David B, Wegrzyn, Jill L, Stevens, Kristian A, Zimin, Aleksey V, Puiu, Daniela, Crepeau, Marc W, Cardeno, Charis, Koriabine, Maxim, Holtz-Morris, Ann E, Liechty, John D, Martínez-García, Pedro J, Vasquez-Gross, Hans A, Lin, Brian Y, Zieve, Jacob J, Dougherty, William M, Fuentes-Soriano, Sara, Wu, Le-Shin, Gilbert, Don, Marçais, Guillaume, Roberts, Michael, Holt, Carson, Yandell, Mark, Davis, John M, Smith, Katherine E, Dean, Jeffrey F D, Lorenz, W Walter, Whetten, Ross W, Sederoff, Ronald, Wheeler, Nicholas, McGuire, Patrick E, Main, Doreen, Loopstra, Carol A, Mockaitis, Keithanne, deJong, Pieter J, Yorke, James A, Salzberg, Steven L, Langley, Charles H

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A genome-wide comparison of recent chimpanzee and human segmental duplications by Eichler, Evan E, Cheng, Ze, Ventura, Mario, She, Xinwei, Khaitovich, Philipp, Graves, Tina, Osoegawa, Kazutoyo, Church, Deanna, DeJong, Pieter, Wilson, Richard K, Pääbo, Svante, Rocchi, Mariano

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BAC library resources for map-based cloning and physical map construction in barley (Hordeum vulgare L.) by Schulte, Daniela, Ariyadasa, Ruvini, Shi, Bujun, Fleury, Delphine, Saski, Chris, Atkins, Michael, deJong, Pieter, Wu, Cheng-Cang, Graner, Andreas, Langridge, Peter, Stein, Nils

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Marking embryonic stem cells with a 2A self-cleaving peptide: a NKX2-5 emerald GFP BAC reporter by Hsiao, Edward C, Yoshinaga, Yuko, Nguyen, Trieu D, Musone, Stacy L, Kim, Judy E, Swinton, Paul, Espineda, Isidro, Manalac, Carlota, deJong, Pieter J, Conklin, Bruce R

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Insights into the loblolly pine genome: characterization of BAC and fosmid sequences by Wegrzyn, Jill L, Lin, Brian Y, Zieve, Jacob J, Dougherty, William M, Martínez-García, Pedro J, Koriabine, Maxim, Holtz-Morris, Ann, deJong, Pieter, Crepeau, Marc, Langley, Charles H, Puiu, Daniela, Salzberg, Steven L, Neale, David B, Stevens, Kristian A

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1-Mb resolution array-based comparative genomic hybridization using a BAC clone set optimized for cancer gene analysis by Greshock, Joel, Naylor, Tara L, Margolin, Adam, Diskin, Sharon, Cleaver, Stephen H, Futreal, P Andrew, deJong, Pieter J, Zhao, Shaying, Liebman, Michael, Weber, Barbara L

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Unique features of the loblolly pine (Pinus taeda L.) megagenome revealed through sequence annotation by Wegrzyn, Jill L, Liechty, John D, Stevens, Kristian A, Wu, Le-Shin, Loopstra, Carol A, Vasquez-Gross, Hans A, Dougherty, William M, Lin, Brian Y, Zieve, Jacob J, Martínez-García, Pedro J, Holt, Carson, Yandell, Mark, Zimin, Aleksey V, Yorke, James A, Crepeau, Marc W, Puiu, Daniela, Salzberg, Steven L, Dejong, Pieter J, Mockaitis, Keithanne, Main, Doreen, Langley, Charles H, Neale, David B

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Biomedical applications and studies of molecular evolution: a proposal for a primate genomic library resource by Eichler, Evan E, DeJong, Pieter J

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Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. [Erratum: 2005 Feb. 17, v. 433, no. 7027, p. 777.] by Hillier, L.W., Miller, W., Birney, E., Warren, Wesley, Hardison, R.C., Ponting, C.P., Bork, Peer, Burt, D.W., Groenen, M.A.M., Delany, M.E., Dodgson, J.B., Chinwalla, A.T., Cliften, P.F., Clifton, S.W., Delehaunty, K.D., Fronick, C., Fulton, R.S., Graves, T.A., Kremitzki, C., Layman, D., Magrini, V., Mcpherson, J.D., Miner, T.L., Minx, P., Nash, W.E., Nhan, M.N., Nelson, J.O., Oddy, L.G., Pohl, C.S., Randall-Maher, J., Smith, S.M., Wallis, J.W., Yang, S.P., Romanov, M.N., Rondelli, C.M., Paton, B., Smith, J., Morrice, D., Daniels, L., Tempest, H.G., Robertson, L., Masabanda, J.S., Griffin, D.K., Vignal, Alain, Fillon, Valerie, Jacobbson, L., Kerje, S., Andersson, Leif, Crooijmans, R.P.M.A., Aerts, J., van Der Poel, J.J., Ellegren, H., Caldwell, R.B., Hubbard, S.J., Grafham, D.V., Kierzek, A.M., Mclaren, S.R., Overton, I.M., Arakawa, H., Beattie, K.J., Bezzubov, Y., Boardman, P.E., Bonfield, J.K., Croning, M.D.R., Davies, R.M., Francis, M.D., Humphray, S.J., Scott, C.E., Taylor, R.G., Tickle, C., Brown, W.R.A., Rogers, J., Buerstedde, J.M., Wilson, S.A., Stubbs, L., Ovcharenko, I., Gordon, Laurence, Lucas, S., Miller, M.M., Inoko, H., Shiina, T., Kaufman, Jim, Salomonsen, J., Skjoedt, K., Wong, G.K.S., Wang, J., Liu, B., Yu, J., Yang, H.M., Nefedov, M., Koriabine, M., Dejong, P.J., Goodstadt, L., Webber, C., Dickens, N.J., Letunic, I., Suyama, M., Torrents, D., von Mering, C., Zdobnov, E.M.

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From Returns to Tweets and Back: An Investigation of the Stocks in the Dow Jones Industrial Average by de Jong, Pieter, Elfayoumy, Sherif, Schnusenberg, Oliver

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Genome sequence, comparative analysis and haplotype structure of the domestic dog by Lindblad-Toh, K, Wade, C.M, Mikkelsen, T.S, Karlsson, E.K, Jaffe, D.B, Kamal, M, Clamp, M, Chang, J.L, Kulbokas, E.J. III, Zody, M.C

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SOUTHERN ANALYSIS OF GENOMIC ALTERATIONS IN GAMMA-RAY-INDUCED APRT- HAMSTER CELL MUTANTS by Grosovsky, Andrew J, Drobetsky, Elliot A, deJong, Pieter J, Glickman, Barry W

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The imprinted domain in mouse distal Chromosome 7: reagents for mutagenesis and sequencing by Day, C D, Smilinich, N J, Fitzpatrick, G V, deJong, P J, Shows, T B, Higgins, M J

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BAC clones generated from sheared DNA by Osoegawa, Kazutoyo, Vessere, Gery M., Li Shu, Chung, Hoskins, Roger A., Abad, José P., de Pablos, Beatriz, Villasante, Alfredo, de Jong, Pieter J.

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Lanthanum Oxide Supported on Carbon Nanofibers as Solid Base Catalysts by Frey, Anne Mette, Bitter, Johannes Hendrik, de Jong, Krijn Pieter

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Biomedical Applications and Studies of Molecular Evolution: A Proposal for a Primate Genomic Library Resource: Figure 1 by Eichler, Evan E., DeJong, Pieter J.

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A genome-wide comparison of recent chimpanzee and human segmental duplications : The chimpanzee genome by ZE CHENG, VENTURA, Mario, ROCCHI, Mariano, EICHLER, Evan E, XINWEI SHE, KHAITOVICH, Philipp, GRAVES, Tina, OSOEGAWA, Kazutoyo, CHURCH, Deanna, DEJONG, Pieter, WILSON, Richard K, PÄÄBO, Svante

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P29: From “chromosome painting” to “array painting” to identify the evolutionarym breakpoint sequences in  Hylobates karyotypes by Carbone, Lucia, Vessere, Gery, Osegawa, Kazutoyo, Mootnick, Alan, Wiemberg, Johannes, deJong, Pieter J.

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A 1-Mb Physical Map and PAC Contig of the Imprinted Domain in 11p15.5 That Contains TAPA1 and the BWSCR1/WT2 Region by Reid, Laura H., Davies, Chris, Cooper, Paul R., Crider-Miller, Shyra J., Sait, Sheila N.J., Nowak, Norma J., Evans, Glen, Stanbridge, Eric J., dejong, Pieter, Shows, Thomas B., Weissman, Bernard E., Higgins, Michael J.

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Absence of imprinting in U2AFBPL, a human homologue of the imprinted mouse gene U2afbp-rs by Pearsall, R S, Shibata, H, Brozowska, A, Yoshino, K, Okuda, K, deJong, P J, Plass, C, Chapman, V M, Hayashizaki, Y, Held, W A

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