Enhanced Kinship Analysis and STR-based DNA Typing for Human Identification in Mass Fatality Incidents: The Swissair Flight 111 Disaster

• Published in: Journal of forensic sciences 2004-09, Vol.49 (5), p.JFS2003311-15
• Main Authors: Leclair, B, Frégeau, CJ, Bowen, KL, Fourney, RM
• Format: Article
• Language: English
• Subjects: Accidents, Aviation; Algorithms; Alleles; Bioinformatics; Deoxyribonucleic acid; DNA; DNA Fingerprinting - methods; Enzymes; Fatalities; Female; Forensic sciences; Genetic Variation; Genotype; Humans; Likelihood Functions; Male; Mutation; Pedigree; Polymerase Chain Reaction; Sex Determination Processes; Software; Tandem Repeat Sequences
• ISSN: 0022-1198; 1556-4029
• DOI: 10.1520/JFS2003311

A bioinformatic tool was developed to assist with the victim identification initiative that followed the Swissair Flight 111 disaster. Making use of short tandem repeat (STR) DNA typing data generated with AmpF/STR® Profiler Plus™ (PP) and AmpF/STR® COfiler™(CO) kits, the software systematically compared each available STR genotype with every other genotype. The matching algorithm was based on the search for: (i) direct matches to genotypes derived from personal effects; and (ii) potential kinship associations between victims and next-of-kin, as measured by allele sharing at individual loci. The software greatly assisted parentage analysis by enabling kinship evaluation in situations where complete parentage trios were unavailable and, in some situations, with distantly related relatives. Exclusion of fortuitous kinship associations (FKA) was made possible through the recovery at the disaster site of at least one remains for every sought-after victim, and was incorporated into the kinship software. The data from the 13 combined STR loci produced 6 and 23 times fewer FKAs when compared with PP alone and AmpF/STR® Profiler™ (PR) alone, respectively. Identification leads or confirmations of identification were obtained for 218 victims for which DNA reference samples (personal effects and kin) had been submitted. Confirmation of an inferred kinship association was sought through frequency and likelihood calculations, as well as corroborative data from other identification modalities. The use of a simple, yet powerful, automated genotype comparison approach and the use of megaplexes with high power of discrimination (PD) values extended considerably the identification capabilities in the case of the Swissair disaster. The DNA typing identification modality proved to be a valuable component of the large arsenal of identification tools deployed in the aftermath of this disaster.