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Phylogeny and Biogeographic History of Astrophytum (Cactaceae)
Despite efforts for a complete phylogeny of Cactaceae, generic circumscription and species level relationships remain unsolved. Within Astrophytum one species is assigned to a different genus (Digitostigma) and two are often treated as a single species (A. myriostigma and A. coahuilense). Astrophytu...
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Published in: | Systematic botany 2016-01, Vol.40 (4), p.1022-1030 |
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creator | Vázquez-Lobo, Alejandra Morales, Gisela Aguilar Arias, Salvador Golubov, Jordan Hernández-Hernández, Tania Mandujano, María C. |
description | Despite efforts for a complete phylogeny of Cactaceae, generic circumscription and species level relationships remain unsolved. Within Astrophytum one species is assigned to a different genus (Digitostigma) and two are often treated as a single species (A. myriostigma and A. coahuilense). Astrophytum is endemic to the Chihuahuan Desert, but may also be found in adjacent regions. We reconstructed the phylogeny to date the origin of clades and infer the biogeographic patterns of Astrophytum in order to understand the relationships between group members. Three sequences of chloroplast DNA (rbcL gene, trnL-trnF intergenic spacer, and trnK-matK region) were used with Bayesian and Maximum likelihood methods to generate a phylogeny. Divergence times for each node were estimated using an uncorrelated lognormal clock (BEAST) and inferred ancestral distribution using RASP. Astrophytum is monophyletic, with six species grouped in two main clades. Astrophytum caput-medusae (recognized as Digitostigma) is derived within Astrophytum. Individuals of A. myriostigma and A. coahuilense are grouped in independent clades, supporting their recognition as distinct species. Data suggest posterior diversification in the Late Miocene, during a transition to drier climates in North America. Occurrences of Astrophytum species outside of the Chihuahuan Desert are attributable to two recent independent events. |
doi_str_mv | 10.1600/036364415X690094 |
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Within Astrophytum one species is assigned to a different genus (Digitostigma) and two are often treated as a single species (A. myriostigma and A. coahuilense). Astrophytum is endemic to the Chihuahuan Desert, but may also be found in adjacent regions. We reconstructed the phylogeny to date the origin of clades and infer the biogeographic patterns of Astrophytum in order to understand the relationships between group members. Three sequences of chloroplast DNA (rbcL gene, trnL-trnF intergenic spacer, and trnK-matK region) were used with Bayesian and Maximum likelihood methods to generate a phylogeny. Divergence times for each node were estimated using an uncorrelated lognormal clock (BEAST) and inferred ancestral distribution using RASP. Astrophytum is monophyletic, with six species grouped in two main clades. Astrophytum caput-medusae (recognized as Digitostigma) is derived within Astrophytum. Individuals of A. myriostigma and A. coahuilense are grouped in independent clades, supporting their recognition as distinct species. Data suggest posterior diversification in the Late Miocene, during a transition to drier climates in North America. Occurrences of Astrophytum species outside of the Chihuahuan Desert are attributable to two recent independent events.</description><identifier>ISSN: 0363-6445</identifier><identifier>EISSN: 1548-2324</identifier><identifier>DOI: 10.1600/036364415X690094</identifier><language>eng</language><publisher>American Society of Plant Toxonomists</publisher><subject>Astrophytum ; biogeography ; Cacteae ; Cacti ; Chihuahuan Desert ; climate ; genes ; Genetic aspects ; intergenic DNA ; monophyly ; Natural history ; nucleotide sequences ; Observations ; Phylogeny ; plant taxonomy ; ribulose-bisphosphate carboxylase</subject><ispartof>Systematic botany, 2016-01, Vol.40 (4), p.1022-1030</ispartof><rights>Copyright 2015 by the American Society of Plant Taxonomists</rights><rights>Copyright 2015 American Society of Plant Taxonomists</rights><rights>COPYRIGHT 2016 American Society of Plant Taxonomists</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-b529t-a3ed82463b99406f5d1a36a0ce342e07ca01deb4b05ff31093b2d60cfbcbf54c3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/43949513$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/43949513$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,776,780,27903,27904,58216,58449</link.rule.ids></links><search><creatorcontrib>Vázquez-Lobo, Alejandra</creatorcontrib><creatorcontrib>Morales, Gisela Aguilar</creatorcontrib><creatorcontrib>Arias, Salvador</creatorcontrib><creatorcontrib>Golubov, Jordan</creatorcontrib><creatorcontrib>Hernández-Hernández, Tania</creatorcontrib><creatorcontrib>Mandujano, María C.</creatorcontrib><title>Phylogeny and Biogeographic History of Astrophytum (Cactaceae)</title><title>Systematic botany</title><description>Despite efforts for a complete phylogeny of Cactaceae, generic circumscription and species level relationships remain unsolved. Within Astrophytum one species is assigned to a different genus (Digitostigma) and two are often treated as a single species (A. myriostigma and A. coahuilense). Astrophytum is endemic to the Chihuahuan Desert, but may also be found in adjacent regions. We reconstructed the phylogeny to date the origin of clades and infer the biogeographic patterns of Astrophytum in order to understand the relationships between group members. Three sequences of chloroplast DNA (rbcL gene, trnL-trnF intergenic spacer, and trnK-matK region) were used with Bayesian and Maximum likelihood methods to generate a phylogeny. Divergence times for each node were estimated using an uncorrelated lognormal clock (BEAST) and inferred ancestral distribution using RASP. Astrophytum is monophyletic, with six species grouped in two main clades. Astrophytum caput-medusae (recognized as Digitostigma) is derived within Astrophytum. Individuals of A. myriostigma and A. coahuilense are grouped in independent clades, supporting their recognition as distinct species. Data suggest posterior diversification in the Late Miocene, during a transition to drier climates in North America. Occurrences of Astrophytum species outside of the Chihuahuan Desert are attributable to two recent independent events.</description><subject>Astrophytum</subject><subject>biogeography</subject><subject>Cacteae</subject><subject>Cacti</subject><subject>Chihuahuan Desert</subject><subject>climate</subject><subject>genes</subject><subject>Genetic aspects</subject><subject>intergenic DNA</subject><subject>monophyly</subject><subject>Natural history</subject><subject>nucleotide sequences</subject><subject>Observations</subject><subject>Phylogeny</subject><subject>plant taxonomy</subject><subject>ribulose-bisphosphate carboxylase</subject><issn>0363-6445</issn><issn>1548-2324</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNqFkMFrFDEUxoMouFbvXsQ52sPUl0kmdi7KuqgtFCrWgrfHm0wym2V3siRZcfzrzXQWpYKYHPLI-74vLz_GnnM44wrgNQgllJS8_qYagEY-YAtey_OyEpV8yBZTu8z9-jF7EuMGskQBX7C3n9fj1vdmGAsauuK9y7XvA-3XThcXLiYfxsLbYhlT8Pv1mA674tWKdCJtyJw-ZY8sbaN5djxP2O3HD19XF-XV9afL1fKqbOuqSSUJ051XUom2aSQoW3echCLQRsjKwBtNwDvTyhZqawWHRrRVp0DbVre2llqcsLM5t6etQTdYnwLpvDuzc9oPxrp8v8z_l5WouciG03uGrEnmR-rpECNe3ny5r4VZq4OPMRiL--B2FEbkgBNc_BtutryYLZuJ0G-9FI1s5sh3c98NmW0i3PhDGDIhpLhPGFusgCuEuyXhWIBECimfHHLC9T8SnJ5DjkPV-F3CIHNglcGBQi4FYGcsHbYJEwXsf2K8S3w5J1rySH1wEW9vpjGm96ah_1Bunc9M_4_hF5BPuRw</recordid><startdate>20160101</startdate><enddate>20160101</enddate><creator>Vázquez-Lobo, Alejandra</creator><creator>Morales, Gisela Aguilar</creator><creator>Arias, Salvador</creator><creator>Golubov, Jordan</creator><creator>Hernández-Hernández, Tania</creator><creator>Mandujano, María C.</creator><general>American Society of Plant Toxonomists</general><general>The American Society of Plant Taxonomists, Inc</general><general>American Society of Plant Taxonomists, Inc</general><general>American Society of Plant Taxonomists</general><scope>FBQ</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ISR</scope></search><sort><creationdate>20160101</creationdate><title>Phylogeny and Biogeographic History of Astrophytum (Cactaceae)</title><author>Vázquez-Lobo, Alejandra ; Morales, Gisela Aguilar ; Arias, Salvador ; Golubov, Jordan ; Hernández-Hernández, Tania ; Mandujano, María C.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-b529t-a3ed82463b99406f5d1a36a0ce342e07ca01deb4b05ff31093b2d60cfbcbf54c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Astrophytum</topic><topic>biogeography</topic><topic>Cacteae</topic><topic>Cacti</topic><topic>Chihuahuan Desert</topic><topic>climate</topic><topic>genes</topic><topic>Genetic aspects</topic><topic>intergenic DNA</topic><topic>monophyly</topic><topic>Natural history</topic><topic>nucleotide sequences</topic><topic>Observations</topic><topic>Phylogeny</topic><topic>plant taxonomy</topic><topic>ribulose-bisphosphate carboxylase</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Vázquez-Lobo, Alejandra</creatorcontrib><creatorcontrib>Morales, Gisela Aguilar</creatorcontrib><creatorcontrib>Arias, Salvador</creatorcontrib><creatorcontrib>Golubov, Jordan</creatorcontrib><creatorcontrib>Hernández-Hernández, Tania</creatorcontrib><creatorcontrib>Mandujano, María C.</creatorcontrib><collection>AGRIS</collection><collection>CrossRef</collection><collection>Gale In Context: Science</collection><jtitle>Systematic botany</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Vázquez-Lobo, Alejandra</au><au>Morales, Gisela Aguilar</au><au>Arias, Salvador</au><au>Golubov, Jordan</au><au>Hernández-Hernández, Tania</au><au>Mandujano, María C.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Phylogeny and Biogeographic History of Astrophytum (Cactaceae)</atitle><jtitle>Systematic botany</jtitle><date>2016-01-01</date><risdate>2016</risdate><volume>40</volume><issue>4</issue><spage>1022</spage><epage>1030</epage><pages>1022-1030</pages><issn>0363-6445</issn><eissn>1548-2324</eissn><abstract>Despite efforts for a complete phylogeny of Cactaceae, generic circumscription and species level relationships remain unsolved. Within Astrophytum one species is assigned to a different genus (Digitostigma) and two are often treated as a single species (A. myriostigma and A. coahuilense). Astrophytum is endemic to the Chihuahuan Desert, but may also be found in adjacent regions. We reconstructed the phylogeny to date the origin of clades and infer the biogeographic patterns of Astrophytum in order to understand the relationships between group members. Three sequences of chloroplast DNA (rbcL gene, trnL-trnF intergenic spacer, and trnK-matK region) were used with Bayesian and Maximum likelihood methods to generate a phylogeny. Divergence times for each node were estimated using an uncorrelated lognormal clock (BEAST) and inferred ancestral distribution using RASP. Astrophytum is monophyletic, with six species grouped in two main clades. Astrophytum caput-medusae (recognized as Digitostigma) is derived within Astrophytum. Individuals of A. myriostigma and A. coahuilense are grouped in independent clades, supporting their recognition as distinct species. Data suggest posterior diversification in the Late Miocene, during a transition to drier climates in North America. Occurrences of Astrophytum species outside of the Chihuahuan Desert are attributable to two recent independent events.</abstract><pub>American Society of Plant Toxonomists</pub><doi>10.1600/036364415X690094</doi><tpages>9</tpages></addata></record> |
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subjects | Astrophytum biogeography Cacteae Cacti Chihuahuan Desert climate genes Genetic aspects intergenic DNA monophyly Natural history nucleotide sequences Observations Phylogeny plant taxonomy ribulose-bisphosphate carboxylase |
title | Phylogeny and Biogeographic History of Astrophytum (Cactaceae) |
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