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Effect of metals ions on thermostable alkaline phytase from Bacillus subtilis YCJS isolated from soybean rhizosphere soil
A Bacillus sp.YCJS strain showing phytase activity was isolated, and the phytase-encoding gene was cloned and expressed in Escherichia coli. The 1,149-bp full-length gene encoded a 26-residue putative signal peptide and a 356-residue mature protein. The molecular weight was estimated to be 47.5 kDa...
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Published in: | Annals of microbiology 2014, Vol.64 (3), p.1123-1131 |
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description | A Bacillus sp.YCJS strain showing phytase activity was isolated, and the phytase-encoding gene was cloned and expressed in Escherichia coli. The 1,149-bp full-length gene encoded a 26-residue putative signal peptide and a 356-residue mature protein. The molecular weight was estimated to be 47.5 kDa by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. The purified recombinant enzyme phy(ycE) from E. coli exhibited a specific activity of 14 U mg⁻¹protein. The optimum pH and temperature were 6.0 and 50 °C, respectively. The thermal stability of phy(ycE) was drastically improved in the presence of calcium ions (Ca²⁺). Fluorescence analysis results indicated that compared with phy(ycE) without added Ca²⁺, phy(ycE) in the presence of Ca²⁺was more stable and the melting temperature improved from 47.8 to 62.4 °C. Circular dichroism spectrometric analysis revealed that the loss of enzymatic activity was most likely due to a conformational change, as the circular dichroism spectra of the holoenzyme and metal-depleted enzyme were significantly different. Compared with the Ca²⁺-reactivated enzyme, the La³⁺-reactivated enzyme did not undergo a significant recovery with respect to its conformation. The aromatic-sensitized terbium (Tb³⁺) fluorescence results indicated that five Tb³⁺could bind to each molecule of phy(ycE) and that there were two high-affinity and three low-affinity binding sites. |
doi_str_mv | 10.1007/s13213-013-0751-5 |
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The 1,149-bp full-length gene encoded a 26-residue putative signal peptide and a 356-residue mature protein. The molecular weight was estimated to be 47.5 kDa by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. The purified recombinant enzyme phy(ycE) from E. coli exhibited a specific activity of 14 U mg⁻¹protein. The optimum pH and temperature were 6.0 and 50 °C, respectively. The thermal stability of phy(ycE) was drastically improved in the presence of calcium ions (Ca²⁺). Fluorescence analysis results indicated that compared with phy(ycE) without added Ca²⁺, phy(ycE) in the presence of Ca²⁺was more stable and the melting temperature improved from 47.8 to 62.4 °C. Circular dichroism spectrometric analysis revealed that the loss of enzymatic activity was most likely due to a conformational change, as the circular dichroism spectra of the holoenzyme and metal-depleted enzyme were significantly different. Compared with the Ca²⁺-reactivated enzyme, the La³⁺-reactivated enzyme did not undergo a significant recovery with respect to its conformation. The aromatic-sensitized terbium (Tb³⁺) fluorescence results indicated that five Tb³⁺could bind to each molecule of phy(ycE) and that there were two high-affinity and three low-affinity binding sites.</description><identifier>ISSN: 1590-4261</identifier><identifier>EISSN: 1869-2044</identifier><identifier>DOI: 10.1007/s13213-013-0751-5</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer-Verlag</publisher><subject>Applied Microbiology ; Bacillus subtilis ; binding sites ; Biomedical and Life Sciences ; calcium ; enzyme activity ; Escherichia coli ; fluorescence ; genes ; ions ; Life Sciences ; Medical Microbiology ; melting point ; Microbial Ecology ; Microbial Genetics and Genomics ; Microbiology ; molecular weight ; Mycology ; Original Article ; phytases ; polyacrylamide gel electrophoresis ; rhizosphere ; signal peptide ; soil ; soybeans ; temperature ; terbium ; thermal stability</subject><ispartof>Annals of microbiology, 2014, Vol.64 (3), p.1123-1131</ispartof><rights>Springer-Verlag Berlin Heidelberg and the University of Milan 2013</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c425t-91c6edb523db20ca60ea9837545004aa847980721bd82d8fde0a2bd40b6b529e3</citedby><cites>FETCH-LOGICAL-c425t-91c6edb523db20ca60ea9837545004aa847980721bd82d8fde0a2bd40b6b529e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids></links><search><creatorcontrib>Yao, Ming-Ze</creatorcontrib><creatorcontrib>Lu, Wen-Liang</creatorcontrib><creatorcontrib>Chen, Ting-Gui</creatorcontrib><creatorcontrib>Wang, Wei</creatorcontrib><creatorcontrib>Fu, Yue-Jun</creatorcontrib><creatorcontrib>Yang, Bin-Sheng</creatorcontrib><creatorcontrib>Liang, Ai-Hua</creatorcontrib><title>Effect of metals ions on thermostable alkaline phytase from Bacillus subtilis YCJS isolated from soybean rhizosphere soil</title><title>Annals of microbiology</title><addtitle>Ann Microbiol</addtitle><description>A Bacillus sp.YCJS strain showing phytase activity was isolated, and the phytase-encoding gene was cloned and expressed in Escherichia coli. The 1,149-bp full-length gene encoded a 26-residue putative signal peptide and a 356-residue mature protein. The molecular weight was estimated to be 47.5 kDa by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. The purified recombinant enzyme phy(ycE) from E. coli exhibited a specific activity of 14 U mg⁻¹protein. The optimum pH and temperature were 6.0 and 50 °C, respectively. The thermal stability of phy(ycE) was drastically improved in the presence of calcium ions (Ca²⁺). Fluorescence analysis results indicated that compared with phy(ycE) without added Ca²⁺, phy(ycE) in the presence of Ca²⁺was more stable and the melting temperature improved from 47.8 to 62.4 °C. Circular dichroism spectrometric analysis revealed that the loss of enzymatic activity was most likely due to a conformational change, as the circular dichroism spectra of the holoenzyme and metal-depleted enzyme were significantly different. Compared with the Ca²⁺-reactivated enzyme, the La³⁺-reactivated enzyme did not undergo a significant recovery with respect to its conformation. The aromatic-sensitized terbium (Tb³⁺) fluorescence results indicated that five Tb³⁺could bind to each molecule of phy(ycE) and that there were two high-affinity and three low-affinity binding sites.</description><subject>Applied Microbiology</subject><subject>Bacillus subtilis</subject><subject>binding sites</subject><subject>Biomedical and Life Sciences</subject><subject>calcium</subject><subject>enzyme activity</subject><subject>Escherichia coli</subject><subject>fluorescence</subject><subject>genes</subject><subject>ions</subject><subject>Life Sciences</subject><subject>Medical Microbiology</subject><subject>melting point</subject><subject>Microbial Ecology</subject><subject>Microbial Genetics and Genomics</subject><subject>Microbiology</subject><subject>molecular weight</subject><subject>Mycology</subject><subject>Original Article</subject><subject>phytases</subject><subject>polyacrylamide gel electrophoresis</subject><subject>rhizosphere</subject><subject>signal peptide</subject><subject>soil</subject><subject>soybeans</subject><subject>temperature</subject><subject>terbium</subject><subject>thermal stability</subject><issn>1590-4261</issn><issn>1869-2044</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><recordid>eNp9kMtOwzAQRSMEEqXwAazwDwTGjp3HEqryUiUWpQtWlp04rYsTV550Eb4eV2HNYjSj0T13RjdJbincU4DiAWnGaJbCqQpBU3GWzGiZVykDzs_jLCpIOcvpZXKFuAfIK17xWTIu29bUA_Et6cygHBLreyS-J8POhM7joLQzRLlv5WxvyGE3DgoNaYPvyJOqrXNHJHjUg3UWydfifU0seqcG00wi9KM2qidhZ388HqKriTvrrpOLNt4zN399nmyel5-L13T18fK2eFylNWdiSCta56bRgmWNZlCrHIyqyqwQXABwpUpeVCUUjOqmZE3ZNgYU0w0HnUeoMtk8oZNvHTxiMK08BNupMEoK8pSdnLKTcKqYnRSRYRODUdtvTZB7fwx9fPNf6G6CWuWl2gaLcrNmQHMAYEVBi-wXmV19Iw</recordid><startdate>2014</startdate><enddate>2014</enddate><creator>Yao, Ming-Ze</creator><creator>Lu, Wen-Liang</creator><creator>Chen, Ting-Gui</creator><creator>Wang, Wei</creator><creator>Fu, Yue-Jun</creator><creator>Yang, Bin-Sheng</creator><creator>Liang, Ai-Hua</creator><general>Springer-Verlag</general><general>Springer Berlin Heidelberg</general><scope>FBQ</scope><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>2014</creationdate><title>Effect of metals ions on thermostable alkaline phytase from Bacillus subtilis YCJS isolated from soybean rhizosphere soil</title><author>Yao, Ming-Ze ; Lu, Wen-Liang ; Chen, Ting-Gui ; Wang, Wei ; Fu, Yue-Jun ; Yang, Bin-Sheng ; Liang, Ai-Hua</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c425t-91c6edb523db20ca60ea9837545004aa847980721bd82d8fde0a2bd40b6b529e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Applied Microbiology</topic><topic>Bacillus subtilis</topic><topic>binding sites</topic><topic>Biomedical and Life Sciences</topic><topic>calcium</topic><topic>enzyme activity</topic><topic>Escherichia coli</topic><topic>fluorescence</topic><topic>genes</topic><topic>ions</topic><topic>Life Sciences</topic><topic>Medical Microbiology</topic><topic>melting point</topic><topic>Microbial Ecology</topic><topic>Microbial Genetics and Genomics</topic><topic>Microbiology</topic><topic>molecular weight</topic><topic>Mycology</topic><topic>Original Article</topic><topic>phytases</topic><topic>polyacrylamide gel electrophoresis</topic><topic>rhizosphere</topic><topic>signal peptide</topic><topic>soil</topic><topic>soybeans</topic><topic>temperature</topic><topic>terbium</topic><topic>thermal stability</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yao, Ming-Ze</creatorcontrib><creatorcontrib>Lu, Wen-Liang</creatorcontrib><creatorcontrib>Chen, Ting-Gui</creatorcontrib><creatorcontrib>Wang, Wei</creatorcontrib><creatorcontrib>Fu, Yue-Jun</creatorcontrib><creatorcontrib>Yang, Bin-Sheng</creatorcontrib><creatorcontrib>Liang, Ai-Hua</creatorcontrib><collection>AGRIS</collection><collection>CrossRef</collection><jtitle>Annals of microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yao, Ming-Ze</au><au>Lu, Wen-Liang</au><au>Chen, Ting-Gui</au><au>Wang, Wei</au><au>Fu, Yue-Jun</au><au>Yang, Bin-Sheng</au><au>Liang, Ai-Hua</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Effect of metals ions on thermostable alkaline phytase from Bacillus subtilis YCJS isolated from soybean rhizosphere soil</atitle><jtitle>Annals of microbiology</jtitle><stitle>Ann Microbiol</stitle><date>2014</date><risdate>2014</risdate><volume>64</volume><issue>3</issue><spage>1123</spage><epage>1131</epage><pages>1123-1131</pages><issn>1590-4261</issn><eissn>1869-2044</eissn><abstract>A Bacillus sp.YCJS strain showing phytase activity was isolated, and the phytase-encoding gene was cloned and expressed in Escherichia coli. The 1,149-bp full-length gene encoded a 26-residue putative signal peptide and a 356-residue mature protein. The molecular weight was estimated to be 47.5 kDa by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. The purified recombinant enzyme phy(ycE) from E. coli exhibited a specific activity of 14 U mg⁻¹protein. The optimum pH and temperature were 6.0 and 50 °C, respectively. The thermal stability of phy(ycE) was drastically improved in the presence of calcium ions (Ca²⁺). Fluorescence analysis results indicated that compared with phy(ycE) without added Ca²⁺, phy(ycE) in the presence of Ca²⁺was more stable and the melting temperature improved from 47.8 to 62.4 °C. Circular dichroism spectrometric analysis revealed that the loss of enzymatic activity was most likely due to a conformational change, as the circular dichroism spectra of the holoenzyme and metal-depleted enzyme were significantly different. Compared with the Ca²⁺-reactivated enzyme, the La³⁺-reactivated enzyme did not undergo a significant recovery with respect to its conformation. The aromatic-sensitized terbium (Tb³⁺) fluorescence results indicated that five Tb³⁺could bind to each molecule of phy(ycE) and that there were two high-affinity and three low-affinity binding sites.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer-Verlag</pub><doi>10.1007/s13213-013-0751-5</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Applied Microbiology Bacillus subtilis binding sites Biomedical and Life Sciences calcium enzyme activity Escherichia coli fluorescence genes ions Life Sciences Medical Microbiology melting point Microbial Ecology Microbial Genetics and Genomics Microbiology molecular weight Mycology Original Article phytases polyacrylamide gel electrophoresis rhizosphere signal peptide soil soybeans temperature terbium thermal stability |
title | Effect of metals ions on thermostable alkaline phytase from Bacillus subtilis YCJS isolated from soybean rhizosphere soil |
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