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Microbial mechanisms underlying active organic carbon pool increases via rhizodeposition by Moso bamboo under in situ crown 13CO2 enrichment

Plant rhizodeposition strongly mediates plant-soil-microbe interactions and impacts the soil active organic carbon (C) pool. However, the mechanisms by which rhizodeposition affects the modulation of soil active organic C pool remain poorly understood. In this study, we investigated the effects of r...

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Published in:Applied soil ecology : a section of Agriculture, ecosystems & environment ecosystems & environment, 2024-12, Vol.204, p.105756, Article 105756
Main Authors: Shi, Man, Chen, Hang, Zhang, Junbo, Chen, Zhenxiong, Wang, Zhikang, Cao, Tingting, Li, Quan, Song, Xinzhang
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Chen, Hang
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Li, Quan
Song, Xinzhang
description Plant rhizodeposition strongly mediates plant-soil-microbe interactions and impacts the soil active organic carbon (C) pool. However, the mechanisms by which rhizodeposition affects the modulation of soil active organic C pool remain poorly understood. In this study, we investigated the effects of rhizodeposition on active organic C pool and microbial communities in Moso bamboo (Phyllostachys edulis), a clonal plant with rhizome-connected mother and offspring ramets. The crown of the mother ramet was enriched with 13CO2 to trace rhizodeposition and assess changes in soil organic C pool and the microbial community across different root systems (culm roots and rhizome roots) during key growth stages (early, peak, branching, and leafing). Our results showed that crown CO2 enrichment increased δ13C and the contents of microbial biomass C, dissolved organic C, and labile organic C (by 22.08 % to 43.67 %) in the rhizosphere, which significantly altered the bacterial community composition. Under crown CO2 enrichment, the abundance of bacterial taxa and genes associated with recalcitrant C decomposition decreased by 29.08 %–77.38 % and 30.75 %–56.85 %, respectively; while taxa and genes related to CO2 fixation increased by 51.22 %–267.00 % and 92.52 %–331.46 %, respectively. These microbial shifts contributed to an increase in the soil active organic C pool. In addition, the growth stage, rather than the root system, had a greater influence on rhizodeposition, with higher δ13C observed during the early and leafing stages compared to the peak and branching stages. In conclusion, our findings suggest that increases in the active organic C pool were primarily driven by enhanced C rhizodeposition, the stimulation of microbes involved in CO2 fixation, and the suppression of bacteria involved in recalcitrant C decomposition, while being highly dependent on the growth stage. This study provides valuable insights into the interactions between plant rhizodeposition, microbial functions, and soil active organic C dynamics. [Display omitted] •Rhizodeposition differed among four growth stages of Moso bamboo.•δ13C and active organic C fractions showed no difference between various root systems.•Enhanced rhizodeposition, CO2 fixation and reduced C degradation changed soil C pool.•Thermoplasmatota matters most for variations in active organic C components.
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However, the mechanisms by which rhizodeposition affects the modulation of soil active organic C pool remain poorly understood. In this study, we investigated the effects of rhizodeposition on active organic C pool and microbial communities in Moso bamboo (Phyllostachys edulis), a clonal plant with rhizome-connected mother and offspring ramets. The crown of the mother ramet was enriched with 13CO2 to trace rhizodeposition and assess changes in soil organic C pool and the microbial community across different root systems (culm roots and rhizome roots) during key growth stages (early, peak, branching, and leafing). Our results showed that crown CO2 enrichment increased δ13C and the contents of microbial biomass C, dissolved organic C, and labile organic C (by 22.08 % to 43.67 %) in the rhizosphere, which significantly altered the bacterial community composition. Under crown CO2 enrichment, the abundance of bacterial taxa and genes associated with recalcitrant C decomposition decreased by 29.08 %–77.38 % and 30.75 %–56.85 %, respectively; while taxa and genes related to CO2 fixation increased by 51.22 %–267.00 % and 92.52 %–331.46 %, respectively. These microbial shifts contributed to an increase in the soil active organic C pool. In addition, the growth stage, rather than the root system, had a greater influence on rhizodeposition, with higher δ13C observed during the early and leafing stages compared to the peak and branching stages. In conclusion, our findings suggest that increases in the active organic C pool were primarily driven by enhanced C rhizodeposition, the stimulation of microbes involved in CO2 fixation, and the suppression of bacteria involved in recalcitrant C decomposition, while being highly dependent on the growth stage. This study provides valuable insights into the interactions between plant rhizodeposition, microbial functions, and soil active organic C dynamics. [Display omitted] •Rhizodeposition differed among four growth stages of Moso bamboo.•δ13C and active organic C fractions showed no difference between various root systems.•Enhanced rhizodeposition, CO2 fixation and reduced C degradation changed soil C pool.•Thermoplasmatota matters most for variations in active organic C components.</description><identifier>ISSN: 0929-1393</identifier><identifier>DOI: 10.1016/j.apsoil.2024.105756</identifier><language>eng</language><publisher>Elsevier B.V</publisher><subject>bacterial communities ; C cycle ; carbon dioxide ; carbon sinks ; clones ; community structure ; Crown 13CO2 enrichment ; culms ; developmental stages ; microbial biomass ; Microbial function ; Phyllostachys edulis ; progeny ; Rhizodeposition ; rhizomes ; rhizosphere ; root systems ; soil ; soil organic carbon</subject><ispartof>Applied soil ecology : a section of Agriculture, ecosystems &amp; environment, 2024-12, Vol.204, p.105756, Article 105756</ispartof><rights>2024 Elsevier B.V.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c218t-7e1c8edf163cda0bfbe48cc089a98c706d6e9aa496bf2bb5931a8941af814e5a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,777,781,27905,27906</link.rule.ids></links><search><creatorcontrib>Shi, Man</creatorcontrib><creatorcontrib>Chen, Hang</creatorcontrib><creatorcontrib>Zhang, Junbo</creatorcontrib><creatorcontrib>Chen, Zhenxiong</creatorcontrib><creatorcontrib>Wang, Zhikang</creatorcontrib><creatorcontrib>Cao, Tingting</creatorcontrib><creatorcontrib>Li, Quan</creatorcontrib><creatorcontrib>Song, Xinzhang</creatorcontrib><title>Microbial mechanisms underlying active organic carbon pool increases via rhizodeposition by Moso bamboo under in situ crown 13CO2 enrichment</title><title>Applied soil ecology : a section of Agriculture, ecosystems &amp; environment</title><description>Plant rhizodeposition strongly mediates plant-soil-microbe interactions and impacts the soil active organic carbon (C) pool. However, the mechanisms by which rhizodeposition affects the modulation of soil active organic C pool remain poorly understood. In this study, we investigated the effects of rhizodeposition on active organic C pool and microbial communities in Moso bamboo (Phyllostachys edulis), a clonal plant with rhizome-connected mother and offspring ramets. The crown of the mother ramet was enriched with 13CO2 to trace rhizodeposition and assess changes in soil organic C pool and the microbial community across different root systems (culm roots and rhizome roots) during key growth stages (early, peak, branching, and leafing). Our results showed that crown CO2 enrichment increased δ13C and the contents of microbial biomass C, dissolved organic C, and labile organic C (by 22.08 % to 43.67 %) in the rhizosphere, which significantly altered the bacterial community composition. Under crown CO2 enrichment, the abundance of bacterial taxa and genes associated with recalcitrant C decomposition decreased by 29.08 %–77.38 % and 30.75 %–56.85 %, respectively; while taxa and genes related to CO2 fixation increased by 51.22 %–267.00 % and 92.52 %–331.46 %, respectively. These microbial shifts contributed to an increase in the soil active organic C pool. In addition, the growth stage, rather than the root system, had a greater influence on rhizodeposition, with higher δ13C observed during the early and leafing stages compared to the peak and branching stages. In conclusion, our findings suggest that increases in the active organic C pool were primarily driven by enhanced C rhizodeposition, the stimulation of microbes involved in CO2 fixation, and the suppression of bacteria involved in recalcitrant C decomposition, while being highly dependent on the growth stage. This study provides valuable insights into the interactions between plant rhizodeposition, microbial functions, and soil active organic C dynamics. [Display omitted] •Rhizodeposition differed among four growth stages of Moso bamboo.•δ13C and active organic C fractions showed no difference between various root systems.•Enhanced rhizodeposition, CO2 fixation and reduced C degradation changed soil C pool.•Thermoplasmatota matters most for variations in active organic C components.</description><subject>bacterial communities</subject><subject>C cycle</subject><subject>carbon dioxide</subject><subject>carbon sinks</subject><subject>clones</subject><subject>community structure</subject><subject>Crown 13CO2 enrichment</subject><subject>culms</subject><subject>developmental stages</subject><subject>microbial biomass</subject><subject>Microbial function</subject><subject>Phyllostachys edulis</subject><subject>progeny</subject><subject>Rhizodeposition</subject><subject>rhizomes</subject><subject>rhizosphere</subject><subject>root systems</subject><subject>soil</subject><subject>soil organic carbon</subject><issn>0929-1393</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNp9kM9u1EAMxnMAiVJ4Aw5z7GWX-ZNkMxcktAJaqVUvcB55HKfrVTITZrKLlmfoQzNVeuZkyf6-z_avqj4puVVStZ-PW5hz5HGrpa5Lq9k17ZvqSlptN8pY8656n_NRStnozlxVzw-MKXqGUUyEBwicpyxOoac0Xjg8CcCFzyRieiozFAjJxyDmGEfBARNBpizODCId-G_saY6ZFy4SfxEPMUfhYfIxrpHFIsr4JMrOP0Eos3_UgkJiPEwUlg_V2wHGTB9f63X16_u3n_vbzf3jj7v91_sNatUtmx0p7KgfVGuwB-kHT3WHKDsLtsOdbPuWLEBtWz9o7xtrFHS2VjB0qqYGzHV1s-bOKf4-UV7cxBlpHCFQPGVnVFPr2rRSF2m9SsvFOSca3Jx4gnRxSroX4O7oVuDuBbhbgRfbl9VG5Y0zU3IZmQJSz4lwcX3k_wf8AwV8kT8</recordid><startdate>202412</startdate><enddate>202412</enddate><creator>Shi, Man</creator><creator>Chen, Hang</creator><creator>Zhang, Junbo</creator><creator>Chen, Zhenxiong</creator><creator>Wang, Zhikang</creator><creator>Cao, Tingting</creator><creator>Li, Quan</creator><creator>Song, Xinzhang</creator><general>Elsevier B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7S9</scope><scope>L.6</scope></search><sort><creationdate>202412</creationdate><title>Microbial mechanisms underlying active organic carbon pool increases via rhizodeposition by Moso bamboo under in situ crown 13CO2 enrichment</title><author>Shi, Man ; Chen, Hang ; Zhang, Junbo ; Chen, Zhenxiong ; Wang, Zhikang ; Cao, Tingting ; Li, Quan ; Song, Xinzhang</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c218t-7e1c8edf163cda0bfbe48cc089a98c706d6e9aa496bf2bb5931a8941af814e5a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>bacterial communities</topic><topic>C cycle</topic><topic>carbon dioxide</topic><topic>carbon sinks</topic><topic>clones</topic><topic>community structure</topic><topic>Crown 13CO2 enrichment</topic><topic>culms</topic><topic>developmental stages</topic><topic>microbial biomass</topic><topic>Microbial function</topic><topic>Phyllostachys edulis</topic><topic>progeny</topic><topic>Rhizodeposition</topic><topic>rhizomes</topic><topic>rhizosphere</topic><topic>root systems</topic><topic>soil</topic><topic>soil organic carbon</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Shi, Man</creatorcontrib><creatorcontrib>Chen, Hang</creatorcontrib><creatorcontrib>Zhang, Junbo</creatorcontrib><creatorcontrib>Chen, Zhenxiong</creatorcontrib><creatorcontrib>Wang, Zhikang</creatorcontrib><creatorcontrib>Cao, Tingting</creatorcontrib><creatorcontrib>Li, Quan</creatorcontrib><creatorcontrib>Song, Xinzhang</creatorcontrib><collection>CrossRef</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><jtitle>Applied soil ecology : a section of Agriculture, ecosystems &amp; environment</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Shi, Man</au><au>Chen, Hang</au><au>Zhang, Junbo</au><au>Chen, Zhenxiong</au><au>Wang, Zhikang</au><au>Cao, Tingting</au><au>Li, Quan</au><au>Song, Xinzhang</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Microbial mechanisms underlying active organic carbon pool increases via rhizodeposition by Moso bamboo under in situ crown 13CO2 enrichment</atitle><jtitle>Applied soil ecology : a section of Agriculture, ecosystems &amp; environment</jtitle><date>2024-12</date><risdate>2024</risdate><volume>204</volume><spage>105756</spage><pages>105756-</pages><artnum>105756</artnum><issn>0929-1393</issn><abstract>Plant rhizodeposition strongly mediates plant-soil-microbe interactions and impacts the soil active organic carbon (C) pool. However, the mechanisms by which rhizodeposition affects the modulation of soil active organic C pool remain poorly understood. In this study, we investigated the effects of rhizodeposition on active organic C pool and microbial communities in Moso bamboo (Phyllostachys edulis), a clonal plant with rhizome-connected mother and offspring ramets. The crown of the mother ramet was enriched with 13CO2 to trace rhizodeposition and assess changes in soil organic C pool and the microbial community across different root systems (culm roots and rhizome roots) during key growth stages (early, peak, branching, and leafing). Our results showed that crown CO2 enrichment increased δ13C and the contents of microbial biomass C, dissolved organic C, and labile organic C (by 22.08 % to 43.67 %) in the rhizosphere, which significantly altered the bacterial community composition. Under crown CO2 enrichment, the abundance of bacterial taxa and genes associated with recalcitrant C decomposition decreased by 29.08 %–77.38 % and 30.75 %–56.85 %, respectively; while taxa and genes related to CO2 fixation increased by 51.22 %–267.00 % and 92.52 %–331.46 %, respectively. These microbial shifts contributed to an increase in the soil active organic C pool. In addition, the growth stage, rather than the root system, had a greater influence on rhizodeposition, with higher δ13C observed during the early and leafing stages compared to the peak and branching stages. In conclusion, our findings suggest that increases in the active organic C pool were primarily driven by enhanced C rhizodeposition, the stimulation of microbes involved in CO2 fixation, and the suppression of bacteria involved in recalcitrant C decomposition, while being highly dependent on the growth stage. This study provides valuable insights into the interactions between plant rhizodeposition, microbial functions, and soil active organic C dynamics. [Display omitted] •Rhizodeposition differed among four growth stages of Moso bamboo.•δ13C and active organic C fractions showed no difference between various root systems.•Enhanced rhizodeposition, CO2 fixation and reduced C degradation changed soil C pool.•Thermoplasmatota matters most for variations in active organic C components.</abstract><pub>Elsevier B.V</pub><doi>10.1016/j.apsoil.2024.105756</doi></addata></record>
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subjects bacterial communities
C cycle
carbon dioxide
carbon sinks
clones
community structure
Crown 13CO2 enrichment
culms
developmental stages
microbial biomass
Microbial function
Phyllostachys edulis
progeny
Rhizodeposition
rhizomes
rhizosphere
root systems
soil
soil organic carbon
title Microbial mechanisms underlying active organic carbon pool increases via rhizodeposition by Moso bamboo under in situ crown 13CO2 enrichment
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