Loading…

Soil prokaryotic community structure and co-occurrence patterns on the fragmented Chinese Loess Plateau: Effects of topographic units of a soil eroding catena

•Reassembly of the soil environmental characteristics along the soil-eroding catena altered prokaryotic communities.•Less extensive prokaryotic interactions and lower community stability potential in the depositional zone.•The higher SOC increased copiotrophic group abundance in the depositional zon...

Full description

Saved in:
Bibliographic Details
Published in:Catena (Giessen) 2021-03, Vol.198, p.105035, Article 105035
Main Authors: Wang, Rui, Hu, Yaxian, Khan, Asif, Du, Lanlan, Wang, Ying, Hou, Fangbin, Guo, Shengli
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-a362t-693ef92c9433175348db29791509c7d45a36c547070cead16c9fccd777f5f7173
cites cdi_FETCH-LOGICAL-a362t-693ef92c9433175348db29791509c7d45a36c547070cead16c9fccd777f5f7173
container_end_page
container_issue
container_start_page 105035
container_title Catena (Giessen)
container_volume 198
creator Wang, Rui
Hu, Yaxian
Khan, Asif
Du, Lanlan
Wang, Ying
Hou, Fangbin
Guo, Shengli
description •Reassembly of the soil environmental characteristics along the soil-eroding catena altered prokaryotic communities.•Less extensive prokaryotic interactions and lower community stability potential in the depositional zone.•The higher SOC increased copiotrophic group abundance in the depositional zone. Soil prokaryotes composition and diversity are the key to uncovering the mechanisms that drive variations in soil biogeochemical processes. Soil erosion is a primary factor that affects the spatial distribution of the soil prokaryotic community, but how soil prokaryotes in soil-eroding catena respond to environmental factors related to topography remains largely unclear. In this study, topsoils were sampled from three typical erosion geomorphic units (autonomous, transitional and depositional zones) in 2018 to identify the soil prokaryotic community and interactions among the species on the Chinese Loess Plateau. The alpha-diversity was greater but the beta-diversity was lower in the autonomous and transitional zones than in the depositional zone. Gammaproteobacteria and Bacteroidetes were 73% and 68% lower in the autonomous and transitional zones than in the depositional zone. In addition, Deltaproteobacteria, Acidobacteria, Firmicutes, Actinobacteria, Chloroflexi, Gemmatimonadetes and Nitrospirae were significantly higher in the autonomous and transitional zones. A less clustered network and fewer co-occurrences within the prokaryotic community and functional groups of processes were found in the depositional zone than in the autonomous and transitional zones. The alpha-diversity index was significantly negatively correlated with clay particles, soil water content, soil organic carbon (SOC), and ratio of SOC and nitrogen (C/N) but positively correlated with total nitrogen (TN). The higher relative abundances of copiotrophic groups (including Gammaproteobacteria, Bacteroidetes, etc.) in the depositional zone was mainly due to the increased SOC caused by the deposition of SOC-rich clay. Reassembly of the soil physico-chemistry characteristics among the topographic units significantly altered the soil prokaryotic community along the soil-eroding catena.
doi_str_mv 10.1016/j.catena.2020.105035
format article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_crossref_primary_10_1016_j_catena_2020_105035</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S0341816220305853</els_id><sourcerecordid>2551910325</sourcerecordid><originalsourceid>FETCH-LOGICAL-a362t-693ef92c9433175348db29791509c7d45a36c547070cead16c9fccd777f5f7173</originalsourceid><addsrcrecordid>eNp9UU1v1DAUtBBILC3_gIOPXLL4I44TDkho1UKllUBqe7aM_bzrJbGD7SD1z_BbcQjnnp40mnlv3gxC7yjZU0K7D5e90QWC3jPCVkgQLl6gHe0la7q-ly_RjvCWNj3t2Gv0JucLIaSVgu7Qn_voRzyn-FOnp1i8wSZO0xJ8ecK5pMWUJQHWwVa8icYsKUEwgGddCqSQcQy4nAG7pE8ThAIWH84-QAZ8jJAz_j5Wa3r5iG-cA1OqwOES53hKej7Xc-upf6DGebUCKVofTnj76Bq9cnrM8Pb_vEKPtzcPh6_N8duXu8PnY6N5x0rTDRzcwMzQck6l4G1vf7BBDlSQwUjbikozopVEEgPa0s4MzhgrpXTCSSr5FXq_7a1J_FogFzX5bGAcdYC4ZMWEoAMlnIlKbTeqSTHnBE7NyU81PUWJWutQF7WZV2sdaqujyj5tMqhv_PaQVDZ-jdL6VHNRNvrnF_wFLUSYBw</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2551910325</pqid></control><display><type>article</type><title>Soil prokaryotic community structure and co-occurrence patterns on the fragmented Chinese Loess Plateau: Effects of topographic units of a soil eroding catena</title><source>ScienceDirect Freedom Collection</source><creator>Wang, Rui ; Hu, Yaxian ; Khan, Asif ; Du, Lanlan ; Wang, Ying ; Hou, Fangbin ; Guo, Shengli</creator><creatorcontrib>Wang, Rui ; Hu, Yaxian ; Khan, Asif ; Du, Lanlan ; Wang, Ying ; Hou, Fangbin ; Guo, Shengli</creatorcontrib><description>•Reassembly of the soil environmental characteristics along the soil-eroding catena altered prokaryotic communities.•Less extensive prokaryotic interactions and lower community stability potential in the depositional zone.•The higher SOC increased copiotrophic group abundance in the depositional zone. Soil prokaryotes composition and diversity are the key to uncovering the mechanisms that drive variations in soil biogeochemical processes. Soil erosion is a primary factor that affects the spatial distribution of the soil prokaryotic community, but how soil prokaryotes in soil-eroding catena respond to environmental factors related to topography remains largely unclear. In this study, topsoils were sampled from three typical erosion geomorphic units (autonomous, transitional and depositional zones) in 2018 to identify the soil prokaryotic community and interactions among the species on the Chinese Loess Plateau. The alpha-diversity was greater but the beta-diversity was lower in the autonomous and transitional zones than in the depositional zone. Gammaproteobacteria and Bacteroidetes were 73% and 68% lower in the autonomous and transitional zones than in the depositional zone. In addition, Deltaproteobacteria, Acidobacteria, Firmicutes, Actinobacteria, Chloroflexi, Gemmatimonadetes and Nitrospirae were significantly higher in the autonomous and transitional zones. A less clustered network and fewer co-occurrences within the prokaryotic community and functional groups of processes were found in the depositional zone than in the autonomous and transitional zones. The alpha-diversity index was significantly negatively correlated with clay particles, soil water content, soil organic carbon (SOC), and ratio of SOC and nitrogen (C/N) but positively correlated with total nitrogen (TN). The higher relative abundances of copiotrophic groups (including Gammaproteobacteria, Bacteroidetes, etc.) in the depositional zone was mainly due to the increased SOC caused by the deposition of SOC-rich clay. Reassembly of the soil physico-chemistry characteristics among the topographic units significantly altered the soil prokaryotic community along the soil-eroding catena.</description><identifier>ISSN: 0341-8162</identifier><identifier>EISSN: 1872-6887</identifier><identifier>DOI: 10.1016/j.catena.2020.105035</identifier><language>eng</language><publisher>Elsevier B.V</publisher><subject>Acidobacteria ; Actinobacteria ; Bacteroidetes ; catenas ; China ; Chloroflexi ; clay ; Co-occurrences ; community structure ; delta-Proteobacteria ; eutrophication ; Firmicutes ; gamma-Proteobacteria ; Gemmatimonadetes ; nitrogen ; Nitrospirae ; Nutrient content ; prokaryotic cells ; soil erosion ; soil organic carbon ; Soil prokaryotes diversity ; Soil prokaryotes function ; soil water content ; Soil-eroding catena ; species diversity ; topography ; total nitrogen</subject><ispartof>Catena (Giessen), 2021-03, Vol.198, p.105035, Article 105035</ispartof><rights>2020 Elsevier B.V.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a362t-693ef92c9433175348db29791509c7d45a36c547070cead16c9fccd777f5f7173</citedby><cites>FETCH-LOGICAL-a362t-693ef92c9433175348db29791509c7d45a36c547070cead16c9fccd777f5f7173</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27903,27904</link.rule.ids></links><search><creatorcontrib>Wang, Rui</creatorcontrib><creatorcontrib>Hu, Yaxian</creatorcontrib><creatorcontrib>Khan, Asif</creatorcontrib><creatorcontrib>Du, Lanlan</creatorcontrib><creatorcontrib>Wang, Ying</creatorcontrib><creatorcontrib>Hou, Fangbin</creatorcontrib><creatorcontrib>Guo, Shengli</creatorcontrib><title>Soil prokaryotic community structure and co-occurrence patterns on the fragmented Chinese Loess Plateau: Effects of topographic units of a soil eroding catena</title><title>Catena (Giessen)</title><description>•Reassembly of the soil environmental characteristics along the soil-eroding catena altered prokaryotic communities.•Less extensive prokaryotic interactions and lower community stability potential in the depositional zone.•The higher SOC increased copiotrophic group abundance in the depositional zone. Soil prokaryotes composition and diversity are the key to uncovering the mechanisms that drive variations in soil biogeochemical processes. Soil erosion is a primary factor that affects the spatial distribution of the soil prokaryotic community, but how soil prokaryotes in soil-eroding catena respond to environmental factors related to topography remains largely unclear. In this study, topsoils were sampled from three typical erosion geomorphic units (autonomous, transitional and depositional zones) in 2018 to identify the soil prokaryotic community and interactions among the species on the Chinese Loess Plateau. The alpha-diversity was greater but the beta-diversity was lower in the autonomous and transitional zones than in the depositional zone. Gammaproteobacteria and Bacteroidetes were 73% and 68% lower in the autonomous and transitional zones than in the depositional zone. In addition, Deltaproteobacteria, Acidobacteria, Firmicutes, Actinobacteria, Chloroflexi, Gemmatimonadetes and Nitrospirae were significantly higher in the autonomous and transitional zones. A less clustered network and fewer co-occurrences within the prokaryotic community and functional groups of processes were found in the depositional zone than in the autonomous and transitional zones. The alpha-diversity index was significantly negatively correlated with clay particles, soil water content, soil organic carbon (SOC), and ratio of SOC and nitrogen (C/N) but positively correlated with total nitrogen (TN). The higher relative abundances of copiotrophic groups (including Gammaproteobacteria, Bacteroidetes, etc.) in the depositional zone was mainly due to the increased SOC caused by the deposition of SOC-rich clay. Reassembly of the soil physico-chemistry characteristics among the topographic units significantly altered the soil prokaryotic community along the soil-eroding catena.</description><subject>Acidobacteria</subject><subject>Actinobacteria</subject><subject>Bacteroidetes</subject><subject>catenas</subject><subject>China</subject><subject>Chloroflexi</subject><subject>clay</subject><subject>Co-occurrences</subject><subject>community structure</subject><subject>delta-Proteobacteria</subject><subject>eutrophication</subject><subject>Firmicutes</subject><subject>gamma-Proteobacteria</subject><subject>Gemmatimonadetes</subject><subject>nitrogen</subject><subject>Nitrospirae</subject><subject>Nutrient content</subject><subject>prokaryotic cells</subject><subject>soil erosion</subject><subject>soil organic carbon</subject><subject>Soil prokaryotes diversity</subject><subject>Soil prokaryotes function</subject><subject>soil water content</subject><subject>Soil-eroding catena</subject><subject>species diversity</subject><subject>topography</subject><subject>total nitrogen</subject><issn>0341-8162</issn><issn>1872-6887</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNp9UU1v1DAUtBBILC3_gIOPXLL4I44TDkho1UKllUBqe7aM_bzrJbGD7SD1z_BbcQjnnp40mnlv3gxC7yjZU0K7D5e90QWC3jPCVkgQLl6gHe0la7q-ly_RjvCWNj3t2Gv0JucLIaSVgu7Qn_voRzyn-FOnp1i8wSZO0xJ8ecK5pMWUJQHWwVa8icYsKUEwgGddCqSQcQy4nAG7pE8ThAIWH84-QAZ8jJAz_j5Wa3r5iG-cA1OqwOES53hKej7Xc-upf6DGebUCKVofTnj76Bq9cnrM8Pb_vEKPtzcPh6_N8duXu8PnY6N5x0rTDRzcwMzQck6l4G1vf7BBDlSQwUjbikozopVEEgPa0s4MzhgrpXTCSSr5FXq_7a1J_FogFzX5bGAcdYC4ZMWEoAMlnIlKbTeqSTHnBE7NyU81PUWJWutQF7WZV2sdaqujyj5tMqhv_PaQVDZ-jdL6VHNRNvrnF_wFLUSYBw</recordid><startdate>202103</startdate><enddate>202103</enddate><creator>Wang, Rui</creator><creator>Hu, Yaxian</creator><creator>Khan, Asif</creator><creator>Du, Lanlan</creator><creator>Wang, Ying</creator><creator>Hou, Fangbin</creator><creator>Guo, Shengli</creator><general>Elsevier B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7S9</scope><scope>L.6</scope></search><sort><creationdate>202103</creationdate><title>Soil prokaryotic community structure and co-occurrence patterns on the fragmented Chinese Loess Plateau: Effects of topographic units of a soil eroding catena</title><author>Wang, Rui ; Hu, Yaxian ; Khan, Asif ; Du, Lanlan ; Wang, Ying ; Hou, Fangbin ; Guo, Shengli</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a362t-693ef92c9433175348db29791509c7d45a36c547070cead16c9fccd777f5f7173</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Acidobacteria</topic><topic>Actinobacteria</topic><topic>Bacteroidetes</topic><topic>catenas</topic><topic>China</topic><topic>Chloroflexi</topic><topic>clay</topic><topic>Co-occurrences</topic><topic>community structure</topic><topic>delta-Proteobacteria</topic><topic>eutrophication</topic><topic>Firmicutes</topic><topic>gamma-Proteobacteria</topic><topic>Gemmatimonadetes</topic><topic>nitrogen</topic><topic>Nitrospirae</topic><topic>Nutrient content</topic><topic>prokaryotic cells</topic><topic>soil erosion</topic><topic>soil organic carbon</topic><topic>Soil prokaryotes diversity</topic><topic>Soil prokaryotes function</topic><topic>soil water content</topic><topic>Soil-eroding catena</topic><topic>species diversity</topic><topic>topography</topic><topic>total nitrogen</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wang, Rui</creatorcontrib><creatorcontrib>Hu, Yaxian</creatorcontrib><creatorcontrib>Khan, Asif</creatorcontrib><creatorcontrib>Du, Lanlan</creatorcontrib><creatorcontrib>Wang, Ying</creatorcontrib><creatorcontrib>Hou, Fangbin</creatorcontrib><creatorcontrib>Guo, Shengli</creatorcontrib><collection>CrossRef</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><jtitle>Catena (Giessen)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wang, Rui</au><au>Hu, Yaxian</au><au>Khan, Asif</au><au>Du, Lanlan</au><au>Wang, Ying</au><au>Hou, Fangbin</au><au>Guo, Shengli</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Soil prokaryotic community structure and co-occurrence patterns on the fragmented Chinese Loess Plateau: Effects of topographic units of a soil eroding catena</atitle><jtitle>Catena (Giessen)</jtitle><date>2021-03</date><risdate>2021</risdate><volume>198</volume><spage>105035</spage><pages>105035-</pages><artnum>105035</artnum><issn>0341-8162</issn><eissn>1872-6887</eissn><abstract>•Reassembly of the soil environmental characteristics along the soil-eroding catena altered prokaryotic communities.•Less extensive prokaryotic interactions and lower community stability potential in the depositional zone.•The higher SOC increased copiotrophic group abundance in the depositional zone. Soil prokaryotes composition and diversity are the key to uncovering the mechanisms that drive variations in soil biogeochemical processes. Soil erosion is a primary factor that affects the spatial distribution of the soil prokaryotic community, but how soil prokaryotes in soil-eroding catena respond to environmental factors related to topography remains largely unclear. In this study, topsoils were sampled from three typical erosion geomorphic units (autonomous, transitional and depositional zones) in 2018 to identify the soil prokaryotic community and interactions among the species on the Chinese Loess Plateau. The alpha-diversity was greater but the beta-diversity was lower in the autonomous and transitional zones than in the depositional zone. Gammaproteobacteria and Bacteroidetes were 73% and 68% lower in the autonomous and transitional zones than in the depositional zone. In addition, Deltaproteobacteria, Acidobacteria, Firmicutes, Actinobacteria, Chloroflexi, Gemmatimonadetes and Nitrospirae were significantly higher in the autonomous and transitional zones. A less clustered network and fewer co-occurrences within the prokaryotic community and functional groups of processes were found in the depositional zone than in the autonomous and transitional zones. The alpha-diversity index was significantly negatively correlated with clay particles, soil water content, soil organic carbon (SOC), and ratio of SOC and nitrogen (C/N) but positively correlated with total nitrogen (TN). The higher relative abundances of copiotrophic groups (including Gammaproteobacteria, Bacteroidetes, etc.) in the depositional zone was mainly due to the increased SOC caused by the deposition of SOC-rich clay. Reassembly of the soil physico-chemistry characteristics among the topographic units significantly altered the soil prokaryotic community along the soil-eroding catena.</abstract><pub>Elsevier B.V</pub><doi>10.1016/j.catena.2020.105035</doi></addata></record>
fulltext fulltext
identifier ISSN: 0341-8162
ispartof Catena (Giessen), 2021-03, Vol.198, p.105035, Article 105035
issn 0341-8162
1872-6887
language eng
recordid cdi_crossref_primary_10_1016_j_catena_2020_105035
source ScienceDirect Freedom Collection
subjects Acidobacteria
Actinobacteria
Bacteroidetes
catenas
China
Chloroflexi
clay
Co-occurrences
community structure
delta-Proteobacteria
eutrophication
Firmicutes
gamma-Proteobacteria
Gemmatimonadetes
nitrogen
Nitrospirae
Nutrient content
prokaryotic cells
soil erosion
soil organic carbon
Soil prokaryotes diversity
Soil prokaryotes function
soil water content
Soil-eroding catena
species diversity
topography
total nitrogen
title Soil prokaryotic community structure and co-occurrence patterns on the fragmented Chinese Loess Plateau: Effects of topographic units of a soil eroding catena
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-24T12%3A14%3A38IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Soil%20prokaryotic%20community%20structure%20and%20co-occurrence%20patterns%20on%20the%20fragmented%20Chinese%20Loess%20Plateau:%20Effects%20of%20topographic%20units%20of%20a%20soil%20eroding%20catena&rft.jtitle=Catena%20(Giessen)&rft.au=Wang,%20Rui&rft.date=2021-03&rft.volume=198&rft.spage=105035&rft.pages=105035-&rft.artnum=105035&rft.issn=0341-8162&rft.eissn=1872-6887&rft_id=info:doi/10.1016/j.catena.2020.105035&rft_dat=%3Cproquest_cross%3E2551910325%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-a362t-693ef92c9433175348db29791509c7d45a36c547070cead16c9fccd777f5f7173%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=2551910325&rft_id=info:pmid/&rfr_iscdi=true