A Non-structural 1 Protein G53D Substitution Attenuates a Clinically Tested Live Dengue Vaccine

• Published in: Cell reports (Cambridge) 2020-05, Vol.31 (6), p.107617, Article 107617
• Main Authors: Choy, Milly M., Ng, Dorothy H.L., Siriphanitchakorn, Tanamas, Ng, Wy Ching, Sundstrom, Karin B., Tan, Hwee Cheng, Zhang, Summer L., Chan, Kitti W.K., Manuel, Menchie, Kini, R. Manjunatha, Chan, Kuan Rong, Vasudevan, Subhash G., Ooi, Eng Eong
• Format: Article
• Language: English
• Subjects: Aedes - virology; Aedes aegypti; Animals; Chlorocebus aethiops; Dengue; Dengue - virology; Dengue Vaccines - immunology; Dengue Vaccines - pharmacology; Dengue Virus - genetics; Dengue Virus - immunology; Endoplasmic Reticulum Stress; ER stress; Female; Glycosylation; HEK293 Cells; Humans; interferon; Membrane Proteins - metabolism; Mutagenesis, Site-Directed; Mutation; NS1; PDK53; plaque size; ribophorin 1; RPN1; vaccine; Vero Cells; Viral Nonstructural Proteins - genetics; Viral Nonstructural Proteins - immunology; Viral Nonstructural Proteins - metabolism
• ISSN: 2211-1247; 2211-1247
• DOI: 10.1016/j.celrep.2020.107617

The molecular basis of dengue virus (DENV) attenuation remains ambiguous and hampers a targeted approach to derive safe but nonetheless immunogenic live vaccine candidates. Here, we take advantage of DENV serotype 2 PDK53 vaccine strain, which recently and successfully completed a phase-3 clinical trial, to identify how this virus is attenuated compared to its wild-type parent, DENV2 16681. Site-directed mutagenesis on a 16681 infectious clone identifies a single G53D substitution in the non-structural 1 (NS1) protein that reduces 16681 infection and dissemination in both Aedes aegypti, as well as in mammalian cells to produce the characteristic phenotypes of PDK53. Mechanistically, NS1 G53D impairs the function of a known host factor, the endoplasmic reticulum (ER)-resident ribophorin 1 protein, to properly glycosylate NS1 and thus induce a host antiviral gene through ER stress responses. Our findings provide molecular insights on DENV attenuation on a clinically tested strain. [Display omitted] •G53D substitution in non-structural protein 1 (NS1) attenuates dengue virus (DENV)•NS1 G53D reduces DENV infection and spread in Aedes aegypti and mammalian cells•NS1 G53D impairs proper glycosylation of NS1 by RPN1•Mis-glycosylated NS1 induces host antiviral genes through ER stress responses Understanding the molecular basis of dengue virus (DENV) attenuation is important for designing more effective vaccines. Choy et al. identify the non-structural 1 (NS1) G53D substitution as a key single attenuating mutation of a clinically tested vaccine strain. Substitution of NS1 G53D impairs RPN1-dependent proper glycosylation of NS1 to induce ER stress and downstream antiviral responses.