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Insufficient description of dispersion in B3LYP and large basis set superposition errors in MP2 calculations can hide peptide conformers
B3LYP/6-31+G(d) and MP2/6-31+G(d) predict different structures for one Tyr–Gly conformer due to missing dispersion in B3LYP and large BSSE in MP2. B3LYP/6-31+G(d) and MP2/6-31+G(d) calculations predict markedly different structures for one Tyr–Gly conformer. Calculation of the energy profile for rot...
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Published in: | Chemical physics letters 2007-07, Vol.442 (1), p.42-46 |
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Main Authors: | , |
Format: | Article |
Language: | English |
Citations: | Items that this one cites Items that cite this one |
Online Access: | Get full text |
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Summary: | B3LYP/6-31+G(d) and MP2/6-31+G(d) predict different structures for one Tyr–Gly conformer due to missing dispersion in B3LYP and large BSSE in MP2.
B3LYP/6-31+G(d) and MP2/6-31+G(d) calculations predict markedly different structures for one Tyr–Gly conformer. Calculation of the energy profile for rotation around the glycine C
α–N bond reveals one minimum in the B3LYP profile (
ϕ
gly
=
180°) and two in the MP2 profile (∼75° and 280°). Large intramolecular BSSE values are responsible for masking the 180°-minimum in the MP2 profile: approximate elimination of BSSE in the MP2 calculations – by (1) correction using BSSE values from complexes of phenol and
N-formylglycine, (2) the application of local MP2, or (3) employing large basis sets (aug-cc-pVTZ/QZ) and density fitting – yields an unambiguous triple-well potential. |
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ISSN: | 0009-2614 1873-4448 |
DOI: | 10.1016/j.cplett.2007.05.072 |