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The aim of this study was evaluate of allele and haplotype frequencies of HLA-A, -B, -DRB1, -DQA1 and -DQB1 in a mixed population from Southern Brazil. Sample donors registered in the National Registry of Bone Marrow Donors (REDOME) were analyzed. Four hundred and seventy-three (67%) subjects were f...
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Published in: | Human immunology 2014-10, Vol.75, p.127-127 |
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Main Authors: | , , , , , , , |
Format: | Article |
Language: | English |
Subjects: | |
Online Access: | Get full text |
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Summary: | The aim of this study was evaluate of allele and haplotype frequencies of HLA-A, -B, -DRB1, -DQA1 and -DQB1 in a mixed population from Southern Brazil. Sample donors registered in the National Registry of Bone Marrow Donors (REDOME) were analyzed. Four hundred and seventy-three (67%) subjects were female while 231 (33%) were male. The average age was 33.63 years (SD = 9.37). Genotyping allelic groups of HLA-A , -B-DQA1 and DQB1 was performed by PCR-SSO with Luminex method (One Lambda®, CA, USA) and the HLA-DRB1 alleles was performed by PCR-SSOP HD (High Definition) methodology with Luminex (One Lambda®, CA , USA) in 704 individuals. The distribution of HLA alleles was in Hardy-Weinberg equilibrium. Twenty-two allelic groups were observed for HLA-A locus, the most frequent HLA-A∗ 02 (27.1%),∗ 03 (10.7%),∗ 24 (9.6%),∗ 01 (9.5%),∗ 68 (6.3%) and∗ 11 (5.4%), while for HLA-B locus with 34 allelic groups were the most frequent HLA-B∗ 35 (12.1 %),∗ 44 (10.2%),∗ 51 (8.5%),∗ 15 (7.5%),∗ 7 (7.3%) and∗ 18 (6.5%). The most common DRB1 alleles were: HLA-DRB1∗ 07:01 (13.2%),∗ 03:01 (9.1%),∗ 11:01 (8.4%),∗ 15:01 (6.1%)∗ 1:01 (5.92%) and∗ 13:01 (5.9%). For the loci HLA-DQA1 and HLA-DQB1: HLA-DQA1∗ 01:02 (16.8%),∗ 05:05 (15.8%)∗ 02:01 (13.1%), 05:01 (9.8%),∗ 01:01/04/05 (9.1%); HLA-DQB1∗ 03:01 (20.1%),∗ 05:01 (14.1%),∗ 02:02 (11.9%),∗ 02:01 and∗ 03:02 (9.74%). Four hundred HLA-A/B found possible haplotype, with HLA-A∗ 02/B∗ 51 (4.3%), A∗ 02/B∗ 15 (2.9%) and A∗ 01/B∗ 08 (2.9%) were the most frequent. We observed 2839 HLA-A/B/DRB1 possible haplotypes and the most common were HLA-A∗ 01/B∗ 08/DRB1∗ 03:01 (2.7%) and A∗ 29/B∗ 44/DRB1∗ 07:01 (1.9%). For HLA-DRB1/DQA1/DQB1 observed in 1369 possible haplotypes, the most frequent were HLA-DRB1∗ 03:01/DQA1∗ 05:01/DQB1∗ 02:01 (8.4%) and HLA-DRB1∗ 11:01/DQA1∗ 05:05/DQB1∗ 03:01 (5.7%), and the HLA-DQA1∗ 05:05/DQB1∗ 03:01 (14.9%) and HLA-DQA1∗ 02:01/DQB1∗ 02:02 (10.9%) were the most frequent. The results obtained for the haplotype extended HLA-A/B/DRB1/DQA1/DQB1 is given below: 15,006 possible haplotypes and HLA-A∗ 01/B∗ 08/DRB1∗ 03:01/DQA1∗ 05:01/DQB1∗ 02:01 (2.7%); HLA-A∗ 29/B∗ 44/DRB1∗ 07:01/DQA1∗ 02:01/DQB1∗ 02:02 (1.8%), the most frequent haplotypes. |
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ISSN: | 0198-8859 |
DOI: | 10.1016/j.humimm.2014.08.173 |