Impact of 3′UTR variation patterns of the KRAS gene on the aggressiveness of pancreatobiliary tumors with the KRAS G13D mutation in a Turkish population

• Published in: Pancreatology : official journal of the International Association of Pancreatology (IAP) ... [et al.] 2016-07, Vol.16 (4), p.677-686
• Main Authors: Egeli, Unal, Ak, Secil, Cecener, Gulsah, Tunca, Berrin, Tezcan, Gulcin, Sevinc, Elif Demirdogen, Kaya, Ekrem, Dundar, Halit Ziya, Sarkut, Pinar, Ozen, Yilmaz, Balcin, Ozkan, Evrensel, Turkkan, Yerci, Omer, Ugras, Nesrin
• Format: Article
• Language: English
• Subjects: 3′ untranslated region; Codon 13; Endocrinology & Metabolism; Gastroenterology and Hepatology; Invasion; KRAS; Mutation
• ISSN: 1424-3903; 1424-3911
• DOI: 10.1016/j.pan.2016.05.004

Abstract Objective Several studies have demonstrated the importance of mutations in codons 12, 13 and 61 and variations in the 3′ untranslated region (3′UTR) of the KRAS gene, frequently observed genetic events in the progression of pancreatobiliary tumors (PBT). However, limited data exist on the clinical effect of these alterations. The aim of the current study was to clarify the frequency of relevant alterations of the 3′UTR regions of the KRAS gene and the effect of KRAS 3′UTR polymorphisms on the prognosis of patients with codon 12, 13 and 61 mutations in a Turkish population with PBT. Methods Codons 12, 13, and 61 and 3′UTRs of the KRAS gene were screened by single-strand conformation polymorphism (SSCP) analysis and DNA sequencing in 43 patients and 10 controls. Chi-squared and independent sample T tests were used to evaluate the results of the mutation analysis and clinical features of the patients. Results We defined the c.38G > A (rs112445441, p.G13D) (39.54%) mutation and two 3′UTR variations, c.*4066delA (rs560890523) (23.26%) and c.*4065_*4066delAA (rs57698689) (6.98%), in the KRAS gene of Turkish patients. There was a statistically significant relationship between the c.*4066delA (rs560890523) and c.*4065_*4066delAA (rs57698689) variations and invasion and lymph node metastasis status of the patients ( p   A (rs112445441, p.G13D), patients with c.*4066delA (rs560890523) and c.38G > A (rs112445441, p.G13D) presented more aggressive tumors with highly invasive features. The present study contributes findings regarding the clinical effects of KRAS alterations in PBT. Based on our study, further investigations are required.