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Theoretical Foundation for the Presence of Oxacarbenium Ions in Chemical Glycoside Synthesis
Glycoside formation in organic synthesis is believed to occur along a reaction path involving an activated glycosyl donor with a covalent bond between the glycosyl moiety and the leaving group, followed by formation of contact ion pairs with the glycosyl moiety loosely bound to the leaving group, an...
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Published in: | Journal of organic chemistry 2014-09, Vol.79 (17), p.7889-7894 |
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container_title | Journal of organic chemistry |
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creator | Hosoya, Takashi Takano, Toshiyuki Kosma, Paul Rosenau, Thomas |
description | Glycoside formation in organic synthesis is believed to occur along a reaction path involving an activated glycosyl donor with a covalent bond between the glycosyl moiety and the leaving group, followed by formation of contact ion pairs with the glycosyl moiety loosely bound to the leaving group, and eventually solvent-separated ion pairs with the glycosyl moiety and the leaving group being separated by solvent molecules. However, these ion pairs have never been experimentally observed. This study investigates the formation of the ion pairs from a covalent intermediate, 2,3,4,6-tetra-O-methyl-α-d-glucopyranosyl triflate, by means of computational chemistry. Geometry optimization of the ion pairs without solvent molecules resulted in re-formation of the covalent α- and β-triflates but was successful when four solvent (dichloromethane) molecules were taken into account. The DFT(M06-2X) computations indicated interconversion between the α- and β-covalent intermediates via the α- and β-contact ion pairs and the solvent-separated ion pairs. The calculated activation Gibbs energy of this interconversion was quite small (10.4–13.5 kcal/mol). Conformational analyses of the ion pairs indicated that the oxacarbenium ion adopts 4H3, 2H3/E3, 2H3/2S0, E3, 2,5B, and B2,5 pyranosyl ring conformations, with the stability of the conformers being strongly dependent on the relative location of the counteranion. |
doi_str_mv | 10.1021/jo501012s |
format | article |
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However, these ion pairs have never been experimentally observed. This study investigates the formation of the ion pairs from a covalent intermediate, 2,3,4,6-tetra-O-methyl-α-d-glucopyranosyl triflate, by means of computational chemistry. Geometry optimization of the ion pairs without solvent molecules resulted in re-formation of the covalent α- and β-triflates but was successful when four solvent (dichloromethane) molecules were taken into account. The DFT(M06-2X) computations indicated interconversion between the α- and β-covalent intermediates via the α- and β-contact ion pairs and the solvent-separated ion pairs. The calculated activation Gibbs energy of this interconversion was quite small (10.4–13.5 kcal/mol). Conformational analyses of the ion pairs indicated that the oxacarbenium ion adopts 4H3, 2H3/E3, 2H3/2S0, E3, 2,5B, and B2,5 pyranosyl ring conformations, with the stability of the conformers being strongly dependent on the relative location of the counteranion.</description><identifier>ISSN: 0022-3263</identifier><identifier>EISSN: 1520-6904</identifier><identifier>DOI: 10.1021/jo501012s</identifier><identifier>PMID: 25105663</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Glycosides - chemical synthesis ; Glycosides - chemistry ; Ions - chemistry ; Methyl Chloride - analogs & derivatives ; Methyl Chloride - chemistry ; Models, Molecular</subject><ispartof>Journal of organic chemistry, 2014-09, Vol.79 (17), p.7889-7894</ispartof><rights>Copyright © 2014 American Chemical Society</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a348t-70d07fa289c031127549a852e47523bdd1ccfcea754c33e4847a950e38d57c5b3</citedby><cites>FETCH-LOGICAL-a348t-70d07fa289c031127549a852e47523bdd1ccfcea754c33e4847a950e38d57c5b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27903,27904</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25105663$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hosoya, Takashi</creatorcontrib><creatorcontrib>Takano, Toshiyuki</creatorcontrib><creatorcontrib>Kosma, Paul</creatorcontrib><creatorcontrib>Rosenau, Thomas</creatorcontrib><title>Theoretical Foundation for the Presence of Oxacarbenium Ions in Chemical Glycoside Synthesis</title><title>Journal of organic chemistry</title><addtitle>J. Org. Chem</addtitle><description>Glycoside formation in organic synthesis is believed to occur along a reaction path involving an activated glycosyl donor with a covalent bond between the glycosyl moiety and the leaving group, followed by formation of contact ion pairs with the glycosyl moiety loosely bound to the leaving group, and eventually solvent-separated ion pairs with the glycosyl moiety and the leaving group being separated by solvent molecules. However, these ion pairs have never been experimentally observed. This study investigates the formation of the ion pairs from a covalent intermediate, 2,3,4,6-tetra-O-methyl-α-d-glucopyranosyl triflate, by means of computational chemistry. Geometry optimization of the ion pairs without solvent molecules resulted in re-formation of the covalent α- and β-triflates but was successful when four solvent (dichloromethane) molecules were taken into account. The DFT(M06-2X) computations indicated interconversion between the α- and β-covalent intermediates via the α- and β-contact ion pairs and the solvent-separated ion pairs. The calculated activation Gibbs energy of this interconversion was quite small (10.4–13.5 kcal/mol). Conformational analyses of the ion pairs indicated that the oxacarbenium ion adopts 4H3, 2H3/E3, 2H3/2S0, E3, 2,5B, and B2,5 pyranosyl ring conformations, with the stability of the conformers being strongly dependent on the relative location of the counteranion.</description><subject>Glycosides - chemical synthesis</subject><subject>Glycosides - chemistry</subject><subject>Ions - chemistry</subject><subject>Methyl Chloride - analogs & derivatives</subject><subject>Methyl Chloride - chemistry</subject><subject>Models, Molecular</subject><issn>0022-3263</issn><issn>1520-6904</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><recordid>eNptkE1LAzEQhoMotlYP_gHJxYOH1Umy2Y-jFFuFQgXrTViy2Vma0k1Ksgv23xut9uRcBobnfRkeQq4Z3DPg7GHjJDBgPJyQMZMckqyE9JSMAThPBM_EiFyEsIE4UspzMuKSgcwyMSYfqzU6j73RaktnbrCN6o2ztHWe9mukrx4DWo3UtXT5qbTyNVozdPTF2UCNpdM1dj_h-XavXTAN0re9jdFgwiU5a9U24NXvnpD32dNq-pwslvOX6eMiUSIt-iSHBvJW8aLUIBjjuUxLVUiOaS65qJuGad1qVPGuhcC0SHNVSkBRNDLXshYTcnfo1d6F4LGtdt50yu8rBtW3oepoKLI3B3Y31B02R_JPSQRuD4DSIeYGb-Pr_xR9AfkcbRw</recordid><startdate>20140905</startdate><enddate>20140905</enddate><creator>Hosoya, Takashi</creator><creator>Takano, Toshiyuki</creator><creator>Kosma, Paul</creator><creator>Rosenau, Thomas</creator><general>American Chemical Society</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>20140905</creationdate><title>Theoretical Foundation for the Presence of Oxacarbenium Ions in Chemical Glycoside Synthesis</title><author>Hosoya, Takashi ; Takano, Toshiyuki ; Kosma, Paul ; Rosenau, Thomas</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a348t-70d07fa289c031127549a852e47523bdd1ccfcea754c33e4847a950e38d57c5b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Glycosides - chemical synthesis</topic><topic>Glycosides - chemistry</topic><topic>Ions - chemistry</topic><topic>Methyl Chloride - analogs & derivatives</topic><topic>Methyl Chloride - chemistry</topic><topic>Models, Molecular</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hosoya, Takashi</creatorcontrib><creatorcontrib>Takano, Toshiyuki</creatorcontrib><creatorcontrib>Kosma, Paul</creatorcontrib><creatorcontrib>Rosenau, Thomas</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><jtitle>Journal of organic chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hosoya, Takashi</au><au>Takano, Toshiyuki</au><au>Kosma, Paul</au><au>Rosenau, Thomas</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Theoretical Foundation for the Presence of Oxacarbenium Ions in Chemical Glycoside Synthesis</atitle><jtitle>Journal of organic chemistry</jtitle><addtitle>J. Org. Chem</addtitle><date>2014-09-05</date><risdate>2014</risdate><volume>79</volume><issue>17</issue><spage>7889</spage><epage>7894</epage><pages>7889-7894</pages><issn>0022-3263</issn><eissn>1520-6904</eissn><abstract>Glycoside formation in organic synthesis is believed to occur along a reaction path involving an activated glycosyl donor with a covalent bond between the glycosyl moiety and the leaving group, followed by formation of contact ion pairs with the glycosyl moiety loosely bound to the leaving group, and eventually solvent-separated ion pairs with the glycosyl moiety and the leaving group being separated by solvent molecules. However, these ion pairs have never been experimentally observed. This study investigates the formation of the ion pairs from a covalent intermediate, 2,3,4,6-tetra-O-methyl-α-d-glucopyranosyl triflate, by means of computational chemistry. Geometry optimization of the ion pairs without solvent molecules resulted in re-formation of the covalent α- and β-triflates but was successful when four solvent (dichloromethane) molecules were taken into account. The DFT(M06-2X) computations indicated interconversion between the α- and β-covalent intermediates via the α- and β-contact ion pairs and the solvent-separated ion pairs. The calculated activation Gibbs energy of this interconversion was quite small (10.4–13.5 kcal/mol). Conformational analyses of the ion pairs indicated that the oxacarbenium ion adopts 4H3, 2H3/E3, 2H3/2S0, E3, 2,5B, and B2,5 pyranosyl ring conformations, with the stability of the conformers being strongly dependent on the relative location of the counteranion.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>25105663</pmid><doi>10.1021/jo501012s</doi><tpages>6</tpages></addata></record> |
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subjects | Glycosides - chemical synthesis Glycosides - chemistry Ions - chemistry Methyl Chloride - analogs & derivatives Methyl Chloride - chemistry Models, Molecular |
title | Theoretical Foundation for the Presence of Oxacarbenium Ions in Chemical Glycoside Synthesis |
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