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Structure and dynamics of water and lipid molecules in charged anionic DMPG lipid bilayer membranes

Molecular dynamics simulations have been used to investigate the influence of the valency of counter-ions on the structure of freestanding bilayer membranes of the anionic 1,2-dimyristoyl-sn-glycero-3-phosphoglycerol (DMPG) lipid at 310 K and 1 atm. At this temperature, the membrane is in the fluid...

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Published in:The Journal of chemical physics 2016-04, Vol.144 (14), p.144904-144904
Main Authors: Rønnest, A. K., Peters, G. H., Hansen, F. Y., Taub, H., Miskowiec, A.
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description Molecular dynamics simulations have been used to investigate the influence of the valency of counter-ions on the structure of freestanding bilayer membranes of the anionic 1,2-dimyristoyl-sn-glycero-3-phosphoglycerol (DMPG) lipid at 310 K and 1 atm. At this temperature, the membrane is in the fluid phase with a monovalent counter-ion and in the gel phase with a divalent counter-ion. The diffusion constant of water as a function of its depth in the membrane has been determined from mean-square-displacement calculations. Also, calculated incoherent quasielastic neutron scattering functions have been compared to experimental results and used to determine an average diffusion constant for all water molecules in the system. On extrapolating the diffusion constants inferred experimentally to a temperature of 310 K, reasonable agreement with the simulations is obtained. However, the experiments do not have the sensitivity to confirm the diffusion of a small component of water bound to the lipids as found in the simulations. In addition, the orientation of the dipole moment of the water molecules has been determined as a function of their depth in the membrane. Previous indirect estimates of the electrostatic potential within phospholipid membranes imply an enormous electric field of 108–109 V m−1, which is likely to have great significance in controlling the conformation of translocating membrane proteins and in the transfer of ions and molecules across the membrane. We have calculated the membrane potential for DMPG bilayers and found ∼1 V (∼2 ⋅ 108 V m−1) when in the fluid phase with a monovalent counter-ion and ∼1.4 V (∼2.8 ⋅ 108 V m−1) when in the gel phase with a divalent counter-ion. The number of water molecules for a fully hydrated DMPG membrane has been estimated to be 9.7 molecules per lipid in the gel phase and 17.5 molecules in the fluid phase, considerably smaller than inferred experimentally for 1,2-dimyristoyl-sn-glycero-3-phosphorylcholine (DMPC) membranes but comparable to the number inferred for 1,2-dilauroyl-sn-glycero-3-phosphoethanolamine (DLPE) membranes. Some of the properties of the DMPG membrane are compared with those of the neutral zwitterionic DMPC bilayer membrane at 303 K and 1 atm, which is the same reduced temperature with respect to the gel-to-fluid transition temperature as 310 K is for the DMPG bilayer membrane.
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On extrapolating the diffusion constants inferred experimentally to a temperature of 310 K, reasonable agreement with the simulations is obtained. However, the experiments do not have the sensitivity to confirm the diffusion of a small component of water bound to the lipids as found in the simulations. In addition, the orientation of the dipole moment of the water molecules has been determined as a function of their depth in the membrane. Previous indirect estimates of the electrostatic potential within phospholipid membranes imply an enormous electric field of 108–109 V m−1, which is likely to have great significance in controlling the conformation of translocating membrane proteins and in the transfer of ions and molecules across the membrane. We have calculated the membrane potential for DMPG bilayers and found ∼1 V (∼2 ⋅ 108 V m−1) when in the fluid phase with a monovalent counter-ion and ∼1.4 V (∼2.8 ⋅ 108 V m−1) when in the gel phase with a divalent counter-ion. 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K.</creatorcontrib><creatorcontrib>Peters, G. H.</creatorcontrib><creatorcontrib>Hansen, F. Y.</creatorcontrib><creatorcontrib>Taub, H.</creatorcontrib><creatorcontrib>Miskowiec, A.</creatorcontrib><title>Structure and dynamics of water and lipid molecules in charged anionic DMPG lipid bilayer membranes</title><title>The Journal of chemical physics</title><addtitle>J Chem Phys</addtitle><description>Molecular dynamics simulations have been used to investigate the influence of the valency of counter-ions on the structure of freestanding bilayer membranes of the anionic 1,2-dimyristoyl-sn-glycero-3-phosphoglycerol (DMPG) lipid at 310 K and 1 atm. At this temperature, the membrane is in the fluid phase with a monovalent counter-ion and in the gel phase with a divalent counter-ion. The diffusion constant of water as a function of its depth in the membrane has been determined from mean-square-displacement calculations. 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The diffusion constant of water as a function of its depth in the membrane has been determined from mean-square-displacement calculations. Also, calculated incoherent quasielastic neutron scattering functions have been compared to experimental results and used to determine an average diffusion constant for all water molecules in the system. On extrapolating the diffusion constants inferred experimentally to a temperature of 310 K, reasonable agreement with the simulations is obtained. However, the experiments do not have the sensitivity to confirm the diffusion of a small component of water bound to the lipids as found in the simulations. In addition, the orientation of the dipole moment of the water molecules has been determined as a function of their depth in the membrane. Previous indirect estimates of the electrostatic potential within phospholipid membranes imply an enormous electric field of 108–109 V m−1, which is likely to have great significance in controlling the conformation of translocating membrane proteins and in the transfer of ions and molecules across the membrane. We have calculated the membrane potential for DMPG bilayers and found ∼1 V (∼2 ⋅ 108 V m−1) when in the fluid phase with a monovalent counter-ion and ∼1.4 V (∼2.8 ⋅ 108 V m−1) when in the gel phase with a divalent counter-ion. The number of water molecules for a fully hydrated DMPG membrane has been estimated to be 9.7 molecules per lipid in the gel phase and 17.5 molecules in the fluid phase, considerably smaller than inferred experimentally for 1,2-dimyristoyl-sn-glycero-3-phosphorylcholine (DMPC) membranes but comparable to the number inferred for 1,2-dilauroyl-sn-glycero-3-phosphoethanolamine (DLPE) membranes. 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subjects AMINES
Anions - chemistry
DIFFUSION
Dipole moments
ELECTRIC FIELDS
EXPERIMENTAL DATA
FLUIDS
GELS
INORGANIC, ORGANIC, PHYSICAL AND ANALYTICAL CHEMISTRY
IONS
LAYERS
Lipid Bilayers - chemistry
Lipids
Lipids - chemistry
Mathematical analysis
MEMBRANE PROTEINS
Membranes
Molecular dynamics
MOLECULAR DYNAMICS METHOD
Molecular Dynamics Simulation
Molecular Structure
MOLECULES
NEUTRON REACTIONS
Neutron scattering
Phosphatidylglycerols - chemistry
PHOSPHOLIPIDS
Phosphorylcholine
Physics
Proteins
QUASI-ELASTIC SCATTERING
Scattering functions
SIMULATION
TRANSITION TEMPERATURE
Water - chemistry
ZWITTERIONIC COMPOUNDS
title Structure and dynamics of water and lipid molecules in charged anionic DMPG lipid bilayer membranes
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