Loading…
CULTIVATION AND AUTOMATIC COUNTING OF DIATOM ALGAE CELLS IN MULTI-WELL PLASTIC PLATES
The planktonie diatoms, Asterionella formosa Kütz. and Synedra acus Hass., were cultivated in 96-well flat-bottom plastic plates with 100 μL of medium per well. At regular time intervals, cells were counted using an inverted microscope. Typically, the number of cells per well increased over 10 days...
Saved in:
Published in: | Diatom research 2007-05, Vol.22 (1), p.189-195 |
---|---|
Main Authors: | , , , , , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that this one cites Items that cite this one |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | cdi_FETCH-LOGICAL-c341t-6ff4942cfd72005b0bf10590a6792a2c875523dd795b79dfb4a8f604fed629a53 |
---|---|
cites | cdi_FETCH-LOGICAL-c341t-6ff4942cfd72005b0bf10590a6792a2c875523dd795b79dfb4a8f604fed629a53 |
container_end_page | 195 |
container_issue | 1 |
container_start_page | 189 |
container_title | Diatom research |
container_volume | 22 |
creator | Safonova, Tatyana A. Aslamov, Ilya A. Basharina, Tatyana N. Chenski, Alexander G. Vereschagin, Andrey L. Glyzina, Olga Yu Grachev, Michael A. |
description | The planktonie diatoms, Asterionella formosa Kütz. and Synedra acus Hass., were cultivated in 96-well flat-bottom plastic plates with 100 μL of medium per well. At regular time intervals, cells were counted using an inverted microscope. Typically, the number of cells per well increased over 10 days from 50-200 to >1000. The first growth inhibition experiments were successfully run at room temperature using natural illumination. However, for better control of the growth conditions, a special micro-incubator was manufactured. This device hosted two incubation plates and was equipped with Peltier elements for cooling below room temperature, and a small luminescent lamp. For automatic counting, two digital micro-photographs of each well were taken, first at a 0.2 msec exposure and the second at a 5 msec exposure. The images were treated by means of custom software based on ImagePro to identify and count the diatom cells. Cultivation of diatoms on the micro-scale proved to be a convenient technique. Using this technique, we were able to study the effects of mercaptoethanol, Cu
2+
on A. formosa and Cu
2+
, Hg
2+
, Cd
2+
and phenanthroline upon the growth of S. acus. |
doi_str_mv | 10.1080/0269249X.2007.9705703 |
format | article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_crossref_primary_10_1080_0269249X_2007_9705703</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>20117617</sourcerecordid><originalsourceid>FETCH-LOGICAL-c341t-6ff4942cfd72005b0bf10590a6792a2c875523dd795b79dfb4a8f604fed629a53</originalsourceid><addsrcrecordid>eNp9kN1LwzAUxYMoOOb-BCFPvnUmadI0b5buw0LXCmvVt5B-BCrdOpMN2X9vyuar9-VwL-ccLj8AHjGaYxSiZ0QCQaj4nBOE-FxwxDjyb8CEYCa80Kf8FkxGjzea7sHM2i_khgqfMDEBZVymRfIeFUmewShbwKgs8o1bYxjnZVYk2RrmK7hIIneGUbqOljBepukWJhncjFnvw63wLY22Y8hpsdw-gDutetvOrjoF5WpZxK9emq-TOEq92qf46AVaU0FJrRvuvmcVqjRGTCAVcEEUqUPOGPGbhgtWcdHoiqpQB4jqtgmIUMyfgqdL78EM36fWHuWus3Xb92rfDicrCcKYB5g7I7sYazNYa1otD6bbKXOWGMmRo_zjKEeO8srR5V4uuW6vB7NTP4PpG3lU534w2qh93Vnp_1_xC2URcaI</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>20117617</pqid></control><display><type>article</type><title>CULTIVATION AND AUTOMATIC COUNTING OF DIATOM ALGAE CELLS IN MULTI-WELL PLASTIC PLATES</title><source>Taylor and Francis Science and Technology Collection</source><creator>Safonova, Tatyana A. ; Aslamov, Ilya A. ; Basharina, Tatyana N. ; Chenski, Alexander G. ; Vereschagin, Andrey L. ; Glyzina, Olga Yu ; Grachev, Michael A.</creator><creatorcontrib>Safonova, Tatyana A. ; Aslamov, Ilya A. ; Basharina, Tatyana N. ; Chenski, Alexander G. ; Vereschagin, Andrey L. ; Glyzina, Olga Yu ; Grachev, Michael A.</creatorcontrib><description>The planktonie diatoms, Asterionella formosa Kütz. and Synedra acus Hass., were cultivated in 96-well flat-bottom plastic plates with 100 μL of medium per well. At regular time intervals, cells were counted using an inverted microscope. Typically, the number of cells per well increased over 10 days from 50-200 to >1000. The first growth inhibition experiments were successfully run at room temperature using natural illumination. However, for better control of the growth conditions, a special micro-incubator was manufactured. This device hosted two incubation plates and was equipped with Peltier elements for cooling below room temperature, and a small luminescent lamp. For automatic counting, two digital micro-photographs of each well were taken, first at a 0.2 msec exposure and the second at a 5 msec exposure. The images were treated by means of custom software based on ImagePro to identify and count the diatom cells. Cultivation of diatoms on the micro-scale proved to be a convenient technique. Using this technique, we were able to study the effects of mercaptoethanol, Cu
2+
on A. formosa and Cu
2+
, Hg
2+
, Cd
2+
and phenanthroline upon the growth of S. acus.</description><identifier>ISSN: 0269-249X</identifier><identifier>EISSN: 2159-8347</identifier><identifier>DOI: 10.1080/0269249X.2007.9705703</identifier><language>eng</language><publisher>Taylor & Francis Group</publisher><subject>Asterionella formosa ; Bacillariophyceae ; Freshwater ; Synedra acus</subject><ispartof>Diatom research, 2007-05, Vol.22 (1), p.189-195</ispartof><rights>Copyright Taylor & Francis Group, LLC 2007</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c341t-6ff4942cfd72005b0bf10590a6792a2c875523dd795b79dfb4a8f604fed629a53</citedby><cites>FETCH-LOGICAL-c341t-6ff4942cfd72005b0bf10590a6792a2c875523dd795b79dfb4a8f604fed629a53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,778,782,27907,27908</link.rule.ids></links><search><creatorcontrib>Safonova, Tatyana A.</creatorcontrib><creatorcontrib>Aslamov, Ilya A.</creatorcontrib><creatorcontrib>Basharina, Tatyana N.</creatorcontrib><creatorcontrib>Chenski, Alexander G.</creatorcontrib><creatorcontrib>Vereschagin, Andrey L.</creatorcontrib><creatorcontrib>Glyzina, Olga Yu</creatorcontrib><creatorcontrib>Grachev, Michael A.</creatorcontrib><title>CULTIVATION AND AUTOMATIC COUNTING OF DIATOM ALGAE CELLS IN MULTI-WELL PLASTIC PLATES</title><title>Diatom research</title><description>The planktonie diatoms, Asterionella formosa Kütz. and Synedra acus Hass., were cultivated in 96-well flat-bottom plastic plates with 100 μL of medium per well. At regular time intervals, cells were counted using an inverted microscope. Typically, the number of cells per well increased over 10 days from 50-200 to >1000. The first growth inhibition experiments were successfully run at room temperature using natural illumination. However, for better control of the growth conditions, a special micro-incubator was manufactured. This device hosted two incubation plates and was equipped with Peltier elements for cooling below room temperature, and a small luminescent lamp. For automatic counting, two digital micro-photographs of each well were taken, first at a 0.2 msec exposure and the second at a 5 msec exposure. The images were treated by means of custom software based on ImagePro to identify and count the diatom cells. Cultivation of diatoms on the micro-scale proved to be a convenient technique. Using this technique, we were able to study the effects of mercaptoethanol, Cu
2+
on A. formosa and Cu
2+
, Hg
2+
, Cd
2+
and phenanthroline upon the growth of S. acus.</description><subject>Asterionella formosa</subject><subject>Bacillariophyceae</subject><subject>Freshwater</subject><subject>Synedra acus</subject><issn>0269-249X</issn><issn>2159-8347</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><recordid>eNp9kN1LwzAUxYMoOOb-BCFPvnUmadI0b5buw0LXCmvVt5B-BCrdOpMN2X9vyuar9-VwL-ccLj8AHjGaYxSiZ0QCQaj4nBOE-FxwxDjyb8CEYCa80Kf8FkxGjzea7sHM2i_khgqfMDEBZVymRfIeFUmewShbwKgs8o1bYxjnZVYk2RrmK7hIIneGUbqOljBepukWJhncjFnvw63wLY22Y8hpsdw-gDutetvOrjoF5WpZxK9emq-TOEq92qf46AVaU0FJrRvuvmcVqjRGTCAVcEEUqUPOGPGbhgtWcdHoiqpQB4jqtgmIUMyfgqdL78EM36fWHuWus3Xb92rfDicrCcKYB5g7I7sYazNYa1otD6bbKXOWGMmRo_zjKEeO8srR5V4uuW6vB7NTP4PpG3lU534w2qh93Vnp_1_xC2URcaI</recordid><startdate>20070501</startdate><enddate>20070501</enddate><creator>Safonova, Tatyana A.</creator><creator>Aslamov, Ilya A.</creator><creator>Basharina, Tatyana N.</creator><creator>Chenski, Alexander G.</creator><creator>Vereschagin, Andrey L.</creator><creator>Glyzina, Olga Yu</creator><creator>Grachev, Michael A.</creator><general>Taylor & Francis Group</general><scope>AAYXX</scope><scope>CITATION</scope><scope>F1W</scope><scope>H95</scope><scope>L.G</scope></search><sort><creationdate>20070501</creationdate><title>CULTIVATION AND AUTOMATIC COUNTING OF DIATOM ALGAE CELLS IN MULTI-WELL PLASTIC PLATES</title><author>Safonova, Tatyana A. ; Aslamov, Ilya A. ; Basharina, Tatyana N. ; Chenski, Alexander G. ; Vereschagin, Andrey L. ; Glyzina, Olga Yu ; Grachev, Michael A.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c341t-6ff4942cfd72005b0bf10590a6792a2c875523dd795b79dfb4a8f604fed629a53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Asterionella formosa</topic><topic>Bacillariophyceae</topic><topic>Freshwater</topic><topic>Synedra acus</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Safonova, Tatyana A.</creatorcontrib><creatorcontrib>Aslamov, Ilya A.</creatorcontrib><creatorcontrib>Basharina, Tatyana N.</creatorcontrib><creatorcontrib>Chenski, Alexander G.</creatorcontrib><creatorcontrib>Vereschagin, Andrey L.</creatorcontrib><creatorcontrib>Glyzina, Olga Yu</creatorcontrib><creatorcontrib>Grachev, Michael A.</creatorcontrib><collection>CrossRef</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><jtitle>Diatom research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Safonova, Tatyana A.</au><au>Aslamov, Ilya A.</au><au>Basharina, Tatyana N.</au><au>Chenski, Alexander G.</au><au>Vereschagin, Andrey L.</au><au>Glyzina, Olga Yu</au><au>Grachev, Michael A.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>CULTIVATION AND AUTOMATIC COUNTING OF DIATOM ALGAE CELLS IN MULTI-WELL PLASTIC PLATES</atitle><jtitle>Diatom research</jtitle><date>2007-05-01</date><risdate>2007</risdate><volume>22</volume><issue>1</issue><spage>189</spage><epage>195</epage><pages>189-195</pages><issn>0269-249X</issn><eissn>2159-8347</eissn><abstract>The planktonie diatoms, Asterionella formosa Kütz. and Synedra acus Hass., were cultivated in 96-well flat-bottom plastic plates with 100 μL of medium per well. At regular time intervals, cells were counted using an inverted microscope. Typically, the number of cells per well increased over 10 days from 50-200 to >1000. The first growth inhibition experiments were successfully run at room temperature using natural illumination. However, for better control of the growth conditions, a special micro-incubator was manufactured. This device hosted two incubation plates and was equipped with Peltier elements for cooling below room temperature, and a small luminescent lamp. For automatic counting, two digital micro-photographs of each well were taken, first at a 0.2 msec exposure and the second at a 5 msec exposure. The images were treated by means of custom software based on ImagePro to identify and count the diatom cells. Cultivation of diatoms on the micro-scale proved to be a convenient technique. Using this technique, we were able to study the effects of mercaptoethanol, Cu
2+
on A. formosa and Cu
2+
, Hg
2+
, Cd
2+
and phenanthroline upon the growth of S. acus.</abstract><pub>Taylor & Francis Group</pub><doi>10.1080/0269249X.2007.9705703</doi><tpages>7</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0269-249X |
ispartof | Diatom research, 2007-05, Vol.22 (1), p.189-195 |
issn | 0269-249X 2159-8347 |
language | eng |
recordid | cdi_crossref_primary_10_1080_0269249X_2007_9705703 |
source | Taylor and Francis Science and Technology Collection |
subjects | Asterionella formosa Bacillariophyceae Freshwater Synedra acus |
title | CULTIVATION AND AUTOMATIC COUNTING OF DIATOM ALGAE CELLS IN MULTI-WELL PLASTIC PLATES |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-16T22%3A57%3A35IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=CULTIVATION%20AND%20AUTOMATIC%20COUNTING%20OF%20DIATOM%20ALGAE%20CELLS%20IN%20MULTI-WELL%20PLASTIC%20PLATES&rft.jtitle=Diatom%20research&rft.au=Safonova,%20Tatyana%20A.&rft.date=2007-05-01&rft.volume=22&rft.issue=1&rft.spage=189&rft.epage=195&rft.pages=189-195&rft.issn=0269-249X&rft.eissn=2159-8347&rft_id=info:doi/10.1080/0269249X.2007.9705703&rft_dat=%3Cproquest_cross%3E20117617%3C/proquest_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c341t-6ff4942cfd72005b0bf10590a6792a2c875523dd795b79dfb4a8f604fed629a53%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=20117617&rft_id=info:pmid/&rfr_iscdi=true |