Bayesian Basket Trial Design Accounting for Multiple Cutoffs of an Ambiguous Biomarker

Basket trial designs enroll patients with different cancer types but the same genetic mutation or biomarker to evaluate the treatment effect of targeted therapy. However, the explicit biomarker sometimes may not be clearly identified. In this article, we propose a Bayesian basket trial design to acc...

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Published in:Statistics in biopharmaceutical research 2022-08, Vol.14 (3), p.342-348
Main Authors: Belay, Sheferaw Y., Guo, Xiang, Lin, Xiao, Xia, Fan, Xu, Jin
Format: Article
Language:English
Subjects:
Basket trial
Bayesian design
Biomarker
Two-stage design
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description Basket trial designs enroll patients with different cancer types but the same genetic mutation or biomarker to evaluate the treatment effect of targeted therapy. However, the explicit biomarker sometimes may not be clearly identified. In this article, we propose a Bayesian basket trial design to account for multiple cutoffs of ambiguous biomarkers and select the optimal cutoff window to maximize the beneficial subpopulation. A two-stage design is proposed for the estimation. Second, we propose threshold calibration and sample size determination to facilitate the design. Extensive simulations are conducted to demonstrate the operating characteristics of the two estimation methods in terms of probability of correct selection of optimal cutoff window and probability of efficacy.
doi_str_mv 10.1080/19466315.2022.2029555
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subjects Basket trial
Bayesian design
Biomarker
Two-stage design
title Bayesian Basket Trial Design Accounting for Multiple Cutoffs of an Ambiguous Biomarker
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