Loading…

Quantification analysis of translation initiation signal in vertebrate mRNAs: Effect of nucleotides at positions +4 ∼ +6 upon efficiency of translation initiation

Concerning initiation the translation signal in vertebrate mRNAs, a consensus sequence, (GCC)GCC(A or G)CCATGG, has been but actual initiation differ from it in a greater or lesser degree. Kozak monitored selection by ribosomes of the first versus second ATG codons as a function of mutations introdu...

Full description

Saved in:
Bibliographic Details
Published in:Nucleic Acids Symposium Series 2000-10, Vol.44 (1), p.77-78
Main Authors: Iida, Yôichi, Kanagu, Daisuke
Format: Article
Language:English
Citations: Items that cite this one
Online Access:Request full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c1507-7c4633391eaf5e6ed4c01867c42156343ad061a29221b9d515b21dd7cdc9d8973
cites
container_end_page 78
container_issue 1
container_start_page 77
container_title Nucleic Acids Symposium Series
container_volume 44
creator Iida, Yôichi
Kanagu, Daisuke
description Concerning initiation the translation signal in vertebrate mRNAs, a consensus sequence, (GCC)GCC(A or G)CCATGG, has been but actual initiation differ from it in a greater or lesser degree. Kozak monitored selection by ribosomes of the first versus second ATG codons as a function of mutations introduced at positions +4, +5, and +6 of the first ATG codon. Codons possessing G at +4 strongly enhanced selection of the first ATG codon. However, ATG codon recognition was unaffected by most mutations in positions +5 and +6. These data were well understood by our quantification analysis.
doi_str_mv 10.1093/nass/44.1.77
format article
fullrecord <record><control><sourceid>oup_TOX</sourceid><recordid>TN_cdi_crossref_primary_10_1093_nass_44_1_77</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><oup_id>10.1093/nass/44.1.77</oup_id><sourcerecordid>10.1093/nass/44.1.77</sourcerecordid><originalsourceid>FETCH-LOGICAL-c1507-7c4633391eaf5e6ed4c01867c42156343ad061a29221b9d515b21dd7cdc9d8973</originalsourceid><addsrcrecordid>eNp9kM1KAzEUhYMoWGp3PkB2Luq0uUkm6bgrpf5AURRdD2l-JDLNDJOM0DfwQXwMn8YncYa61bu5l8N37oGD0DmQGZCCzYOKcc75DGZSHqERSC6yBZX0GI0IFZAxEOIUTWJ8I_1wQmQhR-jzsVMheee1Sr4OWAVV7aOPuHY4tSrE6qD74JM_nNG_9lCv4HfbJrttVbJ493S_jFd47ZzVaTCHTle2Tt7YiFXCTR394I54yvH3xxeeCtw1_Tfr-mxvg97_HXmGTpyqop387jF6uV4_r26zzcPN3Wq5yTTkRGZSc8EYK8Aql1thDdcEFqKXKeSCcaYMEaBoQSlsC5NDvqVgjNRGF2ZRSDZGl4e_uq1jbK0rm9bvVLsvgZRDyeVQcsl5CaUc8IsDXnfN_-QPp3WBPg</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Quantification analysis of translation initiation signal in vertebrate mRNAs: Effect of nucleotides at positions +4 ∼ +6 upon efficiency of translation initiation</title><source>Oxford University Press Open Access</source><creator>Iida, Yôichi ; Kanagu, Daisuke</creator><creatorcontrib>Iida, Yôichi ; Kanagu, Daisuke</creatorcontrib><description>Concerning initiation the translation signal in vertebrate mRNAs, a consensus sequence, (GCC)GCC(A or G)CCATGG, has been but actual initiation differ from it in a greater or lesser degree. Kozak monitored selection by ribosomes of the first versus second ATG codons as a function of mutations introduced at positions +4, +5, and +6 of the first ATG codon. Codons possessing G at +4 strongly enhanced selection of the first ATG codon. However, ATG codon recognition was unaffected by most mutations in positions +5 and +6. These data were well understood by our quantification analysis.</description><identifier>ISSN: 0261-3166</identifier><identifier>EISSN: 1746-8272</identifier><identifier>DOI: 10.1093/nass/44.1.77</identifier><language>eng</language><publisher>Oxford University Press</publisher><ispartof>Nucleic Acids Symposium Series, 2000-10, Vol.44 (1), p.77-78</ispartof><rights>2000 Oxford University Press 2000</rights><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c1507-7c4633391eaf5e6ed4c01867c42156343ad061a29221b9d515b21dd7cdc9d8973</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,1598,27901,27902</link.rule.ids><linktorsrc>$$Uhttps://dx.doi.org/10.1093/nass/44.1.77$$EView_record_in_Oxford_University_Press$$FView_record_in_$$GOxford_University_Press</linktorsrc></links><search><creatorcontrib>Iida, Yôichi</creatorcontrib><creatorcontrib>Kanagu, Daisuke</creatorcontrib><title>Quantification analysis of translation initiation signal in vertebrate mRNAs: Effect of nucleotides at positions +4 ∼ +6 upon efficiency of translation initiation</title><title>Nucleic Acids Symposium Series</title><addtitle>Nucleic Acids Symp Ser</addtitle><description>Concerning initiation the translation signal in vertebrate mRNAs, a consensus sequence, (GCC)GCC(A or G)CCATGG, has been but actual initiation differ from it in a greater or lesser degree. Kozak monitored selection by ribosomes of the first versus second ATG codons as a function of mutations introduced at positions +4, +5, and +6 of the first ATG codon. Codons possessing G at +4 strongly enhanced selection of the first ATG codon. However, ATG codon recognition was unaffected by most mutations in positions +5 and +6. These data were well understood by our quantification analysis.</description><issn>0261-3166</issn><issn>1746-8272</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2000</creationdate><recordtype>article</recordtype><recordid>eNp9kM1KAzEUhYMoWGp3PkB2Luq0uUkm6bgrpf5AURRdD2l-JDLNDJOM0DfwQXwMn8YncYa61bu5l8N37oGD0DmQGZCCzYOKcc75DGZSHqERSC6yBZX0GI0IFZAxEOIUTWJ8I_1wQmQhR-jzsVMheee1Sr4OWAVV7aOPuHY4tSrE6qD74JM_nNG_9lCv4HfbJrttVbJ493S_jFd47ZzVaTCHTle2Tt7YiFXCTR394I54yvH3xxeeCtw1_Tfr-mxvg97_HXmGTpyqop387jF6uV4_r26zzcPN3Wq5yTTkRGZSc8EYK8Aql1thDdcEFqKXKeSCcaYMEaBoQSlsC5NDvqVgjNRGF2ZRSDZGl4e_uq1jbK0rm9bvVLsvgZRDyeVQcsl5CaUc8IsDXnfN_-QPp3WBPg</recordid><startdate>200010</startdate><enddate>200010</enddate><creator>Iida, Yôichi</creator><creator>Kanagu, Daisuke</creator><general>Oxford University Press</general><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>200010</creationdate><title>Quantification analysis of translation initiation signal in vertebrate mRNAs: Effect of nucleotides at positions +4 ∼ +6 upon efficiency of translation initiation</title><author>Iida, Yôichi ; Kanagu, Daisuke</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c1507-7c4633391eaf5e6ed4c01867c42156343ad061a29221b9d515b21dd7cdc9d8973</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2000</creationdate><toplevel>online_resources</toplevel><creatorcontrib>Iida, Yôichi</creatorcontrib><creatorcontrib>Kanagu, Daisuke</creatorcontrib><collection>CrossRef</collection><jtitle>Nucleic Acids Symposium Series</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Iida, Yôichi</au><au>Kanagu, Daisuke</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Quantification analysis of translation initiation signal in vertebrate mRNAs: Effect of nucleotides at positions +4 ∼ +6 upon efficiency of translation initiation</atitle><jtitle>Nucleic Acids Symposium Series</jtitle><stitle>Nucleic Acids Symp Ser</stitle><date>2000-10</date><risdate>2000</risdate><volume>44</volume><issue>1</issue><spage>77</spage><epage>78</epage><pages>77-78</pages><issn>0261-3166</issn><eissn>1746-8272</eissn><abstract>Concerning initiation the translation signal in vertebrate mRNAs, a consensus sequence, (GCC)GCC(A or G)CCATGG, has been but actual initiation differ from it in a greater or lesser degree. Kozak monitored selection by ribosomes of the first versus second ATG codons as a function of mutations introduced at positions +4, +5, and +6 of the first ATG codon. Codons possessing G at +4 strongly enhanced selection of the first ATG codon. However, ATG codon recognition was unaffected by most mutations in positions +5 and +6. These data were well understood by our quantification analysis.</abstract><pub>Oxford University Press</pub><doi>10.1093/nass/44.1.77</doi><tpages>2</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext_linktorsrc
identifier ISSN: 0261-3166
ispartof Nucleic Acids Symposium Series, 2000-10, Vol.44 (1), p.77-78
issn 0261-3166
1746-8272
language eng
recordid cdi_crossref_primary_10_1093_nass_44_1_77
source Oxford University Press Open Access
title Quantification analysis of translation initiation signal in vertebrate mRNAs: Effect of nucleotides at positions +4 ∼ +6 upon efficiency of translation initiation
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-06T13%3A07%3A14IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-oup_TOX&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Quantification%20analysis%20of%20translation%20initiation%20signal%20in%20vertebrate%20mRNAs:%20Effect%20of%20nucleotides%20at%20positions%20+4%20%E2%88%BC%20+6%20upon%20efficiency%20of%20translation%20initiation&rft.jtitle=Nucleic%20Acids%20Symposium%20Series&rft.au=Iida,%20Y%C3%B4ichi&rft.date=2000-10&rft.volume=44&rft.issue=1&rft.spage=77&rft.epage=78&rft.pages=77-78&rft.issn=0261-3166&rft.eissn=1746-8272&rft_id=info:doi/10.1093/nass/44.1.77&rft_dat=%3Coup_TOX%3E10.1093/nass/44.1.77%3C/oup_TOX%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c1507-7c4633391eaf5e6ed4c01867c42156343ad061a29221b9d515b21dd7cdc9d8973%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_id=info:pmid/&rft_oup_id=10.1093/nass/44.1.77&rfr_iscdi=true