Biochemical and kinetic properties of three indoleamine 2,3-dioxygenases of Aspergillus fumigatus: mechanism of increase in the apparent K m by ascorbate

• Published in: The FEBS journal 2024-11, Vol.291 (22), p.5037-5050
• Main Author: Yuasa, Hajime Julie
• Format: Article
• Language: English
• Subjects: Ascorbic Acid - chemistry; Ascorbic Acid - metabolism; Aspergillus fumigatus - enzymology; Aspergillus fumigatus - genetics; Fungal Proteins - antagonists & inhibitors; Fungal Proteins - chemistry; Fungal Proteins - genetics; Fungal Proteins - metabolism; Indoleamine-Pyrrole 2,3,-Dioxygenase - antagonists & inhibitors; Indoleamine-Pyrrole 2,3,-Dioxygenase - chemistry; Indoleamine-Pyrrole 2,3,-Dioxygenase - genetics; Indoleamine-Pyrrole 2,3,-Dioxygenase - metabolism; Kinetics; Oxidation-Reduction; Tryptophan - chemistry; Tryptophan - metabolism
• ISSN: 1742-464X; 1742-4658
• DOI: 10.1111/febs.17290

Indoleamine 2,3-dioxygenase (IDO) is a monomeric heme enzyme that catalyzes the oxidative cleavage of tryptophan (L-Trp) to form N-formyl-kynurenine. Similar to other heme proteins, IDO only binds to O when the heme iron is ferrous (Fe ), thereby rendering the enzyme active. Thus, ascorbate (Asc, a reducing agent) and methylene blue (MB, an electron carrier) are commonly added to in vitro IDO assay systems. However, Asc and MB have been recently reported to significantly impact the measurement of the enzymatic parameters of vertebrate IDO. Aspergillus fumigatus is a filamentous fungus and the most common cause of invasive aspergillosis; it has three IDO genes (IDOα, IDOβ, and IDOγ). The Fe -O IDOs of A. fumigatus, particularly Fe -O IDOγ, have relatively long half-lives in their autoxidation; however, the autoxidation was accelerated by Asc. Similar to vertebrate IDOs, Asc acted as a competitive (or mixed-competitive) inhibitor of the IDOs of A. fumigatus. A positive correlation (in the order of IDOγ > IDOβ > IDOα) was observed between the inhibitory sensitivity of the IDOs to Asc and the facilitation of their autoxidation by Asc. The Fe -O IDO can repeat the dioxygenase reaction as long as it reacts with L-Trp; however, substrate-free Fe -O IDO is converted into inactive Fe -IDO by autoxidation. Thus, L-Trp (which keeps the IDO active) competes with Asc (which inactivates IDO by accelerating autoxidation). This is probably why Asc, which is structurally quite different from L-Trp, appears to function as a competitive (or mixed-competitive) inhibitor of IDOs.