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Alterations of gene expression in failing myocardium following left ventricular assist device support
Departments of Medicine (Cardiovascular Division) and Surgery, University of Minnesota Health Sciences Center, Minneapolis, Minnesota 55455 Chronic unloading of the failing heart with a left ventricular assist device (LVAD) can decrease cardiac mass and myocyte size and has the potential to improve...
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Published in: | Physiological genomics 2003-08, Vol.14 (3), p.251-260 |
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description | Departments of Medicine (Cardiovascular Division) and Surgery, University of Minnesota Health Sciences Center, Minneapolis, Minnesota 55455
Chronic unloading of the failing heart with a left ventricular assist device (LVAD) can decrease cardiac mass and myocyte size and has the potential to improve contractile function. To study the effect of chronic ventricular unloading on myocardial gene expression, a microarray (U133A, Affymetrix) profiling gene expression was compared before and after LVAD support in seven patients with idiopathic dilated cardiomyopathy and end-stage heart failure. On average, 1,374 ± 155 genes were reported as "increased" and 1,629 ± 45 as "decreased" after LVAD support. A total of 130 gene transcripts achieved the strict criteria for upregulation and 49 gene transcripts for downregulation after LVAD support. Upregulated genes included a large proportion of transcription factors, genes related to cell growth/apoptosis/DNA repair, cell structure proteins, metabolism, and cell signaling/communication. LVAD support resulted in downregulation of genes for a group of cytokines. To validate the array data, 10 altered genes were confirmed by real-time RT-PCR. Further study showed that the phosphoinositide-3-kinase-forkhead protein pathway and proteins related to nitric oxide synthesis, including eNOS and dimethylarginine dimethylaminohydrolase isoform 1 (DDAH1, an enzyme regulating endogenous nitric oxide synthase activity), were significantly increased during the cardiac remodeling process. Increased eNOS and DDAH1 expression after LVAD support may contribute to improved endothelial function of the failing hearts.
congestive heart failure; microarray; gene profiling; dilated cardiomyopathy |
doi_str_mv | 10.1152/physiolgenomics.00022.2003 |
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Chronic unloading of the failing heart with a left ventricular assist device (LVAD) can decrease cardiac mass and myocyte size and has the potential to improve contractile function. To study the effect of chronic ventricular unloading on myocardial gene expression, a microarray (U133A, Affymetrix) profiling gene expression was compared before and after LVAD support in seven patients with idiopathic dilated cardiomyopathy and end-stage heart failure. On average, 1,374 ± 155 genes were reported as "increased" and 1,629 ± 45 as "decreased" after LVAD support. A total of 130 gene transcripts achieved the strict criteria for upregulation and 49 gene transcripts for downregulation after LVAD support. Upregulated genes included a large proportion of transcription factors, genes related to cell growth/apoptosis/DNA repair, cell structure proteins, metabolism, and cell signaling/communication. LVAD support resulted in downregulation of genes for a group of cytokines. To validate the array data, 10 altered genes were confirmed by real-time RT-PCR. Further study showed that the phosphoinositide-3-kinase-forkhead protein pathway and proteins related to nitric oxide synthesis, including eNOS and dimethylarginine dimethylaminohydrolase isoform 1 (DDAH1, an enzyme regulating endogenous nitric oxide synthase activity), were significantly increased during the cardiac remodeling process. Increased eNOS and DDAH1 expression after LVAD support may contribute to improved endothelial function of the failing hearts.
congestive heart failure; microarray; gene profiling; dilated cardiomyopathy</description><identifier>ISSN: 1094-8341</identifier><identifier>EISSN: 1531-2267</identifier><identifier>DOI: 10.1152/physiolgenomics.00022.2003</identifier><identifier>PMID: 12824457</identifier><language>eng</language><publisher>United States: Am Physiological Soc</publisher><subject>Adult ; Blotting, Western ; Cardiomyopathy, Dilated - genetics ; Cardiomyopathy, Dilated - metabolism ; Cardiomyopathy, Dilated - pathology ; Female ; Gene Expression Profiling ; Gene Expression Regulation - genetics ; Gene Expression Regulation, Enzymologic - genetics ; Heart-Assist Devices ; Humans ; Male ; Middle Aged ; Myocardium - enzymology ; Myocardium - metabolism ; Myocardium - pathology ; Nitric Oxide - metabolism ; Nitric Oxide Synthase - genetics ; Nitric Oxide Synthase Type II ; Nitric Oxide Synthase Type III ; Oligonucleotide Array Sequence Analysis ; Reverse Transcriptase Polymerase Chain Reaction ; Ventricular Dysfunction, Left - genetics ; Ventricular Dysfunction, Left - metabolism ; Ventricular Dysfunction, Left - pathology ; Ventricular Remodeling - genetics</subject><ispartof>Physiological genomics, 2003-08, Vol.14 (3), p.251-260</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c512t-318053296c65d652dc9e9e4fbfeea7ced3202261d131da6bbb5bcc30a3366f223</citedby><cites>FETCH-LOGICAL-c512t-318053296c65d652dc9e9e4fbfeea7ced3202261d131da6bbb5bcc30a3366f223</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/12824457$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Chen, YingJie</creatorcontrib><creatorcontrib>Park, Soon</creatorcontrib><creatorcontrib>Li, Yunfang</creatorcontrib><creatorcontrib>Missov, Emil</creatorcontrib><creatorcontrib>Hou, Mingxiao</creatorcontrib><creatorcontrib>Han, Xinqiang</creatorcontrib><creatorcontrib>Hall, Jennifer L</creatorcontrib><creatorcontrib>Miller, Leslie W</creatorcontrib><creatorcontrib>Bache, Robert J</creatorcontrib><title>Alterations of gene expression in failing myocardium following left ventricular assist device support</title><title>Physiological genomics</title><addtitle>Physiol Genomics</addtitle><description>Departments of Medicine (Cardiovascular Division) and Surgery, University of Minnesota Health Sciences Center, Minneapolis, Minnesota 55455
Chronic unloading of the failing heart with a left ventricular assist device (LVAD) can decrease cardiac mass and myocyte size and has the potential to improve contractile function. To study the effect of chronic ventricular unloading on myocardial gene expression, a microarray (U133A, Affymetrix) profiling gene expression was compared before and after LVAD support in seven patients with idiopathic dilated cardiomyopathy and end-stage heart failure. On average, 1,374 ± 155 genes were reported as "increased" and 1,629 ± 45 as "decreased" after LVAD support. A total of 130 gene transcripts achieved the strict criteria for upregulation and 49 gene transcripts for downregulation after LVAD support. Upregulated genes included a large proportion of transcription factors, genes related to cell growth/apoptosis/DNA repair, cell structure proteins, metabolism, and cell signaling/communication. LVAD support resulted in downregulation of genes for a group of cytokines. To validate the array data, 10 altered genes were confirmed by real-time RT-PCR. Further study showed that the phosphoinositide-3-kinase-forkhead protein pathway and proteins related to nitric oxide synthesis, including eNOS and dimethylarginine dimethylaminohydrolase isoform 1 (DDAH1, an enzyme regulating endogenous nitric oxide synthase activity), were significantly increased during the cardiac remodeling process. Increased eNOS and DDAH1 expression after LVAD support may contribute to improved endothelial function of the failing hearts.
congestive heart failure; microarray; gene profiling; dilated cardiomyopathy</description><subject>Adult</subject><subject>Blotting, Western</subject><subject>Cardiomyopathy, Dilated - genetics</subject><subject>Cardiomyopathy, Dilated - metabolism</subject><subject>Cardiomyopathy, Dilated - pathology</subject><subject>Female</subject><subject>Gene Expression Profiling</subject><subject>Gene Expression Regulation - genetics</subject><subject>Gene Expression Regulation, Enzymologic - genetics</subject><subject>Heart-Assist Devices</subject><subject>Humans</subject><subject>Male</subject><subject>Middle Aged</subject><subject>Myocardium - enzymology</subject><subject>Myocardium - metabolism</subject><subject>Myocardium - pathology</subject><subject>Nitric Oxide - metabolism</subject><subject>Nitric Oxide Synthase - genetics</subject><subject>Nitric Oxide Synthase Type II</subject><subject>Nitric Oxide Synthase Type III</subject><subject>Oligonucleotide Array Sequence Analysis</subject><subject>Reverse Transcriptase Polymerase Chain Reaction</subject><subject>Ventricular Dysfunction, Left - genetics</subject><subject>Ventricular Dysfunction, Left - metabolism</subject><subject>Ventricular Dysfunction, Left - pathology</subject><subject>Ventricular Remodeling - genetics</subject><issn>1094-8341</issn><issn>1531-2267</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2003</creationdate><recordtype>article</recordtype><recordid>eNqFkU9vFCEYh4nR2Fr9CoZ48DYrfwZm1otpGmubNPFSz4SBl10MM4zAtN1vX9bdxqTGeIKQ5_m9wA-hD5SsKBXs07zdZR_DBqY4epNXhBDGVowQ_gKdUsFpw5jsXtY9WbdNz1t6gt7k_JMQ2na9eI1OKOtZ24ruFMF5KJB08XHKODpcQwHDw5wg1xkT9hN22gc_bfC4i0Yn65cRuxhCvN8fBnAF38FUkjdL0Anr6uWCLdx5Azgv8xxTeYteOR0yvDuuZ-jH5dfbi6vm5vu364vzm8YIykrDaU8EZ2tppLBSMGvWsIbWDQ5AdwYsZ_WlklrKqdVyGAYxGMOJ5lxKxxg_Qx8PuXOKvxbIRY0-GwhBTxCXrDouBakB_wVp37e0Y6SCnw-gSTHnBE7NyY867RQlat-GetaG-t2G2rdR5ffHKcswgv2jHr-_AvwAbP1me-8TPKXFze6vYNoqrpjYX_7Lv63LJYRbeCjP9SdbzdbxR_IcuSY</recordid><startdate>20030815</startdate><enddate>20030815</enddate><creator>Chen, YingJie</creator><creator>Park, Soon</creator><creator>Li, Yunfang</creator><creator>Missov, Emil</creator><creator>Hou, Mingxiao</creator><creator>Han, Xinqiang</creator><creator>Hall, Jennifer L</creator><creator>Miller, Leslie W</creator><creator>Bache, Robert J</creator><general>Am Physiological Soc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>7X8</scope></search><sort><creationdate>20030815</creationdate><title>Alterations of gene expression in failing myocardium following left ventricular assist device support</title><author>Chen, YingJie ; Park, Soon ; Li, Yunfang ; Missov, Emil ; Hou, Mingxiao ; Han, Xinqiang ; Hall, Jennifer L ; Miller, Leslie W ; Bache, Robert J</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c512t-318053296c65d652dc9e9e4fbfeea7ced3202261d131da6bbb5bcc30a3366f223</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2003</creationdate><topic>Adult</topic><topic>Blotting, Western</topic><topic>Cardiomyopathy, Dilated - genetics</topic><topic>Cardiomyopathy, Dilated - metabolism</topic><topic>Cardiomyopathy, Dilated - pathology</topic><topic>Female</topic><topic>Gene Expression Profiling</topic><topic>Gene Expression Regulation - genetics</topic><topic>Gene Expression Regulation, Enzymologic - genetics</topic><topic>Heart-Assist Devices</topic><topic>Humans</topic><topic>Male</topic><topic>Middle Aged</topic><topic>Myocardium - enzymology</topic><topic>Myocardium - metabolism</topic><topic>Myocardium - pathology</topic><topic>Nitric Oxide - metabolism</topic><topic>Nitric Oxide Synthase - genetics</topic><topic>Nitric Oxide Synthase Type II</topic><topic>Nitric Oxide Synthase Type III</topic><topic>Oligonucleotide Array Sequence Analysis</topic><topic>Reverse Transcriptase Polymerase Chain Reaction</topic><topic>Ventricular Dysfunction, Left - genetics</topic><topic>Ventricular Dysfunction, Left - metabolism</topic><topic>Ventricular Dysfunction, Left - pathology</topic><topic>Ventricular Remodeling - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chen, YingJie</creatorcontrib><creatorcontrib>Park, Soon</creatorcontrib><creatorcontrib>Li, Yunfang</creatorcontrib><creatorcontrib>Missov, Emil</creatorcontrib><creatorcontrib>Hou, Mingxiao</creatorcontrib><creatorcontrib>Han, Xinqiang</creatorcontrib><creatorcontrib>Hall, Jennifer L</creatorcontrib><creatorcontrib>Miller, Leslie W</creatorcontrib><creatorcontrib>Bache, Robert J</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Physiological genomics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chen, YingJie</au><au>Park, Soon</au><au>Li, Yunfang</au><au>Missov, Emil</au><au>Hou, Mingxiao</au><au>Han, Xinqiang</au><au>Hall, Jennifer L</au><au>Miller, Leslie W</au><au>Bache, Robert J</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Alterations of gene expression in failing myocardium following left ventricular assist device support</atitle><jtitle>Physiological genomics</jtitle><addtitle>Physiol Genomics</addtitle><date>2003-08-15</date><risdate>2003</risdate><volume>14</volume><issue>3</issue><spage>251</spage><epage>260</epage><pages>251-260</pages><issn>1094-8341</issn><eissn>1531-2267</eissn><abstract>Departments of Medicine (Cardiovascular Division) and Surgery, University of Minnesota Health Sciences Center, Minneapolis, Minnesota 55455
Chronic unloading of the failing heart with a left ventricular assist device (LVAD) can decrease cardiac mass and myocyte size and has the potential to improve contractile function. To study the effect of chronic ventricular unloading on myocardial gene expression, a microarray (U133A, Affymetrix) profiling gene expression was compared before and after LVAD support in seven patients with idiopathic dilated cardiomyopathy and end-stage heart failure. On average, 1,374 ± 155 genes were reported as "increased" and 1,629 ± 45 as "decreased" after LVAD support. A total of 130 gene transcripts achieved the strict criteria for upregulation and 49 gene transcripts for downregulation after LVAD support. Upregulated genes included a large proportion of transcription factors, genes related to cell growth/apoptosis/DNA repair, cell structure proteins, metabolism, and cell signaling/communication. LVAD support resulted in downregulation of genes for a group of cytokines. To validate the array data, 10 altered genes were confirmed by real-time RT-PCR. Further study showed that the phosphoinositide-3-kinase-forkhead protein pathway and proteins related to nitric oxide synthesis, including eNOS and dimethylarginine dimethylaminohydrolase isoform 1 (DDAH1, an enzyme regulating endogenous nitric oxide synthase activity), were significantly increased during the cardiac remodeling process. Increased eNOS and DDAH1 expression after LVAD support may contribute to improved endothelial function of the failing hearts.
congestive heart failure; microarray; gene profiling; dilated cardiomyopathy</abstract><cop>United States</cop><pub>Am Physiological Soc</pub><pmid>12824457</pmid><doi>10.1152/physiolgenomics.00022.2003</doi><tpages>10</tpages></addata></record> |
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subjects | Adult Blotting, Western Cardiomyopathy, Dilated - genetics Cardiomyopathy, Dilated - metabolism Cardiomyopathy, Dilated - pathology Female Gene Expression Profiling Gene Expression Regulation - genetics Gene Expression Regulation, Enzymologic - genetics Heart-Assist Devices Humans Male Middle Aged Myocardium - enzymology Myocardium - metabolism Myocardium - pathology Nitric Oxide - metabolism Nitric Oxide Synthase - genetics Nitric Oxide Synthase Type II Nitric Oxide Synthase Type III Oligonucleotide Array Sequence Analysis Reverse Transcriptase Polymerase Chain Reaction Ventricular Dysfunction, Left - genetics Ventricular Dysfunction, Left - metabolism Ventricular Dysfunction, Left - pathology Ventricular Remodeling - genetics |
title | Alterations of gene expression in failing myocardium following left ventricular assist device support |
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