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Complete mitochondrial DNA genome of Pseudobagrus medianalis (Siluriformes: Bagridae)
The complete mitochondrial genome was sequenced from the freshwater fish, Pseudobagrus medianalis (Siluriformes: Bagridae) in this study. The genome sequence was 16,647 bp in length, and the gene order and contents were identical with the bagridae fishes. The mitochondrial genome contains 13 protein...
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Published in: | Mitochondrial DNA. Part A. DNA mapping, sequencing, and analysis sequencing, and analysis, 2016-01, Vol.27 (1), p.587-588 |
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description | The complete mitochondrial genome was sequenced from the freshwater fish, Pseudobagrus medianalis (Siluriformes: Bagridae) in this study. The genome sequence was 16,647 bp in length, and the gene order and contents were identical with the bagridae fishes. The mitochondrial genome contains 13 protein-coding genes, 2 ribosomal RNAs, 22 transfer RNAs and 2 non-coding regions (control region and origin of light-strand replication). All genes were encoded on the heavy strain except for ND6 and eight tRNA genes. The overall base composition is 25.7% A, 30.9% T, 28.0% G, 15.4% C, with an A+T bias of 56.6%. The complete mitogenome data provides useful genetic markers for the studies on the molecular identification, population genetics, phylogenetic analysis and conservation genetics. |
doi_str_mv | 10.3109/19401736.2014.908357 |
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The genome sequence was 16,647 bp in length, and the gene order and contents were identical with the bagridae fishes. The mitochondrial genome contains 13 protein-coding genes, 2 ribosomal RNAs, 22 transfer RNAs and 2 non-coding regions (control region and origin of light-strand replication). All genes were encoded on the heavy strain except for ND6 and eight tRNA genes. The overall base composition is 25.7% A, 30.9% T, 28.0% G, 15.4% C, with an A+T bias of 56.6%. The complete mitogenome data provides useful genetic markers for the studies on the molecular identification, population genetics, phylogenetic analysis and conservation genetics.</description><identifier>ISSN: 2470-1394</identifier><identifier>EISSN: 2470-1408</identifier><identifier>DOI: 10.3109/19401736.2014.908357</identifier><identifier>PMID: 24724973</identifier><language>eng</language><publisher>England: Taylor & Francis</publisher><subject>Animals ; Bagridae ; Base Composition - genetics ; Base Sequence ; Catfishes - genetics ; DNA, Mitochondrial - genetics ; Genome, Mitochondrial ; mitochondrial genome ; Pseudobagrus medianalis ; RNA, Transfer - genetics ; Siluriformes</subject><ispartof>Mitochondrial DNA. Part A. 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The complete mitogenome data provides useful genetic markers for the studies on the molecular identification, population genetics, phylogenetic analysis and conservation genetics.</description><subject>Animals</subject><subject>Bagridae</subject><subject>Base Composition - genetics</subject><subject>Base Sequence</subject><subject>Catfishes - genetics</subject><subject>DNA, Mitochondrial - genetics</subject><subject>Genome, Mitochondrial</subject><subject>mitochondrial genome</subject><subject>Pseudobagrus medianalis</subject><subject>RNA, Transfer - genetics</subject><subject>Siluriformes</subject><issn>2470-1394</issn><issn>2470-1408</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNp9kEtLAzEQgIMoWqr_QGSPemhNmjTZeJFan1BUUM9hujvRSHZTk12k_95daj16moH55vURcszomDOqz5kWlCkuxxPKxFjTnE_VDhlMhKIjJmi-u825FgfkKKVPSimTXCnN98lBV5sIrfiAvM1DtfLYYFa5JhQfoS6jA59dP86yd6xDhVmw2XPCtgxLeI9tyiosHdTgXcpOX5xvo7MhVpgusqsOcCXg2SHZs-ATHv3GIXm7vXmd348WT3cP89liVHDJmxEiVQDa6lzIiS25tLbo7wTLZWlBSpRsypSkqISCZUHLXGqJOZtKqTUHPiSnm7mrGL5aTI2pXCrQe6gxtMkwJbRkvKM7VGzQIoaUIlqziq6CuDaMmt6p2To1vVOzcdq1nfxuaJfd439NW4MdcLkBXN1rgO8QfWkaWPsQbYS6cKkf_8-KH0F0hOI</recordid><startdate>20160102</startdate><enddate>20160102</enddate><creator>Liang, Hong-wei</creator><creator>Li, Zhong</creator><creator>Zou, Gui-wei</creator><creator>Shi, Ming-yan</creator><general>Taylor & Francis</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20160102</creationdate><title>Complete mitochondrial DNA genome of Pseudobagrus medianalis (Siluriformes: Bagridae)</title><author>Liang, Hong-wei ; Li, Zhong ; Zou, Gui-wei ; Shi, Ming-yan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c363t-ee07aa9f98462fd36ffc0001af36dfa66e6151760e747abc0d8696e81566993a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Animals</topic><topic>Bagridae</topic><topic>Base Composition - genetics</topic><topic>Base Sequence</topic><topic>Catfishes - genetics</topic><topic>DNA, Mitochondrial - genetics</topic><topic>Genome, Mitochondrial</topic><topic>mitochondrial genome</topic><topic>Pseudobagrus medianalis</topic><topic>RNA, Transfer - genetics</topic><topic>Siluriformes</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Liang, Hong-wei</creatorcontrib><creatorcontrib>Li, Zhong</creatorcontrib><creatorcontrib>Zou, Gui-wei</creatorcontrib><creatorcontrib>Shi, Ming-yan</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Mitochondrial DNA. 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subjects | Animals Bagridae Base Composition - genetics Base Sequence Catfishes - genetics DNA, Mitochondrial - genetics Genome, Mitochondrial mitochondrial genome Pseudobagrus medianalis RNA, Transfer - genetics Siluriformes |
title | Complete mitochondrial DNA genome of Pseudobagrus medianalis (Siluriformes: Bagridae) |
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