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Hospital-Based Surveillance of Respiratory Viruses Among Children Under Five Years of Age with ARI and SARI in Eastern UP, India
Acute respiratory infections (ARIs) are a leading cause of death in children under five globally. The seasonal trends and profiles of respiratory viruses vary by region and season. Due to limited information and the population's vulnerability, we conducted the hospital-based surveillance of res...
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Published in: | Viruses 2024-12, Vol.17 (1), p.27 |
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creator | Deval, Hirawati Srivastava, Mitali Srivastava, Neha Kumar, Niraj Agarwal, Aman Potdar, Varsha Mehta, Anita Sharma, Bhoopendra Beniwal, Rohit Singh, Rajeev Singh, Amresh Kumar Gaur, Vivek Mittal, Mahima Dwivedi, Gaurav Raj Behera, Sthita Pragnya Kavathekar, Asif Prajapati, Sanjay Yadav, Sachin Gautam, Dipti Kumar, Nalin Iqbal, Asif Kant, Rajni Murhekar, Manoj |
description | Acute respiratory infections (ARIs) are a leading cause of death in children under five globally. The seasonal trends and profiles of respiratory viruses vary by region and season. Due to limited information and the population's vulnerability, we conducted the hospital-based surveillance of respiratory viruses in Eastern Uttar Pradesh. Throat and nasal swabs were collected from outpatients and inpatients in the Department of Paediatrics, Baba Raghav Das (BRD) Medical College, Gorakhpur, between May 2022 and April 2023. A total of 943 samples from children aged 1 to 60 months were tested using multiplex real-time PCR for respiratory viruses in cases of ARI and SARI. Out of 943 samples tested, the highest positivity was found for parainfluenza virus [105 (11.13%) PIV-1 (79), PIV-2 (18), PIV-4 (18)], followed by adenovirus [82 (8.7%), RSV-B, [68 (7.21%)], influenza-A [46(4.9%): H1N1 = 29, H3N2 = 14), SARS CoV-2 [28 (3%)], hMPV [13(1.4%), RSV-A [4 (0.42%), and influenza-B (Victoria lineage) 1 (0.10%). The maximum positivity of respiratory viruses was seen in children between 1 to 12 months. The wide variation in prevalence of these respiratory viruses was seen in different seasons. This study enhances understanding of the seasonal and clinical trends of respiratory virus circulation and co-infections in Eastern Uttar Pradesh. The findings highlight the importance of targeted interventions to reduce the burden of respiratory infections in this region. |
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The seasonal trends and profiles of respiratory viruses vary by region and season. Due to limited information and the population's vulnerability, we conducted the hospital-based surveillance of respiratory viruses in Eastern Uttar Pradesh. Throat and nasal swabs were collected from outpatients and inpatients in the Department of Paediatrics, Baba Raghav Das (BRD) Medical College, Gorakhpur, between May 2022 and April 2023. A total of 943 samples from children aged 1 to 60 months were tested using multiplex real-time PCR for respiratory viruses in cases of ARI and SARI. Out of 943 samples tested, the highest positivity was found for parainfluenza virus [105 (11.13%) PIV-1 (79), PIV-2 (18), PIV-4 (18)], followed by adenovirus [82 (8.7%), RSV-B, [68 (7.21%)], influenza-A [46(4.9%): H1N1 = 29, H3N2 = 14), SARS CoV-2 [28 (3%)], hMPV [13(1.4%), RSV-A [4 (0.42%), and influenza-B (Victoria lineage) 1 (0.10%). The maximum positivity of respiratory viruses was seen in children between 1 to 12 months. The wide variation in prevalence of these respiratory viruses was seen in different seasons. This study enhances understanding of the seasonal and clinical trends of respiratory virus circulation and co-infections in Eastern Uttar Pradesh. The findings highlight the importance of targeted interventions to reduce the burden of respiratory infections in this region.</description><identifier>ISSN: 1999-4915</identifier><identifier>EISSN: 1999-4915</identifier><identifier>DOI: 10.3390/v17010027</identifier><identifier>PMID: 39861815</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Adenoviruses ; Age ; ARI ; Child, Preschool ; Children ; Coinfection - epidemiology ; Coinfection - virology ; Female ; Fever ; Hospitals ; human metapneumovirus (hMPV) ; Humans ; India - epidemiology ; Infant ; Infections ; Influenza ; Male ; Molecular biology ; Parainfluenza ; parainfluenza virus (PIV) ; Pathogens ; Patients ; Pediatrics ; Pneumonia ; Prevalence ; Public health ; Regression analysis ; Respiratory diseases ; Respiratory syncytial virus ; respiratory syncytial virus (RSV) ; Respiratory tract infection ; Respiratory Tract Infections - epidemiology ; Respiratory Tract Infections - virology ; Seasons ; severe acute respiratory infection ; Severe acute respiratory syndrome coronavirus 2 ; Statistical analysis ; Surveillance ; Thermal cycling ; under 5 children ; Viral infections ; Viruses ; Viruses - classification ; Viruses - genetics ; Viruses - isolation & purification</subject><ispartof>Viruses, 2024-12, Vol.17 (1), p.27</ispartof><rights>2024 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). 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The maximum positivity of respiratory viruses was seen in children between 1 to 12 months. The wide variation in prevalence of these respiratory viruses was seen in different seasons. This study enhances understanding of the seasonal and clinical trends of respiratory virus circulation and co-infections in Eastern Uttar Pradesh. The findings highlight the importance of targeted interventions to reduce the burden of respiratory infections in this region.</description><subject>Adenoviruses</subject><subject>Age</subject><subject>ARI</subject><subject>Child, Preschool</subject><subject>Children</subject><subject>Coinfection - epidemiology</subject><subject>Coinfection - virology</subject><subject>Female</subject><subject>Fever</subject><subject>Hospitals</subject><subject>human metapneumovirus (hMPV)</subject><subject>Humans</subject><subject>India - epidemiology</subject><subject>Infant</subject><subject>Infections</subject><subject>Influenza</subject><subject>Male</subject><subject>Molecular biology</subject><subject>Parainfluenza</subject><subject>parainfluenza virus (PIV)</subject><subject>Pathogens</subject><subject>Patients</subject><subject>Pediatrics</subject><subject>Pneumonia</subject><subject>Prevalence</subject><subject>Public health</subject><subject>Regression analysis</subject><subject>Respiratory diseases</subject><subject>Respiratory syncytial virus</subject><subject>respiratory syncytial virus (RSV)</subject><subject>Respiratory tract infection</subject><subject>Respiratory Tract Infections - epidemiology</subject><subject>Respiratory Tract Infections - virology</subject><subject>Seasons</subject><subject>severe acute respiratory infection</subject><subject>Severe acute respiratory syndrome coronavirus 2</subject><subject>Statistical analysis</subject><subject>Surveillance</subject><subject>Thermal cycling</subject><subject>under 5 children</subject><subject>Viral infections</subject><subject>Viruses</subject><subject>Viruses - classification</subject><subject>Viruses - genetics</subject><subject>Viruses - isolation & purification</subject><issn>1999-4915</issn><issn>1999-4915</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>COVID</sourceid><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNpdklFrFDEQxxdRbK0--AUk4IuCq8lmN9k8yXm09qCgVCv4FGazs3c59pIz2b3St350s716tD5lyPzmx59hsuw1ox85V_TTjknKKC3kk-yYKaXyUrHq6YP6KHsR45pSIRSVz7MjrmrBalYdZ7fnPm7tAH3-BSK25McYdmj7HpxB4jtyiakdYPDhhvyyYYwYyWzj3ZLMV7ZvAzpy5VoM5MzukPxGCHEamy2RXNthRWaXCwIueafCOnIKccCQhr5_IAvXWniZPeugj_jq_j3Jrs5Of87P84tvXxfz2UVuOGMsl5xXHXDFm6akQlW1gQZEA6YWyIGKxhSM1onhrJEo0BSqKpXgrQKJqhT8JFvsva2Htd4Gu4Fwoz1Yfffhw1JDGKzpUZe1bKCDsqBMllUNNedtwcHwThaKUkiuz3vXdmw22Bp0Q4D-kfRxx9mVXvqdZkyKFKZKhnf3huD_jBgHvbHR4LR39GPUnFWqpinBFPztf-jaj8GlXd1RgikuaaLe7ykTfIwBu0MaRvV0JPpwJIl98zD-gfx3Ffwv3A-06g</recordid><startdate>20241228</startdate><enddate>20241228</enddate><creator>Deval, Hirawati</creator><creator>Srivastava, Mitali</creator><creator>Srivastava, Neha</creator><creator>Kumar, Niraj</creator><creator>Agarwal, Aman</creator><creator>Potdar, Varsha</creator><creator>Mehta, Anita</creator><creator>Sharma, Bhoopendra</creator><creator>Beniwal, Rohit</creator><creator>Singh, Rajeev</creator><creator>Singh, Amresh Kumar</creator><creator>Gaur, Vivek</creator><creator>Mittal, Mahima</creator><creator>Dwivedi, Gaurav Raj</creator><creator>Behera, Sthita Pragnya</creator><creator>Kavathekar, Asif</creator><creator>Prajapati, Sanjay</creator><creator>Yadav, Sachin</creator><creator>Gautam, Dipti</creator><creator>Kumar, Nalin</creator><creator>Iqbal, Asif</creator><creator>Kant, Rajni</creator><creator>Murhekar, Manoj</creator><general>MDPI AG</general><general>MDPI</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>COVID</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0003-4300-9956</orcidid><orcidid>https://orcid.org/0000-0001-9683-6571</orcidid><orcidid>https://orcid.org/0000-0002-1517-5757</orcidid><orcidid>https://orcid.org/0000-0001-7671-1202</orcidid><orcidid>https://orcid.org/0000-0002-7535-7878</orcidid><orcidid>https://orcid.org/0000-0003-4906-7858</orcidid><orcidid>https://orcid.org/0000-0001-7597-5601</orcidid><orcidid>https://orcid.org/0000-0002-3179-7003</orcidid><orcidid>https://orcid.org/0000-0002-7361-608X</orcidid></search><sort><creationdate>20241228</creationdate><title>Hospital-Based Surveillance of Respiratory Viruses Among Children Under Five Years of Age with ARI and SARI in Eastern UP, India</title><author>Deval, Hirawati ; Srivastava, Mitali ; Srivastava, Neha ; Kumar, Niraj ; Agarwal, Aman ; Potdar, Varsha ; Mehta, Anita ; Sharma, Bhoopendra ; Beniwal, Rohit ; Singh, Rajeev ; Singh, Amresh Kumar ; Gaur, Vivek ; Mittal, Mahima ; Dwivedi, Gaurav Raj ; Behera, Sthita Pragnya ; Kavathekar, Asif ; Prajapati, Sanjay ; Yadav, Sachin ; Gautam, Dipti ; Kumar, Nalin ; Iqbal, Asif ; Kant, Rajni ; Murhekar, Manoj</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3111-7335fa393bb406958caba6bac86e3a06bc210835f31b7e6ec2954963d9a7e9463</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Adenoviruses</topic><topic>Age</topic><topic>ARI</topic><topic>Child, Preschool</topic><topic>Children</topic><topic>Coinfection - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Viruses</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Deval, Hirawati</au><au>Srivastava, Mitali</au><au>Srivastava, Neha</au><au>Kumar, Niraj</au><au>Agarwal, Aman</au><au>Potdar, Varsha</au><au>Mehta, Anita</au><au>Sharma, Bhoopendra</au><au>Beniwal, Rohit</au><au>Singh, Rajeev</au><au>Singh, Amresh Kumar</au><au>Gaur, Vivek</au><au>Mittal, Mahima</au><au>Dwivedi, Gaurav Raj</au><au>Behera, Sthita Pragnya</au><au>Kavathekar, Asif</au><au>Prajapati, Sanjay</au><au>Yadav, Sachin</au><au>Gautam, Dipti</au><au>Kumar, Nalin</au><au>Iqbal, Asif</au><au>Kant, Rajni</au><au>Murhekar, Manoj</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Hospital-Based Surveillance of Respiratory Viruses Among Children Under Five Years of Age with ARI and SARI in Eastern UP, India</atitle><jtitle>Viruses</jtitle><addtitle>Viruses</addtitle><date>2024-12-28</date><risdate>2024</risdate><volume>17</volume><issue>1</issue><spage>27</spage><pages>27-</pages><issn>1999-4915</issn><eissn>1999-4915</eissn><abstract>Acute respiratory infections (ARIs) are a leading cause of death in children under five globally. The seasonal trends and profiles of respiratory viruses vary by region and season. Due to limited information and the population's vulnerability, we conducted the hospital-based surveillance of respiratory viruses in Eastern Uttar Pradesh. Throat and nasal swabs were collected from outpatients and inpatients in the Department of Paediatrics, Baba Raghav Das (BRD) Medical College, Gorakhpur, between May 2022 and April 2023. A total of 943 samples from children aged 1 to 60 months were tested using multiplex real-time PCR for respiratory viruses in cases of ARI and SARI. Out of 943 samples tested, the highest positivity was found for parainfluenza virus [105 (11.13%) PIV-1 (79), PIV-2 (18), PIV-4 (18)], followed by adenovirus [82 (8.7%), RSV-B, [68 (7.21%)], influenza-A [46(4.9%): H1N1 = 29, H3N2 = 14), SARS CoV-2 [28 (3%)], hMPV [13(1.4%), RSV-A [4 (0.42%), and influenza-B (Victoria lineage) 1 (0.10%). The maximum positivity of respiratory viruses was seen in children between 1 to 12 months. The wide variation in prevalence of these respiratory viruses was seen in different seasons. This study enhances understanding of the seasonal and clinical trends of respiratory virus circulation and co-infections in Eastern Uttar Pradesh. The findings highlight the importance of targeted interventions to reduce the burden of respiratory infections in this region.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>39861815</pmid><doi>10.3390/v17010027</doi><orcidid>https://orcid.org/0000-0003-4300-9956</orcidid><orcidid>https://orcid.org/0000-0001-9683-6571</orcidid><orcidid>https://orcid.org/0000-0002-1517-5757</orcidid><orcidid>https://orcid.org/0000-0001-7671-1202</orcidid><orcidid>https://orcid.org/0000-0002-7535-7878</orcidid><orcidid>https://orcid.org/0000-0003-4906-7858</orcidid><orcidid>https://orcid.org/0000-0001-7597-5601</orcidid><orcidid>https://orcid.org/0000-0002-3179-7003</orcidid><orcidid>https://orcid.org/0000-0002-7361-608X</orcidid><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1999-4915 |
ispartof | Viruses, 2024-12, Vol.17 (1), p.27 |
issn | 1999-4915 1999-4915 |
language | eng |
recordid | cdi_crossref_primary_10_3390_v17010027 |
source | Publicly Available Content (ProQuest); PubMed Central; Coronavirus Research Database |
subjects | Adenoviruses Age ARI Child, Preschool Children Coinfection - epidemiology Coinfection - virology Female Fever Hospitals human metapneumovirus (hMPV) Humans India - epidemiology Infant Infections Influenza Male Molecular biology Parainfluenza parainfluenza virus (PIV) Pathogens Patients Pediatrics Pneumonia Prevalence Public health Regression analysis Respiratory diseases Respiratory syncytial virus respiratory syncytial virus (RSV) Respiratory tract infection Respiratory Tract Infections - epidemiology Respiratory Tract Infections - virology Seasons severe acute respiratory infection Severe acute respiratory syndrome coronavirus 2 Statistical analysis Surveillance Thermal cycling under 5 children Viral infections Viruses Viruses - classification Viruses - genetics Viruses - isolation & purification |
title | Hospital-Based Surveillance of Respiratory Viruses Among Children Under Five Years of Age with ARI and SARI in Eastern UP, India |
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