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Hospital-Based Surveillance of Respiratory Viruses Among Children Under Five Years of Age with ARI and SARI in Eastern UP, India

Acute respiratory infections (ARIs) are a leading cause of death in children under five globally. The seasonal trends and profiles of respiratory viruses vary by region and season. Due to limited information and the population's vulnerability, we conducted the hospital-based surveillance of res...

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Published in:Viruses 2024-12, Vol.17 (1), p.27
Main Authors: Deval, Hirawati, Srivastava, Mitali, Srivastava, Neha, Kumar, Niraj, Agarwal, Aman, Potdar, Varsha, Mehta, Anita, Sharma, Bhoopendra, Beniwal, Rohit, Singh, Rajeev, Singh, Amresh Kumar, Gaur, Vivek, Mittal, Mahima, Dwivedi, Gaurav Raj, Behera, Sthita Pragnya, Kavathekar, Asif, Prajapati, Sanjay, Yadav, Sachin, Gautam, Dipti, Kumar, Nalin, Iqbal, Asif, Kant, Rajni, Murhekar, Manoj
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creator Deval, Hirawati
Srivastava, Mitali
Srivastava, Neha
Kumar, Niraj
Agarwal, Aman
Potdar, Varsha
Mehta, Anita
Sharma, Bhoopendra
Beniwal, Rohit
Singh, Rajeev
Singh, Amresh Kumar
Gaur, Vivek
Mittal, Mahima
Dwivedi, Gaurav Raj
Behera, Sthita Pragnya
Kavathekar, Asif
Prajapati, Sanjay
Yadav, Sachin
Gautam, Dipti
Kumar, Nalin
Iqbal, Asif
Kant, Rajni
Murhekar, Manoj
description Acute respiratory infections (ARIs) are a leading cause of death in children under five globally. The seasonal trends and profiles of respiratory viruses vary by region and season. Due to limited information and the population's vulnerability, we conducted the hospital-based surveillance of respiratory viruses in Eastern Uttar Pradesh. Throat and nasal swabs were collected from outpatients and inpatients in the Department of Paediatrics, Baba Raghav Das (BRD) Medical College, Gorakhpur, between May 2022 and April 2023. A total of 943 samples from children aged 1 to 60 months were tested using multiplex real-time PCR for respiratory viruses in cases of ARI and SARI. Out of 943 samples tested, the highest positivity was found for parainfluenza virus [105 (11.13%) PIV-1 (79), PIV-2 (18), PIV-4 (18)], followed by adenovirus [82 (8.7%), RSV-B, [68 (7.21%)], influenza-A [46(4.9%): H1N1 = 29, H3N2 = 14), SARS CoV-2 [28 (3%)], hMPV [13(1.4%), RSV-A [4 (0.42%), and influenza-B (Victoria lineage) 1 (0.10%). The maximum positivity of respiratory viruses was seen in children between 1 to 12 months. The wide variation in prevalence of these respiratory viruses was seen in different seasons. This study enhances understanding of the seasonal and clinical trends of respiratory virus circulation and co-infections in Eastern Uttar Pradesh. The findings highlight the importance of targeted interventions to reduce the burden of respiratory infections in this region.
doi_str_mv 10.3390/v17010027
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Srivastava, Mitali ; Srivastava, Neha ; Kumar, Niraj ; Agarwal, Aman ; Potdar, Varsha ; Mehta, Anita ; Sharma, Bhoopendra ; Beniwal, Rohit ; Singh, Rajeev ; Singh, Amresh Kumar ; Gaur, Vivek ; Mittal, Mahima ; Dwivedi, Gaurav Raj ; Behera, Sthita Pragnya ; Kavathekar, Asif ; Prajapati, Sanjay ; Yadav, Sachin ; Gautam, Dipti ; Kumar, Nalin ; Iqbal, Asif ; Kant, Rajni ; Murhekar, Manoj</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3111-7335fa393bb406958caba6bac86e3a06bc210835f31b7e6ec2954963d9a7e9463</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Adenoviruses</topic><topic>Age</topic><topic>ARI</topic><topic>Child, Preschool</topic><topic>Children</topic><topic>Coinfection - epidemiology</topic><topic>Coinfection - virology</topic><topic>Female</topic><topic>Fever</topic><topic>Hospitals</topic><topic>human metapneumovirus (hMPV)</topic><topic>Humans</topic><topic>India - epidemiology</topic><topic>Infant</topic><topic>Infections</topic><topic>Influenza</topic><topic>Male</topic><topic>Molecular biology</topic><topic>Parainfluenza</topic><topic>parainfluenza virus (PIV)</topic><topic>Pathogens</topic><topic>Patients</topic><topic>Pediatrics</topic><topic>Pneumonia</topic><topic>Prevalence</topic><topic>Public health</topic><topic>Regression analysis</topic><topic>Respiratory diseases</topic><topic>Respiratory syncytial virus</topic><topic>respiratory syncytial virus (RSV)</topic><topic>Respiratory tract infection</topic><topic>Respiratory Tract Infections - epidemiology</topic><topic>Respiratory Tract Infections - virology</topic><topic>Seasons</topic><topic>severe acute respiratory infection</topic><topic>Severe acute respiratory syndrome coronavirus 2</topic><topic>Statistical analysis</topic><topic>Surveillance</topic><topic>Thermal cycling</topic><topic>under 5 children</topic><topic>Viral infections</topic><topic>Viruses</topic><topic>Viruses - classification</topic><topic>Viruses - genetics</topic><topic>Viruses - isolation &amp; 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Medical Complete (Alumni)</collection><collection>Biological Sciences</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Publicly Available Content (ProQuest)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Viruses</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Deval, Hirawati</au><au>Srivastava, Mitali</au><au>Srivastava, Neha</au><au>Kumar, Niraj</au><au>Agarwal, Aman</au><au>Potdar, Varsha</au><au>Mehta, Anita</au><au>Sharma, Bhoopendra</au><au>Beniwal, Rohit</au><au>Singh, Rajeev</au><au>Singh, Amresh Kumar</au><au>Gaur, Vivek</au><au>Mittal, Mahima</au><au>Dwivedi, Gaurav Raj</au><au>Behera, Sthita Pragnya</au><au>Kavathekar, Asif</au><au>Prajapati, Sanjay</au><au>Yadav, Sachin</au><au>Gautam, Dipti</au><au>Kumar, Nalin</au><au>Iqbal, Asif</au><au>Kant, Rajni</au><au>Murhekar, Manoj</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Hospital-Based Surveillance of Respiratory Viruses Among Children Under Five Years of Age with ARI and SARI in Eastern UP, India</atitle><jtitle>Viruses</jtitle><addtitle>Viruses</addtitle><date>2024-12-28</date><risdate>2024</risdate><volume>17</volume><issue>1</issue><spage>27</spage><pages>27-</pages><issn>1999-4915</issn><eissn>1999-4915</eissn><abstract>Acute respiratory infections (ARIs) are a leading cause of death in children under five globally. The seasonal trends and profiles of respiratory viruses vary by region and season. Due to limited information and the population's vulnerability, we conducted the hospital-based surveillance of respiratory viruses in Eastern Uttar Pradesh. Throat and nasal swabs were collected from outpatients and inpatients in the Department of Paediatrics, Baba Raghav Das (BRD) Medical College, Gorakhpur, between May 2022 and April 2023. A total of 943 samples from children aged 1 to 60 months were tested using multiplex real-time PCR for respiratory viruses in cases of ARI and SARI. Out of 943 samples tested, the highest positivity was found for parainfluenza virus [105 (11.13%) PIV-1 (79), PIV-2 (18), PIV-4 (18)], followed by adenovirus [82 (8.7%), RSV-B, [68 (7.21%)], influenza-A [46(4.9%): H1N1 = 29, H3N2 = 14), SARS CoV-2 [28 (3%)], hMPV [13(1.4%), RSV-A [4 (0.42%), and influenza-B (Victoria lineage) 1 (0.10%). The maximum positivity of respiratory viruses was seen in children between 1 to 12 months. The wide variation in prevalence of these respiratory viruses was seen in different seasons. This study enhances understanding of the seasonal and clinical trends of respiratory virus circulation and co-infections in Eastern Uttar Pradesh. The findings highlight the importance of targeted interventions to reduce the burden of respiratory infections in this region.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>39861815</pmid><doi>10.3390/v17010027</doi><orcidid>https://orcid.org/0000-0003-4300-9956</orcidid><orcidid>https://orcid.org/0000-0001-9683-6571</orcidid><orcidid>https://orcid.org/0000-0002-1517-5757</orcidid><orcidid>https://orcid.org/0000-0001-7671-1202</orcidid><orcidid>https://orcid.org/0000-0002-7535-7878</orcidid><orcidid>https://orcid.org/0000-0003-4906-7858</orcidid><orcidid>https://orcid.org/0000-0001-7597-5601</orcidid><orcidid>https://orcid.org/0000-0002-3179-7003</orcidid><orcidid>https://orcid.org/0000-0002-7361-608X</orcidid><oa>free_for_read</oa></addata></record>
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identifier ISSN: 1999-4915
ispartof Viruses, 2024-12, Vol.17 (1), p.27
issn 1999-4915
1999-4915
language eng
recordid cdi_crossref_primary_10_3390_v17010027
source Publicly Available Content (ProQuest); PubMed Central; Coronavirus Research Database
subjects Adenoviruses
Age
ARI
Child, Preschool
Children
Coinfection - epidemiology
Coinfection - virology
Female
Fever
Hospitals
human metapneumovirus (hMPV)
Humans
India - epidemiology
Infant
Infections
Influenza
Male
Molecular biology
Parainfluenza
parainfluenza virus (PIV)
Pathogens
Patients
Pediatrics
Pneumonia
Prevalence
Public health
Regression analysis
Respiratory diseases
Respiratory syncytial virus
respiratory syncytial virus (RSV)
Respiratory tract infection
Respiratory Tract Infections - epidemiology
Respiratory Tract Infections - virology
Seasons
severe acute respiratory infection
Severe acute respiratory syndrome coronavirus 2
Statistical analysis
Surveillance
Thermal cycling
under 5 children
Viral infections
Viruses
Viruses - classification
Viruses - genetics
Viruses - isolation & purification
title Hospital-Based Surveillance of Respiratory Viruses Among Children Under Five Years of Age with ARI and SARI in Eastern UP, India
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