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Quorum Sensing and Genetic Lineages in Carbapenem-Resistant Pseudomonas aeruginosa
Background: Carbapenem-resistant Pseudomonas aeruginosa (CRPA) has become a major global concern. Quorum sensing (QS) regulates the expression of biofilm formation genes and virulence factors. Enterobacterial repetitive intergenic consensus polymerase chain reaction (ERIC-PCR) is widely used in epid...
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Published in: | Jundishapur journal of microbiology 2024-10, Vol.17 (10) |
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description | Background: Carbapenem-resistant Pseudomonas aeruginosa (CRPA) has become a major global concern. Quorum sensing (QS) regulates the expression of biofilm formation genes and virulence factors. Enterobacterial repetitive intergenic consensus polymerase chain reaction (ERIC-PCR) is widely used in epidemiological molecular studies. Objectives: The purpose of the present study was to determine the QS characteristics and genetic relatedness of CRPA. Methods: A total of 57 non-duplicative CRPA isolates were collected. A microtiter plate assay was used to assess biofilm formation. After DNA extraction, PCR was performed to detect resistance elements and QS-encoded genes. Enterobacterial repetitive intergenic ERIC-PCR was conducted using specific primers. Results: The biofilm formation assay revealed that 10.5%, 19.3%, and 70.2% of isolates formed weak, moderate, and strong biofilms, respectively. Of the isolates, 75.4%, 64.9%, 12.3%, and 8.7% carried the blaIMP, blaVIM, blaNDM, and blaKPC genes, respectively. Additionally, 73.7%, 7.0%, and 1.7% of CRPA isolates carried the blaOXA-48-like, blaOXA-23-like, and blaOXA-20/40-like genes, respectively. The prevalence of the lasR, lasI, rhlI, rhlR, aprR, aprA, and rhlAB genes were 100%, 96.5%, 92.9%, 89.5%, 84.2%, 73.6%, and 63.2%, respectively. Enterobacterial repetitive intergenic ERIC-PCR revealed eight distinct clusters (A, B, C, D, E, F, G, and H) using a similarity cut-off of ≥ 60%. Conclusions: The findings indicate a high prevalence of strong biofilm formation and quorum-sensing genes among CRPA isolates. The study highlights the importance of biofilm production and genetic diversity in CRPA isolates, underscoring the challenges in infection control and treatment strategies. |
doi_str_mv | 10.5812/jjm-156576 |
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Quorum sensing (QS) regulates the expression of biofilm formation genes and virulence factors. Enterobacterial repetitive intergenic consensus polymerase chain reaction (ERIC-PCR) is widely used in epidemiological molecular studies. Objectives: The purpose of the present study was to determine the QS characteristics and genetic relatedness of CRPA. Methods: A total of 57 non-duplicative CRPA isolates were collected. A microtiter plate assay was used to assess biofilm formation. After DNA extraction, PCR was performed to detect resistance elements and QS-encoded genes. Enterobacterial repetitive intergenic ERIC-PCR was conducted using specific primers. Results: The biofilm formation assay revealed that 10.5%, 19.3%, and 70.2% of isolates formed weak, moderate, and strong biofilms, respectively. Of the isolates, 75.4%, 64.9%, 12.3%, and 8.7% carried the blaIMP, blaVIM, blaNDM, and blaKPC genes, respectively. Additionally, 73.7%, 7.0%, and 1.7% of CRPA isolates carried the blaOXA-48-like, blaOXA-23-like, and blaOXA-20/40-like genes, respectively. The prevalence of the lasR, lasI, rhlI, rhlR, aprR, aprA, and rhlAB genes were 100%, 96.5%, 92.9%, 89.5%, 84.2%, 73.6%, and 63.2%, respectively. Enterobacterial repetitive intergenic ERIC-PCR revealed eight distinct clusters (A, B, C, D, E, F, G, and H) using a similarity cut-off of ≥ 60%. Conclusions: The findings indicate a high prevalence of strong biofilm formation and quorum-sensing genes among CRPA isolates. The study highlights the importance of biofilm production and genetic diversity in CRPA isolates, underscoring the challenges in infection control and treatment strategies.</description><identifier>ISSN: 2008-4161</identifier><identifier>EISSN: 2008-4161</identifier><identifier>DOI: 10.5812/jjm-156576</identifier><language>eng</language><ispartof>Jundishapur journal of microbiology, 2024-10, Vol.17 (10)</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c156t-d6d2d746fc24fd2383c91fd2ab2b1637654670b8471b1a4b4f981ad9afe7f1593</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27903,27904</link.rule.ids></links><search><creatorcontrib>Shafigh, Maryam</creatorcontrib><creatorcontrib>Pournajaf, Abazar</creatorcontrib><creatorcontrib>Izadi Amoli, Rabeeh</creatorcontrib><creatorcontrib>Yahyapour, Yousef</creatorcontrib><creatorcontrib>Kaboosi, Hami</creatorcontrib><title>Quorum Sensing and Genetic Lineages in Carbapenem-Resistant Pseudomonas aeruginosa</title><title>Jundishapur journal of microbiology</title><description>Background: Carbapenem-resistant Pseudomonas aeruginosa (CRPA) has become a major global concern. Quorum sensing (QS) regulates the expression of biofilm formation genes and virulence factors. Enterobacterial repetitive intergenic consensus polymerase chain reaction (ERIC-PCR) is widely used in epidemiological molecular studies. Objectives: The purpose of the present study was to determine the QS characteristics and genetic relatedness of CRPA. Methods: A total of 57 non-duplicative CRPA isolates were collected. A microtiter plate assay was used to assess biofilm formation. After DNA extraction, PCR was performed to detect resistance elements and QS-encoded genes. Enterobacterial repetitive intergenic ERIC-PCR was conducted using specific primers. Results: The biofilm formation assay revealed that 10.5%, 19.3%, and 70.2% of isolates formed weak, moderate, and strong biofilms, respectively. Of the isolates, 75.4%, 64.9%, 12.3%, and 8.7% carried the blaIMP, blaVIM, blaNDM, and blaKPC genes, respectively. Additionally, 73.7%, 7.0%, and 1.7% of CRPA isolates carried the blaOXA-48-like, blaOXA-23-like, and blaOXA-20/40-like genes, respectively. The prevalence of the lasR, lasI, rhlI, rhlR, aprR, aprA, and rhlAB genes were 100%, 96.5%, 92.9%, 89.5%, 84.2%, 73.6%, and 63.2%, respectively. Enterobacterial repetitive intergenic ERIC-PCR revealed eight distinct clusters (A, B, C, D, E, F, G, and H) using a similarity cut-off of ≥ 60%. Conclusions: The findings indicate a high prevalence of strong biofilm formation and quorum-sensing genes among CRPA isolates. The study highlights the importance of biofilm production and genetic diversity in CRPA isolates, underscoring the challenges in infection control and treatment strategies.</description><issn>2008-4161</issn><issn>2008-4161</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNpNkMFKxDAYhIMouKx78QlyFqJJmibpUYquCwV11XP50yQli02XpD349nZZD85lBgaG4UPoltH7UjP-cDgMhJWyVPICrTilmggm2eW_fI02OR_oSYpqwVdo_z6PaR7wh4s5xB5DtHjroptCh5sQHfQu4xBxDcnAcSkGsnc55AnihN-ym-04jBEyBpfmPsQxww268vCd3ebP1-jr-emzfiHN63ZXPzakW05OxErLrRLSd1x4ywtddBVbAhhumCyULIVU1GihmGEgjPCVZmAr8E55VlbFGt2dd7s05pycb48pDJB-WkbbE5B2AdKegRS_kotUMg</recordid><startdate>20241030</startdate><enddate>20241030</enddate><creator>Shafigh, Maryam</creator><creator>Pournajaf, Abazar</creator><creator>Izadi Amoli, Rabeeh</creator><creator>Yahyapour, Yousef</creator><creator>Kaboosi, Hami</creator><scope>AAYXX</scope><scope>CITATION</scope></search><sort><creationdate>20241030</creationdate><title>Quorum Sensing and Genetic Lineages in Carbapenem-Resistant Pseudomonas aeruginosa</title><author>Shafigh, Maryam ; Pournajaf, Abazar ; Izadi Amoli, Rabeeh ; Yahyapour, Yousef ; Kaboosi, Hami</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c156t-d6d2d746fc24fd2383c91fd2ab2b1637654670b8471b1a4b4f981ad9afe7f1593</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Shafigh, Maryam</creatorcontrib><creatorcontrib>Pournajaf, Abazar</creatorcontrib><creatorcontrib>Izadi Amoli, Rabeeh</creatorcontrib><creatorcontrib>Yahyapour, Yousef</creatorcontrib><creatorcontrib>Kaboosi, Hami</creatorcontrib><collection>CrossRef</collection><jtitle>Jundishapur journal of microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Shafigh, Maryam</au><au>Pournajaf, Abazar</au><au>Izadi Amoli, Rabeeh</au><au>Yahyapour, Yousef</au><au>Kaboosi, Hami</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Quorum Sensing and Genetic Lineages in Carbapenem-Resistant Pseudomonas aeruginosa</atitle><jtitle>Jundishapur journal of microbiology</jtitle><date>2024-10-30</date><risdate>2024</risdate><volume>17</volume><issue>10</issue><issn>2008-4161</issn><eissn>2008-4161</eissn><abstract>Background: Carbapenem-resistant Pseudomonas aeruginosa (CRPA) has become a major global concern. Quorum sensing (QS) regulates the expression of biofilm formation genes and virulence factors. Enterobacterial repetitive intergenic consensus polymerase chain reaction (ERIC-PCR) is widely used in epidemiological molecular studies. Objectives: The purpose of the present study was to determine the QS characteristics and genetic relatedness of CRPA. Methods: A total of 57 non-duplicative CRPA isolates were collected. A microtiter plate assay was used to assess biofilm formation. After DNA extraction, PCR was performed to detect resistance elements and QS-encoded genes. Enterobacterial repetitive intergenic ERIC-PCR was conducted using specific primers. Results: The biofilm formation assay revealed that 10.5%, 19.3%, and 70.2% of isolates formed weak, moderate, and strong biofilms, respectively. Of the isolates, 75.4%, 64.9%, 12.3%, and 8.7% carried the blaIMP, blaVIM, blaNDM, and blaKPC genes, respectively. Additionally, 73.7%, 7.0%, and 1.7% of CRPA isolates carried the blaOXA-48-like, blaOXA-23-like, and blaOXA-20/40-like genes, respectively. The prevalence of the lasR, lasI, rhlI, rhlR, aprR, aprA, and rhlAB genes were 100%, 96.5%, 92.9%, 89.5%, 84.2%, 73.6%, and 63.2%, respectively. Enterobacterial repetitive intergenic ERIC-PCR revealed eight distinct clusters (A, B, C, D, E, F, G, and H) using a similarity cut-off of ≥ 60%. Conclusions: The findings indicate a high prevalence of strong biofilm formation and quorum-sensing genes among CRPA isolates. The study highlights the importance of biofilm production and genetic diversity in CRPA isolates, underscoring the challenges in infection control and treatment strategies.</abstract><doi>10.5812/jjm-156576</doi><oa>free_for_read</oa></addata></record> |
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title | Quorum Sensing and Genetic Lineages in Carbapenem-Resistant Pseudomonas aeruginosa |
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