Complete Genome Sequences of Septoria linicola : A Resource for Studying a Damaging Flax Pathogen

Fungal genus causes diseases in a wide range of plants. Here, we report the first genome sequences of two strains of , the causal agent of the pasmo disease of flax ( ). The genome of the first strain, SE15195, was fully assembled in 16 chromosomes, while 35 unitigs were obtained for a second strain...

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Bibliographic Details
Published in:Molecular plant-microbe interactions 2023-01, Vol.36 (1), p.59-63
Main Authors: Lapalu, Nicolas, Simon, Adeline, Demenou, Boris, Paumier, Delphine, Guillot, Marie-Pierre, Gout, Lilian, Suffert, Frederic, Valade, Romain
Format: Article
Language:English
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Ascomycota - genetics
Chromosomes
DNA Transposable Elements
Environmental Sciences
Flax
Gene sequencing
genome
Genomes
Genomics
Life Sciences
Linum usitatissimum
Pasmo
Plant Diseases
Septoria linicola
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Summary:Fungal genus causes diseases in a wide range of plants. Here, we report the first genome sequences of two strains of , the causal agent of the pasmo disease of flax ( ). The genome of the first strain, SE15195, was fully assembled in 16 chromosomes, while 35 unitigs were obtained for a second strain, SE14017. Structural annotations predicted 13,096 and 13,085 protein-encoding genes and transposable elements content of 19.0 and 18.1% of the genome for SE15195 and SE14017, respectively. The four smaller chromosomes 13 to 16 show genomics features of potential accessory chromosomes. The assembly of these two genomes is a new resource for studying and improving management of pasmo. [Formula: see text] Copyright © 2022 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.
ISSN:0894-0282
1943-7706
DOI:10.1094/MPMI-09-22-0185-A