The complete mitochondrial genome of Triplophysa grahami Regan 1906 (Cypriniformes: Nemacheilidae) and phylogenetic analysis

Regan 1906 is a member of the family Nemacheilidae, Cypriniformes, and native loach in Yunnan. In this study, the complete mitochondrial genome (mitogenome) of Regan 1906 was firstly reported and analyzed. The mitogenome of Regan 1906 is 16,566 bp in length, including 13 protein-coding genes (PCGs),...

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Published in:Mitochondrial DNA. Part B. Resources 2024-09, Vol.9 (9), p.1190-1195
Main Authors: Xu, Mei, Zhang, Jian, Song, Jianyu, Zhang, Zifang, Wu, Junjie
Format: Article
Language:English
Subjects:
Base composition
Cypriniformes
Fishery sciences
Genes
Genetic analysis
Genetic testing
Genomes
Hypoxia
Mitochondrial DNA
mitogenome
Morphology
Nemacheilidae
phylogenetic analysis
Phylogenetics
Phylogeny
Protein composition
Proteins
Transfer RNA
Triplophysa
Triplophysa graham Regan 1906
Triplophysa grahami
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Zhang, Jian
Song, Jianyu
Zhang, Zifang
Wu, Junjie
description Regan 1906 is a member of the family Nemacheilidae, Cypriniformes, and native loach in Yunnan. In this study, the complete mitochondrial genome (mitogenome) of Regan 1906 was firstly reported and analyzed. The mitogenome of Regan 1906 is 16,566 bp in length, including 13 protein-coding genes (PCGs), 22 transfer RNAs (tRNAs), two ribosomal RNAs (rRNAs), and one control region (D-loop). The arrangement and orientation of protein coding genes and RNAs in Regan 1906 are identical to other species of Nemacheilidae. The base composition of Regan 1906 mitogenome was 29.25% A, 28.55% T, 25.03% C, and 17.17% G. The phylogenetic analysis based on the mitogenome showed that Regan 1906 belongs to the clade of genus and the monophyly of is identified. This study contributed valuable genetic data for Regan 1906 and explored the phylogenetic relationships in Nemacheilidae.
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source Taylor & Francis; Publicly Available Content Database; PubMed Central
subjects Base composition
Cypriniformes
Fishery sciences
Genes
Genetic analysis
Genetic testing
Genomes
Hypoxia
Mitochondrial DNA
mitogenome
Morphology
Nemacheilidae
phylogenetic analysis
Phylogenetics
Phylogeny
Protein composition
Proteins
Transfer RNA
Triplophysa
Triplophysa graham Regan 1906
Triplophysa grahami
title The complete mitochondrial genome of Triplophysa grahami Regan 1906 (Cypriniformes: Nemacheilidae) and phylogenetic analysis
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