Loading…
Spatial difference in phoD-harboring bacterial landscape between soils and sediments along the Yangtze River
[Display omitted] •Higher alkaline phosphatase activity was found for sediments rather than soils.•Community similarity decayed against higher geographical distance.•Different landscapes of phoD-harboring bacteria between soils and sediments.•Electrical conductivity shaping taxonomic and phylogeneti...
Saved in:
Published in: | Ecological indicators 2023-09, Vol.153, p.110447, Article 110447 |
---|---|
Main Authors: | , , , , , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that this one cites |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | |
---|---|
cites | cdi_FETCH-LOGICAL-c370t-8ec40f71d57b606c05abcbf19361aa0bd40231f7735939ff5cf2cfe74e8f14e43 |
container_end_page | |
container_issue | |
container_start_page | 110447 |
container_title | Ecological indicators |
container_volume | 153 |
creator | Yang, Yuyi Michael Gadd, Geoffrey Gu, Ji-Dong Zhang, Weihong Zhang, Quanfa Liu, Wenzhi Wan, Wenjie |
description | [Display omitted]
•Higher alkaline phosphatase activity was found for sediments rather than soils.•Community similarity decayed against higher geographical distance.•Different landscapes of phoD-harboring bacteria between soils and sediments.•Electrical conductivity shaping taxonomic and phylogenetic α-diversities.•Ecological processes drive biogeography of phoD-harboring bacteria.
Deciphering biogeographical patterns of alkaline phosphatase (phoD)-harboring bacteria is essential to understand organic phosphorus mineralization. However, it is poorly understood about distribution pattern and diversity maintenance mechanisms of phoD-harboring bacteria (PHB) in watershed ecosystems. Here, we estimated ecological processes shaping landscape of PHB in soils and sediments along the Yangtze River. The PHB community similarity decayed against higher geographical distance at taxonomic and phylogenetic levels, and larger compositional variation in PHB community were found in sediments only. The PHB displayed higher α-diversities, broader environmental breadths, higher community stability, and stronger species replacement in soils. Conversely, PHB showed stronger phylogenetic signals in sediments. Stochastic and differentiating processes dominated community assemblies of PHB in both soils and sediments. Electrical conductivity displayed decisive roles in shaping PHB diversity for soils and sediments at taxonomic and phylogenetic levels. Our results emphasized differences in distribution patterns of PHB between soils and sediments, and highlighted ecological processes shaping landscapes of PHB in soils and sediments along the Yangtze River. The phosphorus cycling-related findings might be helpful to estimate ecological potential of a watershed ecosystem and could provide new insights for ecological protection policy for the Yangtze River. |
doi_str_mv | 10.1016/j.ecolind.2023.110447 |
format | article |
fullrecord | <record><control><sourceid>elsevier_doaj_</sourceid><recordid>TN_cdi_doaj_primary_oai_doaj_org_article_035b762f602942839cc8f3639fba9188</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S1470160X23005897</els_id><doaj_id>oai_doaj_org_article_035b762f602942839cc8f3639fba9188</doaj_id><sourcerecordid>S1470160X23005897</sourcerecordid><originalsourceid>FETCH-LOGICAL-c370t-8ec40f71d57b606c05abcbf19361aa0bd40231f7735939ff5cf2cfe74e8f14e43</originalsourceid><addsrcrecordid>eNqFkNtKAzEQhhdRsFYfQcgLbE022WT3SqSeCgXBA-hVSLKTNmW7KUmo6NOb2uKtV5kM83_MfEVxSfCEYMKvVhMwvndDN6lwRSeEYMbEUTEijahKgSk7zjUTuCQcv58WZzGucM61LR8V_ctGJad61DlrIcBgALkBbZb-tlyqoH1wwwJpZRKE3Vivhi4atQGkIX0CDCh610eU2yhC59YwpPzrfU6lJaAPNSzSN6Bnt4VwXpxY1Ue4OLzj4u3-7nX6WM6fHmbTm3lpqMCpbMAwbAXpaqE55gbXShttSUs5UQrrjuUziRWC1i1tra2NrYwFwaCxhAGj42K253ZereQmuLUKX9IrJ38bPiykCsmZHiSmtRa8shxXLasa2hrTWMozVquWNE1m1XuWCT7GAPaPR7Dc6ZcredAvd_rlXn_OXe9zkA_dOggyGrfT27kAJuVN3D-EH5dvkeE</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Spatial difference in phoD-harboring bacterial landscape between soils and sediments along the Yangtze River</title><source>ScienceDirect Freedom Collection</source><creator>Yang, Yuyi ; Michael Gadd, Geoffrey ; Gu, Ji-Dong ; Zhang, Weihong ; Zhang, Quanfa ; Liu, Wenzhi ; Wan, Wenjie</creator><creatorcontrib>Yang, Yuyi ; Michael Gadd, Geoffrey ; Gu, Ji-Dong ; Zhang, Weihong ; Zhang, Quanfa ; Liu, Wenzhi ; Wan, Wenjie</creatorcontrib><description>[Display omitted]
•Higher alkaline phosphatase activity was found for sediments rather than soils.•Community similarity decayed against higher geographical distance.•Different landscapes of phoD-harboring bacteria between soils and sediments.•Electrical conductivity shaping taxonomic and phylogenetic α-diversities.•Ecological processes drive biogeography of phoD-harboring bacteria.
Deciphering biogeographical patterns of alkaline phosphatase (phoD)-harboring bacteria is essential to understand organic phosphorus mineralization. However, it is poorly understood about distribution pattern and diversity maintenance mechanisms of phoD-harboring bacteria (PHB) in watershed ecosystems. Here, we estimated ecological processes shaping landscape of PHB in soils and sediments along the Yangtze River. The PHB community similarity decayed against higher geographical distance at taxonomic and phylogenetic levels, and larger compositional variation in PHB community were found in sediments only. The PHB displayed higher α-diversities, broader environmental breadths, higher community stability, and stronger species replacement in soils. Conversely, PHB showed stronger phylogenetic signals in sediments. Stochastic and differentiating processes dominated community assemblies of PHB in both soils and sediments. Electrical conductivity displayed decisive roles in shaping PHB diversity for soils and sediments at taxonomic and phylogenetic levels. Our results emphasized differences in distribution patterns of PHB between soils and sediments, and highlighted ecological processes shaping landscapes of PHB in soils and sediments along the Yangtze River. The phosphorus cycling-related findings might be helpful to estimate ecological potential of a watershed ecosystem and could provide new insights for ecological protection policy for the Yangtze River.</description><identifier>ISSN: 1470-160X</identifier><identifier>EISSN: 1872-7034</identifier><identifier>DOI: 10.1016/j.ecolind.2023.110447</identifier><language>eng</language><publisher>Elsevier Ltd</publisher><subject>Biogeographic distribution ; Coexistence pattern ; Environmental breadth ; Organic phosphorus mineralization ; Phylogenetic signal ; Stochastic processes</subject><ispartof>Ecological indicators, 2023-09, Vol.153, p.110447, Article 110447</ispartof><rights>2023 The Author(s)</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c370t-8ec40f71d57b606c05abcbf19361aa0bd40231f7735939ff5cf2cfe74e8f14e43</cites><orcidid>0000-0001-7150-6138</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids></links><search><creatorcontrib>Yang, Yuyi</creatorcontrib><creatorcontrib>Michael Gadd, Geoffrey</creatorcontrib><creatorcontrib>Gu, Ji-Dong</creatorcontrib><creatorcontrib>Zhang, Weihong</creatorcontrib><creatorcontrib>Zhang, Quanfa</creatorcontrib><creatorcontrib>Liu, Wenzhi</creatorcontrib><creatorcontrib>Wan, Wenjie</creatorcontrib><title>Spatial difference in phoD-harboring bacterial landscape between soils and sediments along the Yangtze River</title><title>Ecological indicators</title><description>[Display omitted]
•Higher alkaline phosphatase activity was found for sediments rather than soils.•Community similarity decayed against higher geographical distance.•Different landscapes of phoD-harboring bacteria between soils and sediments.•Electrical conductivity shaping taxonomic and phylogenetic α-diversities.•Ecological processes drive biogeography of phoD-harboring bacteria.
Deciphering biogeographical patterns of alkaline phosphatase (phoD)-harboring bacteria is essential to understand organic phosphorus mineralization. However, it is poorly understood about distribution pattern and diversity maintenance mechanisms of phoD-harboring bacteria (PHB) in watershed ecosystems. Here, we estimated ecological processes shaping landscape of PHB in soils and sediments along the Yangtze River. The PHB community similarity decayed against higher geographical distance at taxonomic and phylogenetic levels, and larger compositional variation in PHB community were found in sediments only. The PHB displayed higher α-diversities, broader environmental breadths, higher community stability, and stronger species replacement in soils. Conversely, PHB showed stronger phylogenetic signals in sediments. Stochastic and differentiating processes dominated community assemblies of PHB in both soils and sediments. Electrical conductivity displayed decisive roles in shaping PHB diversity for soils and sediments at taxonomic and phylogenetic levels. Our results emphasized differences in distribution patterns of PHB between soils and sediments, and highlighted ecological processes shaping landscapes of PHB in soils and sediments along the Yangtze River. The phosphorus cycling-related findings might be helpful to estimate ecological potential of a watershed ecosystem and could provide new insights for ecological protection policy for the Yangtze River.</description><subject>Biogeographic distribution</subject><subject>Coexistence pattern</subject><subject>Environmental breadth</subject><subject>Organic phosphorus mineralization</subject><subject>Phylogenetic signal</subject><subject>Stochastic processes</subject><issn>1470-160X</issn><issn>1872-7034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNqFkNtKAzEQhhdRsFYfQcgLbE022WT3SqSeCgXBA-hVSLKTNmW7KUmo6NOb2uKtV5kM83_MfEVxSfCEYMKvVhMwvndDN6lwRSeEYMbEUTEijahKgSk7zjUTuCQcv58WZzGucM61LR8V_ctGJad61DlrIcBgALkBbZb-tlyqoH1wwwJpZRKE3Vivhi4atQGkIX0CDCh610eU2yhC59YwpPzrfU6lJaAPNSzSN6Bnt4VwXpxY1Ue4OLzj4u3-7nX6WM6fHmbTm3lpqMCpbMAwbAXpaqE55gbXShttSUs5UQrrjuUziRWC1i1tra2NrYwFwaCxhAGj42K253ZereQmuLUKX9IrJ38bPiykCsmZHiSmtRa8shxXLasa2hrTWMozVquWNE1m1XuWCT7GAPaPR7Dc6ZcredAvd_rlXn_OXe9zkA_dOggyGrfT27kAJuVN3D-EH5dvkeE</recordid><startdate>202309</startdate><enddate>202309</enddate><creator>Yang, Yuyi</creator><creator>Michael Gadd, Geoffrey</creator><creator>Gu, Ji-Dong</creator><creator>Zhang, Weihong</creator><creator>Zhang, Quanfa</creator><creator>Liu, Wenzhi</creator><creator>Wan, Wenjie</creator><general>Elsevier Ltd</general><general>Elsevier</general><scope>6I.</scope><scope>AAFTH</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0001-7150-6138</orcidid></search><sort><creationdate>202309</creationdate><title>Spatial difference in phoD-harboring bacterial landscape between soils and sediments along the Yangtze River</title><author>Yang, Yuyi ; Michael Gadd, Geoffrey ; Gu, Ji-Dong ; Zhang, Weihong ; Zhang, Quanfa ; Liu, Wenzhi ; Wan, Wenjie</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c370t-8ec40f71d57b606c05abcbf19361aa0bd40231f7735939ff5cf2cfe74e8f14e43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Biogeographic distribution</topic><topic>Coexistence pattern</topic><topic>Environmental breadth</topic><topic>Organic phosphorus mineralization</topic><topic>Phylogenetic signal</topic><topic>Stochastic processes</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yang, Yuyi</creatorcontrib><creatorcontrib>Michael Gadd, Geoffrey</creatorcontrib><creatorcontrib>Gu, Ji-Dong</creatorcontrib><creatorcontrib>Zhang, Weihong</creatorcontrib><creatorcontrib>Zhang, Quanfa</creatorcontrib><creatorcontrib>Liu, Wenzhi</creatorcontrib><creatorcontrib>Wan, Wenjie</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>CrossRef</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Ecological indicators</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yang, Yuyi</au><au>Michael Gadd, Geoffrey</au><au>Gu, Ji-Dong</au><au>Zhang, Weihong</au><au>Zhang, Quanfa</au><au>Liu, Wenzhi</au><au>Wan, Wenjie</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Spatial difference in phoD-harboring bacterial landscape between soils and sediments along the Yangtze River</atitle><jtitle>Ecological indicators</jtitle><date>2023-09</date><risdate>2023</risdate><volume>153</volume><spage>110447</spage><pages>110447-</pages><artnum>110447</artnum><issn>1470-160X</issn><eissn>1872-7034</eissn><abstract>[Display omitted]
•Higher alkaline phosphatase activity was found for sediments rather than soils.•Community similarity decayed against higher geographical distance.•Different landscapes of phoD-harboring bacteria between soils and sediments.•Electrical conductivity shaping taxonomic and phylogenetic α-diversities.•Ecological processes drive biogeography of phoD-harboring bacteria.
Deciphering biogeographical patterns of alkaline phosphatase (phoD)-harboring bacteria is essential to understand organic phosphorus mineralization. However, it is poorly understood about distribution pattern and diversity maintenance mechanisms of phoD-harboring bacteria (PHB) in watershed ecosystems. Here, we estimated ecological processes shaping landscape of PHB in soils and sediments along the Yangtze River. The PHB community similarity decayed against higher geographical distance at taxonomic and phylogenetic levels, and larger compositional variation in PHB community were found in sediments only. The PHB displayed higher α-diversities, broader environmental breadths, higher community stability, and stronger species replacement in soils. Conversely, PHB showed stronger phylogenetic signals in sediments. Stochastic and differentiating processes dominated community assemblies of PHB in both soils and sediments. Electrical conductivity displayed decisive roles in shaping PHB diversity for soils and sediments at taxonomic and phylogenetic levels. Our results emphasized differences in distribution patterns of PHB between soils and sediments, and highlighted ecological processes shaping landscapes of PHB in soils and sediments along the Yangtze River. The phosphorus cycling-related findings might be helpful to estimate ecological potential of a watershed ecosystem and could provide new insights for ecological protection policy for the Yangtze River.</abstract><pub>Elsevier Ltd</pub><doi>10.1016/j.ecolind.2023.110447</doi><orcidid>https://orcid.org/0000-0001-7150-6138</orcidid><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1470-160X |
ispartof | Ecological indicators, 2023-09, Vol.153, p.110447, Article 110447 |
issn | 1470-160X 1872-7034 |
language | eng |
recordid | cdi_doaj_primary_oai_doaj_org_article_035b762f602942839cc8f3639fba9188 |
source | ScienceDirect Freedom Collection |
subjects | Biogeographic distribution Coexistence pattern Environmental breadth Organic phosphorus mineralization Phylogenetic signal Stochastic processes |
title | Spatial difference in phoD-harboring bacterial landscape between soils and sediments along the Yangtze River |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-08T03%3A39%3A34IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-elsevier_doaj_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Spatial%20difference%20in%20phoD-harboring%20bacterial%20landscape%20between%20soils%20and%20sediments%20along%20the%20Yangtze%20River&rft.jtitle=Ecological%20indicators&rft.au=Yang,%20Yuyi&rft.date=2023-09&rft.volume=153&rft.spage=110447&rft.pages=110447-&rft.artnum=110447&rft.issn=1470-160X&rft.eissn=1872-7034&rft_id=info:doi/10.1016/j.ecolind.2023.110447&rft_dat=%3Celsevier_doaj_%3ES1470160X23005897%3C/elsevier_doaj_%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c370t-8ec40f71d57b606c05abcbf19361aa0bd40231f7735939ff5cf2cfe74e8f14e43%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_id=info:pmid/&rfr_iscdi=true |