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How Does Lagenaria siceraria (Bottle Gourd) Metabolome Compare to Cucumis sativus (Cucumber) F. Cucurbitaceae? A Multiplex Approach of HR-UPLC/MS/MS and GC/MS Using Molecular Networking and Chemometrics
Cucurbitaceae comprises 800 species, the majority of which are known for their nutritive, economic, and health-promoting effects. This study aims at the metabolome profiling of cucumber ( ) and bottle gourd ( ) fruits in a comparative manner for the first time, considering that both species are repo...
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Published in: | Foods 2023-02, Vol.12 (4), p.771 |
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description | Cucurbitaceae comprises 800 species, the majority of which are known for their nutritive, economic, and health-promoting effects. This study aims at the metabolome profiling of cucumber (
) and bottle gourd (
) fruits in a comparative manner for the first time, considering that both species are reported to exhibit several in-common phytochemical classes and bioactivities. Nevertheless, bottle gourd is far less known and/or consumed than cucumber, which is famous worldwide. A multiplex approach, including HR-UPLC/MS/MS, GNPS networking, SPME, and GC/MS, was employed to profile primary and secondary metabolites in both species that could mediate for new health and nutritive aspects, in addition to their aroma profiling, which affects the consumers' preferences. Spectroscopic datasets were analyzed using multivariate data analyses (PCA and OPLS) for assigning biomarkers that distinguish each fruit. Herein, 107 metabolites were annotated in cucumber and bottle gourd fruits via HR-UPLC/MS/MS analysis in both modes, aided by GNPS networking. Metabolites belong to amino acids, organic acids, cinnamates, alkaloids, flavonoids, pterocarpans, alkyl glycosides, sesquiterpenes, saponins, lignans, fatty acids/amides, and lysophospholipids, including several first-time reported metabolites and classes in Cucurbitaceae. Aroma profiling detected 93 volatiles presented at comparable levels in both species, from which it can be inferred that bottle gourds possess a consumer-pleasant aroma, although data analyses detected further enrichment of bottle gourd with ketones and esters versus aldehydes in cucumber. GC/MS analysis of silylated compounds detected 49 peaks in both species, including alcohols, amino acids, fatty acids/esters, nitrogenous compounds, organic acids, phenolic acids, steroids, and sugars, from which data analyses recognized that the bottle gourd was further enriched with fatty acids in contrast to higher sugar levels in cucumber. This study provides new possible attributes for both species in nutrition and health-care fields based on the newly detected metabolites, and further highlights the potential of the less famous fruit "bottle gourd", recommending its propagation. |
doi_str_mv | 10.3390/foods12040771 |
format | article |
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) and bottle gourd (
) fruits in a comparative manner for the first time, considering that both species are reported to exhibit several in-common phytochemical classes and bioactivities. Nevertheless, bottle gourd is far less known and/or consumed than cucumber, which is famous worldwide. A multiplex approach, including HR-UPLC/MS/MS, GNPS networking, SPME, and GC/MS, was employed to profile primary and secondary metabolites in both species that could mediate for new health and nutritive aspects, in addition to their aroma profiling, which affects the consumers' preferences. Spectroscopic datasets were analyzed using multivariate data analyses (PCA and OPLS) for assigning biomarkers that distinguish each fruit. Herein, 107 metabolites were annotated in cucumber and bottle gourd fruits via HR-UPLC/MS/MS analysis in both modes, aided by GNPS networking. Metabolites belong to amino acids, organic acids, cinnamates, alkaloids, flavonoids, pterocarpans, alkyl glycosides, sesquiterpenes, saponins, lignans, fatty acids/amides, and lysophospholipids, including several first-time reported metabolites and classes in Cucurbitaceae. Aroma profiling detected 93 volatiles presented at comparable levels in both species, from which it can be inferred that bottle gourds possess a consumer-pleasant aroma, although data analyses detected further enrichment of bottle gourd with ketones and esters versus aldehydes in cucumber. GC/MS analysis of silylated compounds detected 49 peaks in both species, including alcohols, amino acids, fatty acids/esters, nitrogenous compounds, organic acids, phenolic acids, steroids, and sugars, from which data analyses recognized that the bottle gourd was further enriched with fatty acids in contrast to higher sugar levels in cucumber. This study provides new possible attributes for both species in nutrition and health-care fields based on the newly detected metabolites, and further highlights the potential of the less famous fruit "bottle gourd", recommending its propagation.</description><identifier>ISSN: 2304-8158</identifier><identifier>EISSN: 2304-8158</identifier><identifier>DOI: 10.3390/foods12040771</identifier><identifier>PMID: 36832849</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Alcohols ; Aldehydes ; Amides ; Amino acids ; Aroma ; Biomarkers ; bottle gourd ; chemometrics ; cucumber ; Cucumbers ; Cucumis sativus ; Cucurbita ; Cucurbitaceae ; Data analysis ; Discriminant analysis ; Esters ; Fatty acids ; Flavonoids ; Food science ; Fruits ; Glycosides ; Gourds ; Health promotion ; Horticulture ; Ions ; Ketones ; Lagenaria siceraria ; Libraries ; Lignans ; Metabolites ; Multiplexing ; Multivariate analysis ; Natural products ; Networking ; Organic acids ; Phenolic acids ; Phenols ; Phytochemicals ; Principal components analysis ; Saponins ; Secondary metabolites ; Sesquiterpenes ; Software ; Solid phase methods ; Species ; Steroid hormones ; Sugar ; Vegetables ; Volatile compounds ; Volatiles</subject><ispartof>Foods, 2023-02, Vol.12 (4), p.771</ispartof><rights>2023 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2023 by the authors. 2023</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c411t-3c5089f667b50a0fdf8f4d0b3f8d97492d0d3889758a5eed63c28688fdb8e9783</citedby><cites>FETCH-LOGICAL-c411t-3c5089f667b50a0fdf8f4d0b3f8d97492d0d3889758a5eed63c28688fdb8e9783</cites><orcidid>0000-0002-3085-5865 ; 0000-0001-5139-1863 ; 0000-0003-0245-1406</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2779453531/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2779453531?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36832849$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>El-Akad, Radwa H</creatorcontrib><creatorcontrib>El-Din, Mohamed G Sharaf</creatorcontrib><creatorcontrib>Farag, Mohamed A</creatorcontrib><title>How Does Lagenaria siceraria (Bottle Gourd) Metabolome Compare to Cucumis sativus (Cucumber) F. Cucurbitaceae? A Multiplex Approach of HR-UPLC/MS/MS and GC/MS Using Molecular Networking and Chemometrics</title><title>Foods</title><addtitle>Foods</addtitle><description>Cucurbitaceae comprises 800 species, the majority of which are known for their nutritive, economic, and health-promoting effects. This study aims at the metabolome profiling of cucumber (
) and bottle gourd (
) fruits in a comparative manner for the first time, considering that both species are reported to exhibit several in-common phytochemical classes and bioactivities. Nevertheless, bottle gourd is far less known and/or consumed than cucumber, which is famous worldwide. A multiplex approach, including HR-UPLC/MS/MS, GNPS networking, SPME, and GC/MS, was employed to profile primary and secondary metabolites in both species that could mediate for new health and nutritive aspects, in addition to their aroma profiling, which affects the consumers' preferences. Spectroscopic datasets were analyzed using multivariate data analyses (PCA and OPLS) for assigning biomarkers that distinguish each fruit. Herein, 107 metabolites were annotated in cucumber and bottle gourd fruits via HR-UPLC/MS/MS analysis in both modes, aided by GNPS networking. Metabolites belong to amino acids, organic acids, cinnamates, alkaloids, flavonoids, pterocarpans, alkyl glycosides, sesquiterpenes, saponins, lignans, fatty acids/amides, and lysophospholipids, including several first-time reported metabolites and classes in Cucurbitaceae. Aroma profiling detected 93 volatiles presented at comparable levels in both species, from which it can be inferred that bottle gourds possess a consumer-pleasant aroma, although data analyses detected further enrichment of bottle gourd with ketones and esters versus aldehydes in cucumber. GC/MS analysis of silylated compounds detected 49 peaks in both species, including alcohols, amino acids, fatty acids/esters, nitrogenous compounds, organic acids, phenolic acids, steroids, and sugars, from which data analyses recognized that the bottle gourd was further enriched with fatty acids in contrast to higher sugar levels in cucumber. This study provides new possible attributes for both species in nutrition and health-care fields based on the newly detected metabolites, and further highlights the potential of the less famous fruit "bottle gourd", recommending its propagation.</description><subject>Alcohols</subject><subject>Aldehydes</subject><subject>Amides</subject><subject>Amino acids</subject><subject>Aroma</subject><subject>Biomarkers</subject><subject>bottle gourd</subject><subject>chemometrics</subject><subject>cucumber</subject><subject>Cucumbers</subject><subject>Cucumis sativus</subject><subject>Cucurbita</subject><subject>Cucurbitaceae</subject><subject>Data analysis</subject><subject>Discriminant analysis</subject><subject>Esters</subject><subject>Fatty acids</subject><subject>Flavonoids</subject><subject>Food science</subject><subject>Fruits</subject><subject>Glycosides</subject><subject>Gourds</subject><subject>Health promotion</subject><subject>Horticulture</subject><subject>Ions</subject><subject>Ketones</subject><subject>Lagenaria siceraria</subject><subject>Libraries</subject><subject>Lignans</subject><subject>Metabolites</subject><subject>Multiplexing</subject><subject>Multivariate analysis</subject><subject>Natural products</subject><subject>Networking</subject><subject>Organic acids</subject><subject>Phenolic acids</subject><subject>Phenols</subject><subject>Phytochemicals</subject><subject>Principal components analysis</subject><subject>Saponins</subject><subject>Secondary metabolites</subject><subject>Sesquiterpenes</subject><subject>Software</subject><subject>Solid phase methods</subject><subject>Species</subject><subject>Steroid hormones</subject><subject>Sugar</subject><subject>Vegetables</subject><subject>Volatile compounds</subject><subject>Volatiles</subject><issn>2304-8158</issn><issn>2304-8158</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNpdUtFu0zAUjRCITWOPvCJLvHQP2Zw4ie0XUAmsndQCAvocOfZN65LGme1s8It8FU47phXL0r0-9-j42PdG0esEXxLC8VVjjHJJijNMafIsOk0JzmKW5Oz5k_wkOndui8PiCWEkfRmdkCJElvHT6M_c3KOPBhxaiDV0wmqBnJZg99nkg_G-BTQzg1UXaAle1KY1O0Cl2fXCAvIGlYMcdtohJ7y-Gxya7IEa7AW6vtxXba29kCDgPZqi5dB63bfwC0373hohN8g0aP4tXn1dlFfL72Ej0Sk0Gw9o5XS3RkvTghxaYdFn8PfG_hzBkVRuYBfseKulexW9aETr4PwhnkWr608_ynm8-DK7KaeLWGZJ4mMic8x4UxS0zrHAjWpYkylck4YpTjOeKqwIY5zmTOQAqiAyZQVjjaoZcMrIWXRz0FVGbKve6p2wvysjdLUHjF1XwnotW6gwASp5kydBL8vTRmBBCIy3ElbTnAStdwetfqh3oCR03or2SPS40ulNtTZ3Fed5QTIaBCYPAtbcDuB8FVohoW1FB2ZwVUoZxjTh2ej77X_UbWhrF74qsGjwR3KSBFZ8YElrnLPQPJpJcDUOXXU0dIH_5ukLHtn_Roz8BYTl018</recordid><startdate>20230210</startdate><enddate>20230210</enddate><creator>El-Akad, Radwa H</creator><creator>El-Din, Mohamed G Sharaf</creator><creator>Farag, Mohamed A</creator><general>MDPI AG</general><general>MDPI</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QR</scope><scope>7T7</scope><scope>7X2</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>HCIFZ</scope><scope>M0K</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-3085-5865</orcidid><orcidid>https://orcid.org/0000-0001-5139-1863</orcidid><orcidid>https://orcid.org/0000-0003-0245-1406</orcidid></search><sort><creationdate>20230210</creationdate><title>How Does Lagenaria siceraria (Bottle Gourd) Metabolome Compare to Cucumis sativus (Cucumber) F. Cucurbitaceae? A Multiplex Approach of HR-UPLC/MS/MS and GC/MS Using Molecular Networking and Chemometrics</title><author>El-Akad, Radwa H ; El-Din, Mohamed G Sharaf ; Farag, Mohamed A</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c411t-3c5089f667b50a0fdf8f4d0b3f8d97492d0d3889758a5eed63c28688fdb8e9783</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Alcohols</topic><topic>Aldehydes</topic><topic>Amides</topic><topic>Amino acids</topic><topic>Aroma</topic><topic>Biomarkers</topic><topic>bottle gourd</topic><topic>chemometrics</topic><topic>cucumber</topic><topic>Cucumbers</topic><topic>Cucumis sativus</topic><topic>Cucurbita</topic><topic>Cucurbitaceae</topic><topic>Data analysis</topic><topic>Discriminant analysis</topic><topic>Esters</topic><topic>Fatty acids</topic><topic>Flavonoids</topic><topic>Food science</topic><topic>Fruits</topic><topic>Glycosides</topic><topic>Gourds</topic><topic>Health promotion</topic><topic>Horticulture</topic><topic>Ions</topic><topic>Ketones</topic><topic>Lagenaria siceraria</topic><topic>Libraries</topic><topic>Lignans</topic><topic>Metabolites</topic><topic>Multiplexing</topic><topic>Multivariate analysis</topic><topic>Natural products</topic><topic>Networking</topic><topic>Organic acids</topic><topic>Phenolic acids</topic><topic>Phenols</topic><topic>Phytochemicals</topic><topic>Principal components analysis</topic><topic>Saponins</topic><topic>Secondary metabolites</topic><topic>Sesquiterpenes</topic><topic>Software</topic><topic>Solid phase methods</topic><topic>Species</topic><topic>Steroid hormones</topic><topic>Sugar</topic><topic>Vegetables</topic><topic>Volatile compounds</topic><topic>Volatiles</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>El-Akad, Radwa H</creatorcontrib><creatorcontrib>El-Din, Mohamed G Sharaf</creatorcontrib><creatorcontrib>Farag, Mohamed A</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Chemoreception Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Agricultural Science Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>SciTech Premium Collection</collection><collection>Agriculture Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Foods</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>El-Akad, Radwa H</au><au>El-Din, Mohamed G Sharaf</au><au>Farag, Mohamed A</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>How Does Lagenaria siceraria (Bottle Gourd) Metabolome Compare to Cucumis sativus (Cucumber) F. Cucurbitaceae? A Multiplex Approach of HR-UPLC/MS/MS and GC/MS Using Molecular Networking and Chemometrics</atitle><jtitle>Foods</jtitle><addtitle>Foods</addtitle><date>2023-02-10</date><risdate>2023</risdate><volume>12</volume><issue>4</issue><spage>771</spage><pages>771-</pages><issn>2304-8158</issn><eissn>2304-8158</eissn><abstract>Cucurbitaceae comprises 800 species, the majority of which are known for their nutritive, economic, and health-promoting effects. This study aims at the metabolome profiling of cucumber (
) and bottle gourd (
) fruits in a comparative manner for the first time, considering that both species are reported to exhibit several in-common phytochemical classes and bioactivities. Nevertheless, bottle gourd is far less known and/or consumed than cucumber, which is famous worldwide. A multiplex approach, including HR-UPLC/MS/MS, GNPS networking, SPME, and GC/MS, was employed to profile primary and secondary metabolites in both species that could mediate for new health and nutritive aspects, in addition to their aroma profiling, which affects the consumers' preferences. Spectroscopic datasets were analyzed using multivariate data analyses (PCA and OPLS) for assigning biomarkers that distinguish each fruit. Herein, 107 metabolites were annotated in cucumber and bottle gourd fruits via HR-UPLC/MS/MS analysis in both modes, aided by GNPS networking. Metabolites belong to amino acids, organic acids, cinnamates, alkaloids, flavonoids, pterocarpans, alkyl glycosides, sesquiterpenes, saponins, lignans, fatty acids/amides, and lysophospholipids, including several first-time reported metabolites and classes in Cucurbitaceae. Aroma profiling detected 93 volatiles presented at comparable levels in both species, from which it can be inferred that bottle gourds possess a consumer-pleasant aroma, although data analyses detected further enrichment of bottle gourd with ketones and esters versus aldehydes in cucumber. GC/MS analysis of silylated compounds detected 49 peaks in both species, including alcohols, amino acids, fatty acids/esters, nitrogenous compounds, organic acids, phenolic acids, steroids, and sugars, from which data analyses recognized that the bottle gourd was further enriched with fatty acids in contrast to higher sugar levels in cucumber. This study provides new possible attributes for both species in nutrition and health-care fields based on the newly detected metabolites, and further highlights the potential of the less famous fruit "bottle gourd", recommending its propagation.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>36832849</pmid><doi>10.3390/foods12040771</doi><orcidid>https://orcid.org/0000-0002-3085-5865</orcidid><orcidid>https://orcid.org/0000-0001-5139-1863</orcidid><orcidid>https://orcid.org/0000-0003-0245-1406</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Alcohols Aldehydes Amides Amino acids Aroma Biomarkers bottle gourd chemometrics cucumber Cucumbers Cucumis sativus Cucurbita Cucurbitaceae Data analysis Discriminant analysis Esters Fatty acids Flavonoids Food science Fruits Glycosides Gourds Health promotion Horticulture Ions Ketones Lagenaria siceraria Libraries Lignans Metabolites Multiplexing Multivariate analysis Natural products Networking Organic acids Phenolic acids Phenols Phytochemicals Principal components analysis Saponins Secondary metabolites Sesquiterpenes Software Solid phase methods Species Steroid hormones Sugar Vegetables Volatile compounds Volatiles |
title | How Does Lagenaria siceraria (Bottle Gourd) Metabolome Compare to Cucumis sativus (Cucumber) F. Cucurbitaceae? A Multiplex Approach of HR-UPLC/MS/MS and GC/MS Using Molecular Networking and Chemometrics |
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