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Genotyping of Toxoplasma gondii Isolates from Soil Samples in Tehran, Iran
The protozoan parasite Toxoplasma gondii can infect any warm blooded nucleated cells. One of the ways for human infection is ingestion of oocysts directly from soil or via infected fruits or vegetables. To survey the potential role of T. gondii oocyst in soil samples, the present study was conducted...
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Published in: | Iranian journal of parasitology 2013-04, Vol.8 (2), p.227-233 |
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creator | Tavalla, M Oormazdi, H Akhlaghi, L Shojaee, S Razmjou, E Hadighi, R Meamar, Ar |
description | The protozoan parasite Toxoplasma gondii can infect any warm blooded nucleated cells. One of the ways for human infection is ingestion of oocysts directly from soil or via infected fruits or vegetables. To survey the potential role of T. gondii oocyst in soil samples, the present study was conducted in Tehran City, Iran.
A total of 150 soil samples were collected around rubbish dumps, children's play ground, parks and public places. Oocysts recovery was performed by sodium nitrate flotation method on soil samples. For molecular detection, PCR reaction targeting B1 gene was performed and then, the positive results were confirmed using repetitive 529 bp DNA fragment in other PCR reaction. Finally, the positive samples were genotyped at the SAG2 locus.
Toxoplasma DNA was found in 13 soil samples. After genotyping and RFLP analysis in SAG2 locus, nine positive samples were revealed type III, one positive sample was type I whereas three samples revealed mixed infection (type, I & III).
The predominant genotype in Tehran soil samples is type III. |
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A total of 150 soil samples were collected around rubbish dumps, children's play ground, parks and public places. Oocysts recovery was performed by sodium nitrate flotation method on soil samples. For molecular detection, PCR reaction targeting B1 gene was performed and then, the positive results were confirmed using repetitive 529 bp DNA fragment in other PCR reaction. Finally, the positive samples were genotyped at the SAG2 locus.
Toxoplasma DNA was found in 13 soil samples. After genotyping and RFLP analysis in SAG2 locus, nine positive samples were revealed type III, one positive sample was type I whereas three samples revealed mixed infection (type, I & III).
The predominant genotype in Tehran soil samples is type III.</description><identifier>ISSN: 1735-7020</identifier><identifier>EISSN: 2008-238X</identifier><identifier>PMID: 23914235</identifier><language>eng</language><publisher>Iran: Tehran University of Medical Sciences</publisher><subject>Cysts ; Enzymes ; Epidemiology ; Genotype ; Genotype & phenotype ; Iran ; Methods ; Microbiology ; Original ; Parasites ; SAG2 ; Soil ; Toxoplasma gondii</subject><ispartof>Iranian journal of parasitology, 2013-04, Vol.8 (2), p.227-233</ispartof><rights>Copyright Dr Ali Akbari Sari, Director of The Commission for Accreditation & Improvement of Iranian Medical Journals Apr-Jun 2013</rights><rights>2013 Iranian Society of Parasitology & Tehran University of Medical Sciences 2013</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1440188006/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1440188006?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23914235$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Tavalla, M</creatorcontrib><creatorcontrib>Oormazdi, H</creatorcontrib><creatorcontrib>Akhlaghi, L</creatorcontrib><creatorcontrib>Shojaee, S</creatorcontrib><creatorcontrib>Razmjou, E</creatorcontrib><creatorcontrib>Hadighi, R</creatorcontrib><creatorcontrib>Meamar, Ar</creatorcontrib><title>Genotyping of Toxoplasma gondii Isolates from Soil Samples in Tehran, Iran</title><title>Iranian journal of parasitology</title><addtitle>Iran J Parasitol</addtitle><description>The protozoan parasite Toxoplasma gondii can infect any warm blooded nucleated cells. One of the ways for human infection is ingestion of oocysts directly from soil or via infected fruits or vegetables. To survey the potential role of T. gondii oocyst in soil samples, the present study was conducted in Tehran City, Iran.
A total of 150 soil samples were collected around rubbish dumps, children's play ground, parks and public places. Oocysts recovery was performed by sodium nitrate flotation method on soil samples. For molecular detection, PCR reaction targeting B1 gene was performed and then, the positive results were confirmed using repetitive 529 bp DNA fragment in other PCR reaction. Finally, the positive samples were genotyped at the SAG2 locus.
Toxoplasma DNA was found in 13 soil samples. After genotyping and RFLP analysis in SAG2 locus, nine positive samples were revealed type III, one positive sample was type I whereas three samples revealed mixed infection (type, I & III).
The predominant genotype in Tehran soil samples is type III.</description><subject>Cysts</subject><subject>Enzymes</subject><subject>Epidemiology</subject><subject>Genotype</subject><subject>Genotype & phenotype</subject><subject>Iran</subject><subject>Methods</subject><subject>Microbiology</subject><subject>Original</subject><subject>Parasites</subject><subject>SAG2</subject><subject>Soil</subject><subject>Toxoplasma gondii</subject><issn>1735-7020</issn><issn>2008-238X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNpdkU9rFTEUxQdR7KP2K0jAjQsH8m8ymY0gRdsnBRd9he7CzeTOax6ZZEzmif32praK9S4SODn8cjj3RbPhlOqWC337stmwXnRtTzk9ac5KOdA6gmul1OvmhIuBSS66TfP1AmNa7xcf9yRNZJd-piVAmYHsU3Tek21JAVYsZMppJtfJB3IN8xKq4iPZ4V2G-IFs6_mmeTVBKHj2dJ82N18-784v26tvF9vzT1etE4qureXAAKmbmOzQIjI6StZ3YuBOKhz4VHP1o7AKtEWnrOyhik6Dc0MnQIrTZvvIdQkOZsl-hnxvEnjzW0h5byCvfgxoaCcHiVM3ajFJpgdtO2qBu3G0PVJrK-vjI2s52hndiHHNEJ5Bn79Ef2f26YcRPZdM9hXw_gmQ0_cjltXMvowYAkRMx2JY_bZWrfhD7nf_WQ_pmGOtqrokZVpTqqrr7b-J_kb5szLxC3iQlFM</recordid><startdate>20130401</startdate><enddate>20130401</enddate><creator>Tavalla, M</creator><creator>Oormazdi, H</creator><creator>Akhlaghi, L</creator><creator>Shojaee, S</creator><creator>Razmjou, E</creator><creator>Hadighi, R</creator><creator>Meamar, Ar</creator><general>Tehran University of Medical Sciences</general><scope>NPM</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>8C1</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>CWDGH</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>K9.</scope><scope>M0S</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20130401</creationdate><title>Genotyping of Toxoplasma gondii Isolates from Soil Samples in Tehran, Iran</title><author>Tavalla, M ; Oormazdi, H ; Akhlaghi, L ; Shojaee, S ; Razmjou, E ; Hadighi, R ; Meamar, Ar</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-d360t-b2a1ae0df145ebee10c4175392d46e92f2357c3b6a8bed6b47a92fd8add953a43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Cysts</topic><topic>Enzymes</topic><topic>Epidemiology</topic><topic>Genotype</topic><topic>Genotype & phenotype</topic><topic>Iran</topic><topic>Methods</topic><topic>Microbiology</topic><topic>Original</topic><topic>Parasites</topic><topic>SAG2</topic><topic>Soil</topic><topic>Toxoplasma gondii</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Tavalla, M</creatorcontrib><creatorcontrib>Oormazdi, H</creatorcontrib><creatorcontrib>Akhlaghi, L</creatorcontrib><creatorcontrib>Shojaee, S</creatorcontrib><creatorcontrib>Razmjou, E</creatorcontrib><creatorcontrib>Hadighi, R</creatorcontrib><creatorcontrib>Meamar, Ar</creatorcontrib><collection>PubMed</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Public Health Database</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>Middle East & Africa Database</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Publicly Available Content (ProQuest)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Iranian journal of parasitology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Tavalla, M</au><au>Oormazdi, H</au><au>Akhlaghi, L</au><au>Shojaee, S</au><au>Razmjou, E</au><au>Hadighi, R</au><au>Meamar, Ar</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genotyping of Toxoplasma gondii Isolates from Soil Samples in Tehran, Iran</atitle><jtitle>Iranian journal of parasitology</jtitle><addtitle>Iran J Parasitol</addtitle><date>2013-04-01</date><risdate>2013</risdate><volume>8</volume><issue>2</issue><spage>227</spage><epage>233</epage><pages>227-233</pages><issn>1735-7020</issn><eissn>2008-238X</eissn><abstract>The protozoan parasite Toxoplasma gondii can infect any warm blooded nucleated cells. One of the ways for human infection is ingestion of oocysts directly from soil or via infected fruits or vegetables. To survey the potential role of T. gondii oocyst in soil samples, the present study was conducted in Tehran City, Iran.
A total of 150 soil samples were collected around rubbish dumps, children's play ground, parks and public places. Oocysts recovery was performed by sodium nitrate flotation method on soil samples. For molecular detection, PCR reaction targeting B1 gene was performed and then, the positive results were confirmed using repetitive 529 bp DNA fragment in other PCR reaction. Finally, the positive samples were genotyped at the SAG2 locus.
Toxoplasma DNA was found in 13 soil samples. After genotyping and RFLP analysis in SAG2 locus, nine positive samples were revealed type III, one positive sample was type I whereas three samples revealed mixed infection (type, I & III).
The predominant genotype in Tehran soil samples is type III.</abstract><cop>Iran</cop><pub>Tehran University of Medical Sciences</pub><pmid>23914235</pmid><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Cysts Enzymes Epidemiology Genotype Genotype & phenotype Iran Methods Microbiology Original Parasites SAG2 Soil Toxoplasma gondii |
title | Genotyping of Toxoplasma gondii Isolates from Soil Samples in Tehran, Iran |
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