The association of genetic polymorphisms with nonalcoholic fatty liver disease in a longitudinal study

• Published in: BMC gastroenterology 2020-10, Vol.20 (1), p.344-344, Article 344
• Main Authors: Chung, Goh Eun, Shin, Eunsoon, Kwak, Min-Sun, In Yang, Jong, Lee, Jong-Eun, Choe, Eun Kyung, Yim, Jeong Yoon
• Format: Article
• Language: English
• Subjects: Blood pressure; Body Mass Index; Cholesterol; Deoxyribonucleic acid; DNA; Fasting; Fatty liver; Female; Gastroenterology; Gene polymorphism; Genetic diversity; Genome-wide association studies; Genome-Wide Association Study; Genomes; Glucose; Hepatitis; Humans; Laboratories; Liver diseases; Longitudinal Studies; Male; Males; Middle Aged; Mortality; Non-alcoholic Fatty Liver Disease - diagnostic imaging; Non-alcoholic Fatty Liver Disease - genetics; Nonalcoholic fatty liver disease; Polymorphism, Single Nucleotide; Population; Quality control; Single-nucleotide polymorphism; Software; Triglycerides; Ultrasonic imaging
• ISSN: 1471-230X; 1471-230X
• DOI: 10.1186/s12876-020-01469-8

Several genetic variants are known to be associated with nonalcoholic fatty liver disease (NAFLD). We aimed to evaluate the longitudinal associations between genetic variants and NAFLD. We performed a genome-wide association study (GWAS) in Korean individuals who underwent repeated health check-ups. NAFLD was defined by ultrasonography and exclusion of secondary causes. The subjects had a median age of 50.0 years, and 54.8% were male. The median follow-up duration was 39 months. Among the 3905 subjects without NAFLD at baseline, 874 (22.4%) subjects developed NAFLD, and among the 1818 subjects with NAFLD at baseline, NAFLD regressed in 336 (18.5%) subjects during the follow-up period. After adjusting for age, sex and body mass index, no single-nucleotide polymorphism (SNP) passed Bonferroni correction for genome-wide significance in the development or regression of NAFLD. Among the SNPs that passed the genome-wide suggestiveness threshold (p = 1E-04) in the discovery set in the GWAS, only 1 SNP (rs4906353) showed an association with the development of NAFLD, with marginal significance in the validation set (p-value, discovery set = 9.68E-5 and validation set = 0.00531). This exploratory study suggests that longitudinal changes in NAFLD are not associated with genetic variants in the Korean population. These findings provide new insight into genetic mechanisms in the pathogenesis of NAFLD.